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  1. Article ; Online: R-miniCHOP versus R-CHOP in elderly patients with diffuse large B-cell lymphoma: A propensity matched population-based study.

    Al-Sarayfi, D / Brink, M / Chamuleau, M E D / Brouwer, R / van Rijn, R S / Issa, D / Deenik, W / Huls, G / Mous, R / Vermaat, J S P / Diepstra, A / Zijlstra, J M / van Meerten, T / Nijland, M

    American journal of hematology

    2023  Volume 99, Issue 2, Page(s) 216–222

    Abstract: ... immunotherapy strategy of rituximab, cyclophosphamide, doxorubicin, vincristine and prednisolone (R-miniCHOP ... was introduced as a treatment option as from 2014 onward in the Netherlands. Although R-miniCHOP is ... more tolerable, reduction of chemotherapy could negatively affect survival compared to R-CHOP. The aim ...

    Abstract For elderly frail patients with diffuse large B-cell lymphoma (DLBCL), an attenuated chemo-immunotherapy strategy of rituximab, cyclophosphamide, doxorubicin, vincristine and prednisolone (R-miniCHOP) was introduced as a treatment option as from 2014 onward in the Netherlands. Although R-miniCHOP is more tolerable, reduction of chemotherapy could negatively affect survival compared to R-CHOP. The aim of this analysis was to assess survival of patients treated with R-miniCHOP compared to R-CHOP. DLBCL patients ≥65 years, newly diagnosed in 2014-2020, who received ≥1 cycle of R-miniCHOP or R-CHOP were identified in the Netherlands Cancer Registry, with survival follow-up through 2022. Patients were propensity-score-matched for baseline characteristics. Main endpoints were progression-free survival (PFS), overall survival (OS), and relative survival (RS). The use of R-miniCHOP in DLBCL increased from 2% in 2014 to 15% in 2020. In total, 384 patients treated with R-miniCHOP and 384 patients treated with R-CHOP were included for comparison (median age; 81 years, stage 3-4; 68%). The median number of R-(mini)CHOP cycles was 6 (range, 1-8). The 2-year PFS, OS and RS were inferior for patients treated with R-miniCHOP compared to R-CHOP (PFS 51% vs. 68%, p < .01; OS 60% vs. 75%, p < .01; RS 69% vs. 86%, p < .01). In multivariable analysis, patients treated with R-miniCHOP had higher risk of all-cause mortality compared to patients treated with R-CHOP (HR 1.73; 95%CI, 1.39-2.17). R-miniCHOP is effective for most elderly patients. Although survival is inferior compared to R-CHOP, the use of R-miniCHOP as initial treatment is increasing. Therefore, fitness needs to be carefully weighed in treatment selection.
    MeSH term(s) Humans ; Aged ; Rituximab ; Antibodies, Monoclonal, Murine-Derived/adverse effects ; Vincristine/adverse effects ; Antineoplastic Combined Chemotherapy Protocols/adverse effects ; Doxorubicin/adverse effects ; Cyclophosphamide ; Lymphoma, Large B-Cell, Diffuse ; Prednisone/adverse effects ; Treatment Outcome
    Chemical Substances Rituximab (4F4X42SYQ6) ; Antibodies, Monoclonal, Murine-Derived ; Vincristine (5J49Q6B70F) ; Doxorubicin (80168379AG) ; Cyclophosphamide (8N3DW7272P) ; Prednisone (VB0R961HZT)
    Language English
    Publishing date 2023-11-28
    Publishing country United States
    Document type Journal Article
    ZDB-ID 196767-8
    ISSN 1096-8652 ; 0361-8609
    ISSN (online) 1096-8652
    ISSN 0361-8609
    DOI 10.1002/ajh.27151
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Cotranscriptional R-loop formation by Mfd involves topological partitioning of DNA.

    Portman, James R / Brouwer, Gwendolyn M / Bollins, Jack / Savery, Nigel J / Strick, Terence R

    Proceedings of the National Academy of Sciences of the United States of America

    2021  Volume 118, Issue 15

    Abstract: R-loops are nucleic acid hybrids which form when an RNA invades duplex DNA to pair ... their mechanistic origins remain unclear. We here report real-time observations of cotranscriptional R-loop ... and forms a stable R-loop that can drive mutagenesis. This mechanism theoretically enables any protein ...

    Abstract R-loops are nucleic acid hybrids which form when an RNA invades duplex DNA to pair with its template sequence. Although they are implicated in a growing number of gene regulatory processes, their mechanistic origins remain unclear. We here report real-time observations of cotranscriptional R-loop formation at single-molecule resolution and propose a mechanism for their formation. We show that the bacterial Mfd protein can simultaneously interact with both elongating RNA polymerase and upstream DNA, tethering the two together and partitioning the DNA into distinct supercoiled domains. A highly negatively supercoiled domain forms in between Mfd and RNA polymerase, and compensatory positive supercoiling appears in front of the RNA polymerase and behind Mfd. The nascent RNA invades the negatively supercoiled domain and forms a stable R-loop that can drive mutagenesis. This mechanism theoretically enables any protein that simultaneously binds an actively translocating RNA polymerase and upstream DNA to stimulate R-loop formation.
    MeSH term(s) Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; DNA-Directed RNA Polymerases/metabolism ; Escherichia coli ; Mutation ; R-Loop Structures ; Single Molecule Imaging ; Transcription Factors/genetics ; Transcription Factors/metabolism ; Transcription, Genetic
    Chemical Substances Bacterial Proteins ; Transcription Factors ; transcription repair coupling factor protein, Bacteria ; DNA-Directed RNA Polymerases (EC 2.7.7.6)
    Language English
    Publishing date 2021-04-08
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 209104-5
    ISSN 1091-6490 ; 0027-8424
    ISSN (online) 1091-6490
    ISSN 0027-8424
    DOI 10.1073/pnas.2019630118
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: No sex differential in relative survival among older patients with DLBCL treated with R-CHOP21: a population-based study.

    Geerdes, Emma E / Durmaz, Müjde / Lugtenburg, Pieternella J / Chamuleau, Martine E D / Visser, Otto / Issa, Djamila E / Brouwer, Rolf E / Posthuma, Eduardus F M / Zijlstra, Josée M / Kersten, Marie José / Dinmohamed, Avinash G

    Blood advances

    2023  Volume 7, Issue 17, Page(s) 4869–4873

    MeSH term(s) Humans ; Lymphoma, Large B-Cell, Diffuse/drug therapy ; Male ; Female ; Aged
    Chemical Substances R-CHOP protocol
    Language English
    Publishing date 2023-07-14
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2915908-8
    ISSN 2473-9537 ; 2473-9529
    ISSN (online) 2473-9537
    ISSN 2473-9529
    DOI 10.1182/bloodadvances.2023010480
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Technologic (R)Evolution Leads to Detection of More Sentinel Nodes in Patients with Melanoma in the Head and Neck Region.

    Berger, Danique M S / van den Berg, Nynke S / van der Noort, Vincent / van der Hiel, Bernies / Valdés Olmos, Renato A / Buckle, Tessa A / KleinJan, Gijs H / Brouwer, Oscar R / Vermeeren, Lenka / Karakullukçu, Baris / van den Brekel, Michiel W M / van de Wiel, Bart A / Nieweg, Omgo E / Balm, Alfons J M / van Leeuwen, Fijs W B / Klop, W Martin C

    Journal of nuclear medicine : official publication, Society of Nuclear Medicine

    2021  Volume 62, Issue 10, Page(s) 1357–1362

    Abstract: Sentinel lymph node (SN) biopsy (SNB) has proven to be a valuable tool for staging melanoma patients. Since its introduction in the early 1990s, this procedure has undergone several technologic refinements, including the introduction of SPECT/CT, as well ...

    Abstract Sentinel lymph node (SN) biopsy (SNB) has proven to be a valuable tool for staging melanoma patients. Since its introduction in the early 1990s, this procedure has undergone several technologic refinements, including the introduction of SPECT/CT, as well as radioguidance and fluorescence guidance. The purpose of the current study was to evaluate the effect of this technologic evolution on SNB in the head and neck region. The primary endpoint was the false-negative (FN) rate. Secondary endpoints were number of harvested SNs, overall operation time, operation time per harvested SN, and postoperative complications.
    MeSH term(s) Adult ; Aged ; Humans ; Lymphoscintigraphy ; Melanoma ; Middle Aged ; Retrospective Studies ; Sentinel Lymph Node Biopsy ; Skin Neoplasms ; Melanoma, Cutaneous Malignant
    Language English
    Publishing date 2021-02-26
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 80272-4
    ISSN 1535-5667 ; 0097-9058 ; 0161-5505 ; 0022-3123
    ISSN (online) 1535-5667
    ISSN 0097-9058 ; 0161-5505 ; 0022-3123
    DOI 10.2967/jnumed.120.246819
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: R-CEOP as first-line treatment for anthracycline-ineligible patients with diffuse large B-cell lymphoma.

    Al-Sarayfi, Diana / Meeuwes, Frederik O / Durmaz, Müjde / Issa, Djamila E / Brouwer, Rolf E / Beeker, Aart / van Rhenen, Anna / Mutsaers, Pim G N J / Böhmer, Lara H / van der Poel, Marjolein W M / Te Boome, Liane / van Meerten, Tom / Chamuleau, Martine E D / Zijlstra, Josée M / Brink, Mirian / Nijland, Marcel

    Blood cancer journal

    2022  Volume 12, Issue 9, Page(s) 125

    MeSH term(s) Anthracyclines/therapeutic use ; Antineoplastic Combined Chemotherapy Protocols/adverse effects ; Cyclophosphamide/therapeutic use ; Humans ; Lymphoma, Large B-Cell, Diffuse/pathology ; Prednisone/therapeutic use ; Treatment Outcome ; Vincristine/therapeutic use
    Chemical Substances Anthracyclines ; Vincristine (5J49Q6B70F) ; Cyclophosphamide (8N3DW7272P) ; Prednisone (VB0R961HZT)
    Language English
    Publishing date 2022-09-02
    Publishing country United States
    Document type Letter
    ZDB-ID 2600560-8
    ISSN 2044-5385 ; 2044-5385
    ISSN (online) 2044-5385
    ISSN 2044-5385
    DOI 10.1038/s41408-022-00723-4
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: 3194 Workforce Engagement and Resilience (WE-R)

    Stephanie A. Freel / Christine Deeter / Deborah Hannah / Marissa Stroo / Rebecca Brouwer / Denise Snyder

    Journal of Clinical and Translational Science, Vol 3, Pp 77-

    A Framework for Innovating Clinical Research Careers

    2019  Volume 78

    Abstract: OBJECTIVES/SPECIFIC AIMS: 1.Assess changes in clinical research workforce landscape at Duke 2.Optimize and evaluate efficacy of a tier advancement process for clinical research career progression at Duke 3.Implement CRP engagement as a change management ... ...

    Abstract OBJECTIVES/SPECIFIC AIMS: 1.Assess changes in clinical research workforce landscape at Duke 2.Optimize and evaluate efficacy of a tier advancement process for clinical research career progression at Duke 3.Implement CRP engagement as a change management mechanism for workforce innovation METHODS/STUDY POPULATION: We evaluated 857 clinical research positions at Duke to understand changes in the workforce (demographics, numbers in each position and tier) since implementing the tier advancement process in 2016. To understand the efficacy of the tier assessment process, data from a subset of this population (n=84) who underwent the advancement process was examined for success rate. Individual employees and their managers were surveyed to understand their perception of the advancement process and identify areas for improvement. We also describe implementation of multiple mechanisms of community engagement to manage expectations around the tier advancement process and to provide opportunities for employees to self-manage their career planning, including portfolio planning and leadership opportunities. RESULTS/ANTICIPATED RESULTS: Whereas the clinical research workforce has grown by 5.5% since tiering began (2016, n=810; 2018 n=857). Nearly 13% of that growth has been in managerial or senior positions (2016, n=111; 2018 n=127). Distributions across job classifications changed only slightly, representing realignment of positions with study-level responsibilities over department-level responsibilities. Notably, clinical research nurses (CRNC & CRNC Sr.) was the only category including tiered and non-tiered positions to drop overall numbers between 2016 (n = 136) and 2018 (n=115), representing a shift in the workforce from research nurses to research coordinators. General demographics (gender, age) remained largely the same. A total of 359 positions have been hired during this time frame, nearly half of which were entry-level positions (175/359): 47 of these positions represent expansion of the workforce. Of 359 new ...
    Keywords Medicine ; R
    Subject code 650
    Language English
    Publishing date 2019-03-01T00:00:00Z
    Publisher Cambridge University Press
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  7. Article ; Online: Pathview: an R/Bioconductor package for pathway-based data integration and visualization.

    Luo, Weijun / Brouwer, Cory

    Bioinformatics (Oxford, England)

    2013  Volume 29, Issue 14, Page(s) 1830–1831

    Abstract: ... under the GPLv3 license through Bioconductor and R-Forge. It is available at http://bioconductor.org ... packages/release/bioc/html/pathview.html and at http://Pathview.r-forge.r-project.org/.: Contact: luo ...

    Abstract Summary: Pathview is a novel tool set for pathway-based data integration and visualization. It maps and renders user data on relevant pathway graphs. Users only need to supply their data and specify the target pathway. Pathview automatically downloads the pathway graph data, parses the data file, maps and integrates user data onto the pathway and renders pathway graphs with the mapped data. Although built as a stand-alone program, Pathview may seamlessly integrate with pathway and functional analysis tools for large-scale and fully automated analysis pipelines.
    Availability: The package is freely available under the GPLv3 license through Bioconductor and R-Forge. It is available at http://bioconductor.org/packages/release/bioc/html/pathview.html and at http://Pathview.r-forge.r-project.org/.
    Contact: luo_weijun@yahoo.com
    Supplementary information: Supplementary data are available at Bioinformatics online.
    MeSH term(s) Computer Graphics ; Gene Expression ; Metabolic Networks and Pathways ; Signal Transduction ; Software ; Systems Integration
    Language English
    Publishing date 2013-06-04
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1422668-6
    ISSN 1367-4811 ; 1367-4803
    ISSN (online) 1367-4811
    ISSN 1367-4803
    DOI 10.1093/bioinformatics/btt285
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Occupational accidents in artisanal mining in Katanga, D.R.C.

    Elenge, Myriam / Leveque, Alain / De Brouwer, Christophe

    International journal of occupational medicine and environmental health

    2013  Volume 26, Issue 2, Page(s) 265–274

    Abstract: Introduction: This study focuses on accidents in artisanal mining, to support policies improving miners' employability.: Materials and methods: Based on a questionnaire administered in November 2009 to a sample of 180 miners from the artisanal mining ...

    Abstract Introduction: This study focuses on accidents in artisanal mining, to support policies improving miners' employability.
    Materials and methods: Based on a questionnaire administered in November 2009 to a sample of 180 miners from the artisanal mining of LUPOTO, in the Province of Katanga, we explored significant trends between the accidents and their consequences and behavioral or sociological variables.
    Results: During the 12 months preceding the study, 392 accidents occurred, affecting 72.2% of miners. Tools handling represents 51.5%, of the accidents' causes, followed by handling heavy loads (32.9%). Factors such as age, seniority or apprenticeship did not generate significant differences. Contusions were the most common injuries (50.2%), followed by wounds (44.4%). These injuries were located in upper limbs (50.5%) and in lower limbs (29.3%). 80.5% of miners were cared for by their colleagues and 50% of them could not work for more than 3 days. Physical sequelae were reported by 19% of the injured miners.
    Discussion: Many surveys related to accidents in the area of artisanal mining report such high frequency. The unsuitability of tools to jobs to be done is usually raised as one of the major causes of accidents. The lack of differentiation of the tasks carried out in relation to age is another factor explaining the lack of protective effect of seniority as it minimizes the contribution of experience in the worker's safety. The apprenticeship reported is inadequate; it is rather a learning by doing than anything else. That is why it lacks protective effect. Low income combined with precariousness of artisanal mining are likely to explain the low level of work stoppages.
    Conclusion: Tools improvement associated with adequate training seem to be the basis of accident prevention. Availability of suitable medical care should improve artisanal miners' recovery after accidents.
    MeSH term(s) Accidental Falls/statistics & numerical data ; Accidents, Occupational/prevention & control ; Accidents, Occupational/trends ; Adult ; Democratic Republic of the Congo ; Female ; Humans ; Inservice Training ; Lifting/adverse effects ; Male ; Mining/education ; Occupational Health/education ; Occupational Injuries/etiology ; Occupational Injuries/prevention & control ; Risk Factors ; Safety
    Language English
    Publishing date 2013-04
    Publishing country Poland
    Document type Journal Article
    ZDB-ID 1199049-1
    ISSN 1896-494X ; 0867-8383 ; 1232-1087
    ISSN (online) 1896-494X
    ISSN 0867-8383 ; 1232-1087
    DOI 10.2478/s13382-013-0096-0
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Rasch-built Overall Disability Scale for patients with chemotherapy-induced peripheral neuropathy (CIPN-R-ODS).

    Binda, D / Vanhoutte, E K / Cavaletti, G / Cornblath, D R / Postma, T J / Frigeni, B / Alberti, P / Bruna, J / Velasco, R / Argyriou, A A / Kalofonos, H P / Psimaras, D / Ricard, D / Pace, A / Galiè, E / Briani, C / Dalla Torre, C / Lalisang, R I / Boogerd, W /
    Brandsma, D / Koeppen, S / Hense, J / Storey, D / Kerrigan, S / Schenone, A / Fabbri, S / Rossi, E / Valsecchi, M G / Faber, C G / Merkies, I S J / Galimberti, S / Lanzani, F / Mattavelli, L / Piatti, M L / Bidoli, P / Cazzaniga, M / Cortinovis, D / Lucchetta, M / Campagnolo, M / Bakkers, M / Brouwer, B / Grant, R / Reni, L / Piras, B / Pessino, A / Padua, L / Granata, G / Leandri, M / Ghignotti, I / Plasmati, R / Pastorelli, F / Heimans, J J / Eurelings, M / Meijer, R J / Grisold, W / Lindeck Pozza, E / Mazzeo, A / Toscano, A / Russo, M / Tomasello, C / Altavilla, G / Penas Prado, M / Dominguez Gonzalez, C / Dorsey, S G

    European journal of cancer (Oxford, England : 1990)

    2013  Volume 49, Issue 13, Page(s) 2910–2918

    Abstract: ... its validity and reliability properties. A preliminary Rasch-built Overall Disability Scale (pre-R-ODS) comprising 146 items ... validity). External validity was obtained by correlating the CIPN-R-ODS with the National Cancer Institute ... The preliminary R-ODS did not meet Rasch model's expectations. Items displaying misfit statistics, disordered ...

    Abstract Chemotherapy-induced peripheral neuropathy (CIPN) is a common neurological side-effect of cancer treatment and may lead to declines in patients' daily functioning and quality of life. To date, there are no modern clinimetrically well-evaluated outcome measures available to assess disability in CIPN patients. The objective of the study was to develop an interval-weighted scale to capture activity limitations and participation restrictions in CIPN patients using the Rasch methodology and to determine its validity and reliability properties. A preliminary Rasch-built Overall Disability Scale (pre-R-ODS) comprising 146 items was assessed twice (interval: 2-3 weeks; test-retest reliability) in 281 CIPN patients with a stable clinical condition. The obtained data were subjected to Rasch analyses to determine whether model expectations would be met, and if necessarily, adaptations were made to obtain proper model fit (internal validity). External validity was obtained by correlating the CIPN-R-ODS with the National Cancer Institute-Common Toxicity Criteria (NCI-CTC) neuropathy scales and the Pain-Intensity Numeric-Rating-Scale (PI-NRS). The preliminary R-ODS did not meet Rasch model's expectations. Items displaying misfit statistics, disordered thresholds, item bias or local dependency were systematically removed. The final CIPN-R-ODS consisting of 28 items fulfilled all the model's expectations with proper validity and reliability, and was unidimensional. The final CIPN-R-ODS is a Rasch-built disease-specific, interval measure suitable to detect disability in CIPN patients and bypasses the shortcomings of classical test theory ordinal-based measures. Its use is recommended in future clinical trials in CIPN.
    MeSH term(s) Activities of Daily Living ; Adult ; Aged ; Aged, 80 and over ; Antineoplastic Agents/adverse effects ; Chi-Square Distribution ; Consensus ; Disability Evaluation ; Europe ; Female ; Humans ; Male ; Middle Aged ; Pain Measurement ; Peripheral Nervous System Diseases/chemically induced ; Peripheral Nervous System Diseases/diagnosis ; Peripheral Nervous System Diseases/physiopathology ; Peripheral Nervous System Diseases/psychology ; Predictive Value of Tests ; Quality of Life ; Reproducibility of Results ; Severity of Illness Index ; Surveys and Questionnaires
    Chemical Substances Antineoplastic Agents
    Language English
    Publishing date 2013-09
    Publishing country England
    Document type Comparative Study ; Journal Article ; Multicenter Study ; Validation Studies
    ZDB-ID 82061-1
    ISSN 1879-0852 ; 0277-5379 ; 0959-8049 ; 0964-1947
    ISSN (online) 1879-0852
    ISSN 0277-5379 ; 0959-8049 ; 0964-1947
    DOI 10.1016/j.ejca.2013.04.004
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Occupational accidents in artisanal mining in Katanga, D.R.C.

    Myriam Elenge / Alain Leveque / Christophe De Brouwer

    International Journal of Occupational Medicine and Environmental Health, Vol 26, Iss 2, Pp 265-

    2013  Volume 274

    Abstract: Introduction: This study focuses on accidents in artisanal mining, to support policies improving miners' employability. Materials and Methods: Based on a questionnaire administered in November 2009 to a sample of 180 miners from the artisanal mining of ... ...

    Abstract Introduction: This study focuses on accidents in artisanal mining, to support policies improving miners' employability. Materials and Methods: Based on a questionnaire administered in November 2009 to a sample of 180 miners from the artisanal mining of LUPOTO, in the Province of Katanga, we explored significant trends between the accidents and their consequences and behavioral or sociological variables. Results: During the 12 months preceding the study, 392 accidents occurred, affecting 72.2% of miners. Tools handling represents 51.5%, of the accidents' causes, followed by handling heavy loads (32.9%). Factors such as age, seniority or apprenticeship did not generate significant differences. Contusions were the most common injuries (50.2%), followed by wounds (44.4%). These injuries were located in upper limbs (50.5%) and in lower limbs (29.3%). 80.5% of miners were cared for by their colleagues and 50% of them could not work for more than 3 days. Physical sequelae were reported by 19% of the injured miners. Discussion: Many surveys related to accidents in the area of artisanal mining report such high frequency. The unsuitability of tools to jobs to be done is usually raised as one of the major causes of accidents. The lack of differentiation of the tasks carried out in relation to age is another factor explaining the lack of protective effect of seniority as it minimizes the contribution of experience in the worker's safety. The apprenticeship reported is inadequate; it is rather a learning by doing than anything else. That is why it lacks protective effect. Low income combined with precariousness of artisanal mining are likely to explain the low level of work stoppages. Conclusion: Tools improvement associated with adequate training seem to be the basis of accident prevention. Availability of suitable medical care should improve artisanal miners' recovery after accidents.
    Keywords accident ; artisanal mining ; safety ; Katanga ; Medicine ; R
    Subject code 380
    Language English
    Publishing date 2013-04-01T00:00:00Z
    Publisher Nofer Institute of Occupational Medicine
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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