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  1. Article ; Online: Optimal carbon partitioning helps reconcile the apparent divergence between optimal and observed canopy profiles of photosynthetic capacity.

    Buckley, Thomas N

    The New phytologist

    2021  Volume 230, Issue 6, Page(s) 2246–2260

    Abstract: ... in the marginal carbon revenue of N (∂A/∂N) is in fact optimal. The Cowan-Farquhar optimality solution (invariance ... A/∂E) is smaller, in shaded leaves than sunlit leaves, apparently contradicting optimization theory ... The model predicted that photosynthetic capacity per unit irradiance should be larger, and ∂A/∂E smaller ...

    Abstract Photosynthetic capacity per unit irradiance is greater, and the marginal carbon revenue of water (∂A/∂E) is smaller, in shaded leaves than sunlit leaves, apparently contradicting optimization theory. I tested the hypothesis that these patterns arise from optimal carbon partitioning subject to biophysical constraints on leaf water potential. In a whole plant model with two canopy modules, I adjusted carbon partitioning, nitrogen partitioning and leaf water potential to maximize carbon profit or canopy photosynthesis, and recorded how gas exchange parameters compared between shaded and sunlit modules in the optimum. The model predicted that photosynthetic capacity per unit irradiance should be larger, and ∂A/∂E smaller, in shaded modules compared to sunlit modules. This was attributable partly to radiation-driven differences in evaporative demand, and partly to differences in hydraulic conductance arising from the need to balance marginal returns on stem carbon investment between modules. The model verified, however, that invariance in the marginal carbon revenue of N (∂A/∂N) is in fact optimal. The Cowan-Farquhar optimality solution (invariance of ∂A/∂E) does not apply to spatial variation within a canopy. The resulting variation in carbon-water economy explains differences in capacity per unit irradiance, reconciling optimization theory with observations.
    MeSH term(s) Carbon ; Nitrogen ; Photosynthesis ; Plant Leaves ; Water
    Chemical Substances Water (059QF0KO0R) ; Carbon (7440-44-0) ; Nitrogen (N762921K75)
    Language English
    Publishing date 2021-03-08
    Publishing country England
    Document type Journal Article ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 208885-x
    ISSN 1469-8137 ; 0028-646X
    ISSN (online) 1469-8137
    ISSN 0028-646X
    DOI 10.1111/nph.17199
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Correlates of using E-cigarettes with high nicotine concentrations among U.S. adults who exclusively vape E-cigarettes or dual use with cigarettes.

    Dai, Hongying Daisy / Buckley, James / Leventhal, Adam M

    Addictive behaviors

    2024  Volume 153, Page(s) 107986

    Abstract: ... In the study samples (exclusive e-cigarette use [n = 1,755], dual-use [n = 1,200]), higher proportions of exclusive e ... Background: Identifying the correlates of using e-cigarettes with high nicotine concentrations ... in exclusive and dual-using vapers can elucidate which subpopulations might be most impacted by e-cigarette ...

    Abstract Background: Identifying the correlates of using e-cigarettes with high nicotine concentrations in exclusive and dual-using vapers can elucidate which subpopulations might be most impacted by e-cigarette regulatory activities related to nicotine concentration.
    Methods: Data are drawn from Wave 5 (December 2018-November 2019) of the Population Assessment of Tobacco and Health (PATH) study. Self-reported nicotine concentration was grouped as high (5.0 %+), moderate (1.8-4.9 %), low (0.1-1.7 %), 0 %, and "I don't know." Multivariable logistic regressions estimated associations of sociodemographic factors, tobacco use status, and e-cigarette use patterns of high nicotine concentration vs. other nicotine levels, stratified by current exclusive e-cigarette use and dual use of e-cigarettes and cigarettes.
    Results: In the study samples (exclusive e-cigarette use [n = 1,755], dual-use [n = 1,200]), higher proportions of exclusive e-cigarette users reported using high nicotine concentrations than dual users (18.3 % vs. 8.6 %). Among exclusive e-cigarette users, never vs. former smokers and daily (vs. someday) e-cigarette users were more likely to use high vs. low nicotine. In both exclusive and dual users, younger (vs. older) adults were more likely to report using high nicotine concentration e-cigarettes than most other nicotine levels. Current dual users who did vs. did not report using e-cigarettes to quit smoking had higher odds of using high vs. 0 % nicotine concentrations.
    Conclusions: High-nicotine e-cigarette use might be elevated in subpopulations that face greater risks for vaping (e.g., never smokers, young adults) than groups who benefit from the potential harm reduction. Regulatory restrictions on high-nicotine products may selectively affect some subgroups adversely impacted by vaping.
    MeSH term(s) Young Adult ; Humans ; Nicotine ; Vaping/epidemiology ; Electronic Nicotine Delivery Systems ; Tobacco Products ; Smoking/epidemiology
    Chemical Substances Nicotine (6M3C89ZY6R)
    Language English
    Publishing date 2024-02-13
    Publishing country England
    Document type Journal Article
    ZDB-ID 197618-7
    ISSN 1873-6327 ; 0306-4603
    ISSN (online) 1873-6327
    ISSN 0306-4603
    DOI 10.1016/j.addbeh.2024.107986
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Evaluating enteric methane emissions within a herd of genetically divergent grazing dairy cows.

    Lahart, B / Buckley, F / Herron, J / Fitzgerald, R / Fitzpatrick, E / Galvin, N / Shalloo, L

    Journal of dairy science

    2023  Volume 107, Issue 1, Page(s) 383–397

    Abstract: Enteric methane ( ... ...

    Abstract Enteric methane (CH
    MeSH term(s) Female ; Cattle ; Animals ; Milk/metabolism ; Lactation/genetics ; Diet/veterinary ; Methane/metabolism ; Energy Intake
    Chemical Substances Methane (OP0UW79H66)
    Language English
    Publishing date 2023-09-13
    Publishing country United States
    Document type Journal Article
    ZDB-ID 242499-x
    ISSN 1525-3198 ; 0022-0302
    ISSN (online) 1525-3198
    ISSN 0022-0302
    DOI 10.3168/jds.2022-22646
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: When does perceptual organization happen?

    Makin, Alexis D J / Buckley, Ned / Austin, Emma / Bertamini, Marco

    Cortex; a journal devoted to the study of the nervous system and behavior

    2024  Volume 174, Page(s) 70–92

    Abstract: Reflectional (mirror) symmetry is an important visual cue for perceptual organization. The brain processes symmetry rapidly and efficiently. Previous work suggests that symmetry activates the extrastriate cortex and generates an event related potential ( ... ...

    Abstract Reflectional (mirror) symmetry is an important visual cue for perceptual organization. The brain processes symmetry rapidly and efficiently. Previous work suggests that symmetry activates the extrastriate cortex and generates an event related potential (ERP) called the Sustained Posterior Negativity (SPN). It has been claimed that no tasks completely block symmetry processing and abolish the SPN. We tested the limits of this claim with a series of eight new Electroencephalography (EEG) experiments (344 participants in total). All experiments used the same symmetrical or asymmetrical dot patterns. When participants attended to regularity in Experiment 1, there was a substantial SPN (Mean amplitude = -2.423 μV). The SPN was reduced, but not abolished, when participants discriminated dot luminance in Experiments 2 and 3 (-.835 and -1.410 μV) or the aspect ratio of a superimposed cross in Experiments 4 and 5 (-.722 and -.601 μV). The SPN also survived when the background pattern was potentially disruptive to the primary task in Experiment 6 (-1.358 μV) and when participants classified negative superimposed words in Experiment 7 (-.510 μV). Finally, the SPN remained when participants attended to the orientation of a diagonal line in Experiment 8 (-.589 μV). While task manipulations can turn down the extrastriate symmetry activation, they cannot render the system completely unresponsive. Permanent readiness to detect reflectional symmetry at the centre of the visual field could be an evolved adaptation.
    MeSH term(s) Humans ; Pattern Recognition, Visual/physiology ; Evoked Potentials/physiology ; Electroencephalography ; Brain/physiology ; Visual Fields
    Language English
    Publishing date 2024-03-01
    Publishing country Italy
    Document type Journal Article
    ZDB-ID 280622-8
    ISSN 1973-8102 ; 0010-9452
    ISSN (online) 1973-8102
    ISSN 0010-9452
    DOI 10.1016/j.cortex.2024.02.007
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Pityriasis rosea-like rash after messenger RNA COVID-19 vaccination: A case report and review of the literature.

    Buckley, Jordan E / Landis, Laura N / Rapini, Ronald P

    JAAD international

    2022  Volume 7, Page(s) 164–168

    Abstract: A spectrum of cutaneous reactions to SARs-CoV-2 (COVID-19) vaccines have been reported in the literature. We present a case of a pityriasis rosea-like rash occurring after Pfizer COVID-19 vaccination and review cases of pityriasis rosea (PR)/PR-like ... ...

    Abstract A spectrum of cutaneous reactions to SARs-CoV-2 (COVID-19) vaccines have been reported in the literature. We present a case of a pityriasis rosea-like rash occurring after Pfizer COVID-19 vaccination and review cases of pityriasis rosea (PR)/PR-like eruption (PR-LE) after mRNA COVID-19 vaccine published in the medical literature. Of the 30 cases found, none experienced severe adverse effects and the rash resolved in an average of 5.6 weeks. It is important for physicians to be aware of this self-limited reaction so they can reassure and appropriately counsel patients that it is safe to receive subsequent vaccine doses despite the cutaneous eruption. Additionally, differences in incidence of this reaction after Pfizer and Moderna vaccination may suggest a differing host immune response incited by these vaccines which warrants further investigation.
    Language English
    Publishing date 2022-02-09
    Publishing country United States
    Document type Journal Article
    ISSN 2666-3287
    ISSN (online) 2666-3287
    DOI 10.1016/j.jdin.2022.01.009
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: An asymptotic formula for the variance of the number of zeroes of a stationary Gaussian process.

    Assaf, Eran / Buckley, Jeremiah / Feldheim, Naomi

    Probability theory and related fields

    2023  Volume 187, Issue 3-4, Page(s) 999–1036

    Abstract: We study the variance of the number of zeroes of a stationary Gaussian process on a long interval. We give a simple asymptotic description under mild mixing conditions. This allows us to characterise minimal and maximal growth. We show that a small ( ... ...

    Abstract We study the variance of the number of zeroes of a stationary Gaussian process on a long interval. We give a simple asymptotic description under mild mixing conditions. This allows us to characterise minimal and maximal growth. We show that a small (symmetrised) atom in the spectral measure at a special frequency does not affect the asymptotic growth of the variance, while an atom at any other frequency results in maximal growth.
    Language English
    Publishing date 2023-09-23
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 1462994-X
    ISSN 1432-2064 ; 0178-8051
    ISSN (online) 1432-2064
    ISSN 0178-8051
    DOI 10.1007/s00440-023-01218-4
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Spindle Chirp and other Sleep Oscillatory Features in Young Children with Autism.

    Cumming, D / Kozhemiako, N / Thurm, A E / Farmer, C A / Purcell, S W / Buckley, A W

    bioRxiv : the preprint server for biology

    2023  

    Abstract: Objectives: To determine whether spindle chirp and other sleep oscillatory features differ in young children with and without autism.: Methods: Automated processing software was used to re-assess an extant set of polysomnograms representing 121 ... ...

    Abstract Objectives: To determine whether spindle chirp and other sleep oscillatory features differ in young children with and without autism.
    Methods: Automated processing software was used to re-assess an extant set of polysomnograms representing 121 children (91 with autism [ASD], 30 typically-developing [TD]), with an age range of 1.35-8.23 years. Spindle metrics, including chirp, and slow oscillation (SO) characteristics were compared between groups. SO and fast and slow spindle (FS, SS) interactions were also investigated. Secondary analyses were performed assessing behavioural data associations, as well as exploratory cohort comparisons to children with non-autism developmental delay (DD).
    Results: Posterior FS and SS chirp was significantly more negative in ASD than TD. Both groups had comparable intra-spindle frequency range and variance. Frontal and central SO amplitude were decreased in ASD. In contrast to previous manual findings, no differences were detected in other spindle or SO metrics. The ASD group displayed a higher parietal coupling angle. No differences were observed in phase-frequency coupling. The DD group demonstrated lower FS chirp and higher coupling angle than TD. Parietal SS chirp was positively associated with full developmental quotient.
    Conclusions: For the first time spindle chirp was investigated in autism and was found to be significantly more negative than in TD in this large cohort of young children. This finding strengthens previous reports of spindle and SO abnormalities in ASD. Further investigation of spindle chirp in healthy and clinical populations across development will help elucidate the significance of this difference and better understand this novel metric.
    Language English
    Publishing date 2023-10-21
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2023.06.15.545095
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: Radiotherapy-related insufficiency fractures and bone mineral density: what is the connection?

    Chatzimavridou-Grigoriadou, Victoria / Barraclough, Lisa H / Kochhar, Rohit / Buckley, Lucy / Alam, Nooreen / Higham, Claire E

    Endocrine connections

    2023  Volume 12, Issue 7

    Abstract: ... regression analyses.: Results: Additional cancer treatments included chemotherapy (n = 31), surgery (n = 20) and ... brachytherapy (n = 19). Median interval between initiation of radiotherapy and RRIF was 11 (7.5-20.8) and ...

    Abstract Background: Radiotherapy-related insufficiency fractures (RRIFs) represent a common, burdensome consequence of pelvic radiotherapy. Their underlying mechanisms remain unclear, and data on the effect of osteoporosis are contradictory, with limited studies assessing bone mineral density (BMD) by dual-energy x-ray absorptiometry (DXA).
    Methods: BMD by DXA (Hologic) scan and fracture risk following pelvic RRIF were retrospectively assessed in 39 patients (median age 68 years) at a tertiary cancer centre. Patient characteristics and treatment history are presented narratively; correlations were explored using univariate regression analyses.
    Results: Additional cancer treatments included chemotherapy (n = 31), surgery (n = 20) and brachytherapy (n = 19). Median interval between initiation of radiotherapy and RRIF was 11 (7.5-20.8) and that between RRIF and DXA 3 was (1-6) months. Three patients had normal BMD, 16 had osteopenia and 16 osteoporosis, following World Health Organization classification. Four patients were <40 years at the time of DXA (all Z-scores > -2). Median 10-year risk for hip and major osteoporotic fracture was 3.1% (1.5-5.7) and 11.5% (7.1-13.8), respectively. Only 33.3% of patients had high fracture risk (hip fracture >4% and/or major osteoporotic >20%), and 31% fell above the intervention threshold per National Osteoporosis Guidelines Group (NOGG) guidance (2017). Higher BMD was predicted by lower pelvic radiotherapy dose (only in L3 and L4), concomitant chemotherapy and higher body mass index.
    Conclusion: At the time of RRIF, most patients did not have osteoporosis, some had normal BMD and overall had low fracture risk. Whilst low BMD is a probable risk factor, it is unlikely to be the main mechanism underlying RRIFs, and further studies are required to understand the predictive value of BMD.
    Language English
    Publishing date 2023-06-21
    Publishing country England
    Document type Journal Article
    ZDB-ID 2668428-7
    ISSN 2049-3614
    ISSN 2049-3614
    DOI 10.1530/EC-22-0328
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Workforce wellbeing centres and their positive role for wellbeing and presenteeism in healthcare workers during the COVID-19 pandemic: secondary analysis of COVID-Well data.

    Blake, Holly / Mancini, Helen / Coyne, Emma / Cooper, Joanne / Stanulewicz-Buckley, Natalia

    BMC health services research

    2024  Volume 24, Issue 1, Page(s) 302

    Abstract: Background: Supported wellbeing centres established during the COVID-19 pandemic provided high quality rest spaces and access to peer-to-peer psychological first aid for healthcare workers (HCWs). The centres were well accessed and valued by HCWs, but ... ...

    Abstract Background: Supported wellbeing centres established during the COVID-19 pandemic provided high quality rest spaces and access to peer-to-peer psychological first aid for healthcare workers (HCWs). The centres were well accessed and valued by HCWs, but their relationship with wellbeing and job-related factors is not well established. The aim of this study was to explore the relationship between wellbeing centre use, HCWs wellbeing and job-related factors (job stressfulness, job satisfaction, presenteeism, turnover intentions).
    Methods: Secondary analysis of data from 819 HCWs from an acute hospital trust who completed an online survey in April-July 2020, as part of the COVID-Well study. Measures included the Warwick Edinburgh Mental Wellbeing Scale, and four single-item global measures of job stressfulness, job satisfaction, presenteeism and turnover intentions. ANCOVA models and regression analyses were conducted on these data.
    Results: HCWs who had not accessed the wellbeing centres had lower wellbeing (β = 0.12, p < .001), higher job stressfulness (β = - 0.22, p < .001), lower job satisfaction (β = 0.39, p < .001), higher presenteeism (β = - 0.22, p < .001) and were of younger age (β = 0.09, p = .002). Centre use was associated with wellbeing irrespective of job stressfulness. Those reporting presenteeism and who accessed the centre (M = 3.30, SE = 0.04) had higher wellbeing than those who accessed the centre but did not report presenteeism (M = 3.06, SE = 0.04) (F(1, 791) = 18.65, p < .001, η
    Conclusions: Accessing wellbeing centres was associated with higher wellbeing of HCWs, particularly for those reporting presenteeism. Therefore, the centres may have provided greatest respite and restoration for those present at work but not in optimal health. Younger workers were disproportionately affected in terms of wellbeing, and targeted support for this population is needed. Strategies to decrease presenteeism and maximise job satisfaction are urgently required. Healthcare organisations should provide rest spaces and psychological support to HCWs for the long-term, as part of a systems-wide approach to improving workforce health and wellbeing.
    MeSH term(s) Humans ; COVID-19/epidemiology ; Pandemics ; Presenteeism ; Health Facilities ; Health Personnel ; Occupational Stress/epidemiology
    Language English
    Publishing date 2024-03-06
    Publishing country England
    Document type Journal Article
    ZDB-ID 2050434-2
    ISSN 1472-6963 ; 1472-6963
    ISSN (online) 1472-6963
    ISSN 1472-6963
    DOI 10.1186/s12913-024-10730-9
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  10. Article ; Online: Optogenetic Control of Subcellular Protein Location and Signaling in Vertebrate Embryos.

    Buckley, Clare E

    Methods in molecular biology (Clifton, N.J.)

    2019  Volume 1920, Page(s) 143–162

    Abstract: ... proteins encoding the phytochrome heterodimerization system in early zebrafish embryos (Buckley et al., Dev ...

    Abstract This chapter describes the use of optogenetic heterodimerization in single cells within whole-vertebrate embryos. This method allows the use of light to reversibly bind together an "anchor" protein and a "bait" protein. Proteins can therefore be directed to specific subcellular compartments, altering biological processes such as cell polarity and signaling. I detail methods for achieving transient expression of fusion proteins encoding the phytochrome heterodimerization system in early zebrafish embryos (Buckley et al., Dev Cell 36(1):117-126, 2016) and describe the imaging parameters used to achieve subcellular light patterning.
    MeSH term(s) Animals ; Embryonic Development ; Gene Expression ; Microinjections ; Optogenetics/methods ; Plasmids/genetics ; Protein Transport ; RNA, Messenger/administration & dosage ; RNA, Messenger/genetics ; Signal Transduction ; Transgenes ; Vertebrates ; Zebrafish
    Chemical Substances RNA, Messenger
    Language English
    Publishing date 2019-02-08
    Publishing country United States
    Document type Journal Article
    ISSN 1940-6029
    ISSN (online) 1940-6029
    DOI 10.1007/978-1-4939-9009-2_10
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