LIVIVO - The Search Portal for Life Sciences

zur deutschen Oberfläche wechseln
Advanced search

Search results

Result 1 - 10 of total 100

Search options

  1. Article ; Online: Scanning ion-conductance microscopy with a double-barreled nanopipette for topographic imaging of charged chromosomes.

    Iwata, Futoshi / Shirasawa, Tatsuru / Mizutani, Yusuke / Ushiki, Tatsuo

    Microscopy (Oxford, England)

    2021  Volume 70, Issue 5, Page(s) 423–435

    Abstract: Scanning ion conductance microscopy (SICM) is useful for imaging soft and fragile biological samples in liquids because it probes the samples' surface topography by detecting ion currents under non-contact and force-free conditions. SICM acquires the ... ...

    Abstract Scanning ion conductance microscopy (SICM) is useful for imaging soft and fragile biological samples in liquids because it probes the samples' surface topography by detecting ion currents under non-contact and force-free conditions. SICM acquires the surface topographical height by detecting the ion current reduction that occurs when an electrolyte-filled glass nanopipette approaches the sample surface. However, most biological materials have electrically charged surfaces in liquid environments, which sometimes affect the behavior of the ion currents detected by SICM and, especially, make topography measurements difficult. For measuring such charged samples, we propose a novel imaging method that uses a double-barrel nanopipette as an SICM probe. The ion current between the two apertures of the nanopipette desensitizes the surface charge effect on imaging. In this study, metaphase chromosomes of Indian muntjac were imaged by this technique because, owing to their strongly negatively charged surfaces in phosphate-buffered saline, it is difficult to obtain the topography of the chromosomes by the conventional SICM with a single-aperture nanopipette. Using the proposed method with a double-barrel nanopipette, the surfaces of the chromosomes were successfully measured, without any surface charge confounder. Since the detailed imaging of sample topography can be performed in physiological liquid conditions regardless of the sample charge, it is expected to be used for analyzing the high-order structure of chromosomes in relation to their dynamic changes in the cell division.
    MeSH term(s) Chromosomes ; Ions ; Microscopy
    Chemical Substances Ions
    Language English
    Publishing date 2021-02-27
    Publishing country England
    Document type Journal Article
    ZDB-ID 2707496-1
    ISSN 2050-5701 ; 2050-5698
    ISSN (online) 2050-5701
    ISSN 2050-5698
    DOI 10.1093/jmicro/dfab009
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  2. Article ; Online: Dual two-color method: A new concept of ultra-wide temperature range thermography (200-3600 °C) for ITER divertor infrared thermography.

    Ushiki, Tomohiko / Imazawa, Ryota / Murakami, Hidetoshi / Shimizu, Kosuke / Sugie, Tatsuo / Hatae, Takaki

    The Review of scientific instruments

    2022  Volume 93, Issue 8, Page(s) 84905

    Abstract: A new temperature measurement method-the dual two-color method-was developed to accurately measure the temperature over an ultra-wide temperature range (200-3600 °C) for ITER divertor infrared thermography. This novel method introduces a third wavelength ...

    Abstract A new temperature measurement method-the dual two-color method-was developed to accurately measure the temperature over an ultra-wide temperature range (200-3600 °C) for ITER divertor infrared thermography. This novel method introduces a third wavelength filter to the conventional two-color method by replacing the shorter single wavelength bandpass filter with a customized dual-bandpass filter having two transmission bands, without having to add a third infrared camera. The dominant wavelength band of the total radiance through the dual-band filter changes automatically as the temperature increases and, consequently, either the shorter or longer wavelength band of the dual-bandpass filter is used to establish the two-color combination at both low and high temperatures. The dual two-color method increased the acceptable measurement error of the two-color radiance ratio for the temperature measurement requirement of the ITER divertor infrared thermography to 9.45% from that of 4.3% when using the conventional two-color method.
    Language English
    Publishing date 2022-08-17
    Publishing country United States
    Document type Journal Article
    ZDB-ID 209865-9
    ISSN 1089-7623 ; 0034-6748
    ISSN (online) 1089-7623
    ISSN 0034-6748
    DOI 10.1063/5.0089269
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  3. Article ; Online: Scanning ion conductance microscopy of isolated metaphase chromosomes in a liquid environment.

    Ushiki, Tatsuo / Ishizaki, Kimihiro / Mizutani, Yusuke / Nakajima, Masato / Iwata, Futoshi

    Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology

    2021  Volume 29, Issue 1, Page(s) 95–106

    Abstract: Scanning probe microscopy (SPM) uses a probing tip which scans over a sample surface for obtaining information on the sample surface characteristics. Among various types of SPM, atomic force microscopy (AFM) has been widely applied to imaging of ... ...

    Abstract Scanning probe microscopy (SPM) uses a probing tip which scans over a sample surface for obtaining information on the sample surface characteristics. Among various types of SPM, atomic force microscopy (AFM) has been widely applied to imaging of biological samples including chromosomes. Scanning ion conductance microscopy (SICM) has been also introduced for visualizing the surface structure of biological samples because it can obtain "contact-free" topographic images in liquid conditions by detecting ion current flow through a pipette opening. However, we recently noticed that the consistent imaging of chromosomes is difficult by SICM. In this paper, the behaviors of the ion current on the sample surfaces were precisely investigated for obtaining SICM images of isolated muntjac metaphase chromosomes more consistently than at present. The present study revealed that application of positive potential to the pipette electrode was acceptable for obtaining the topographic image of chromosomes, while application of negative potential failed in imaging. The approach curves were then studied for analyzing the relationship between the ion current and the tip sample distance when the pipette is approaching chromosomes. The current-voltage (I-V) curve further provided us the accurate interpretation of the ion current behavior during chromosome imaging. These data were further compared with those for SICM imaging of HeLa cells. Our findings indicated that chromosomes are electrically charged and the net charge is strongly negative in normal Dulbecco's phosphate buffered saline. We finally showed that the ion concentration of the bath electrolyte is important for imaging chromosomes by SICM.
    MeSH term(s) Chromosomes ; HeLa Cells ; Humans ; Metaphase ; Microscopy
    Language English
    Publishing date 2021-03-11
    Publishing country Netherlands
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1161632-5
    ISSN 1573-6849 ; 0967-3849
    ISSN (online) 1573-6849
    ISSN 0967-3849
    DOI 10.1007/s10577-021-09659-0
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  4. Article ; Online: Diet-related changes of basal lamina fenestrations in the villous epithelium of the rat small intestine: Statistical analysis on scanning electron microscopy.

    Sato, Masatoshi / Morita, Keisuke / Azumi, Rie / Mizutani, Yusuke / Hayatsu, Manabu / Ushiki, Tatsuo / Terai, Shuji

    Biomedical research (Tokyo, Japan)

    2022  Volume 43, Issue 1, Page(s) 11–22

    Abstract: The epithelial basal lamina of the small intestine has numerous fenestrations for intraepithelial migration of leukocytes. We have reported dynamic changes of fenestrations in dietary conditions. To investigate this phenomenon, we performed statistical ... ...

    Abstract The epithelial basal lamina of the small intestine has numerous fenestrations for intraepithelial migration of leukocytes. We have reported dynamic changes of fenestrations in dietary conditions. To investigate this phenomenon, we performed statistical analyses using scanning electron microscopy images of the epithelial basal lamina of rat intestinal villi after removal of the villous epithelium by osmium maceration. We examined structural changes in the number and size of fenestrations in the rat jejunum and ileum under fasted and fed states for 24 h. Our findings revealed that, in the jejunum, the number of free cells migrating into the epithelium through fenestrations increased from 2 h after feeding, resulting in an increase in the fenestration size of intestinal villi; the number of free cells then tended to decrease at 6 h after feeding, and the fenestration size also gradually decreased. By contrast, the increase in the fenestration size by feeding was not statistically significant in the ileum. These findings indicate that the number of migrating cells increases in the upper part of the small intestine under dietary conditions, which may influence the absorption efficiency of nutrients including lipids, as well as the induction of nutrient-induced inflammation.
    MeSH term(s) Animals ; Basement Membrane ; Diet ; Epithelium ; Intestinal Mucosa ; Intestine, Small ; Microscopy, Electron, Scanning ; Rats
    Language English
    Publishing date 2022-02-16
    Publishing country Japan
    Document type Journal Article
    ZDB-ID 604561-3
    ISSN 1880-313X ; 0388-6107
    ISSN (online) 1880-313X
    ISSN 0388-6107
    DOI 10.2220/biomedres.43.11
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  5. Article ; Online: Error estimations of the heat flux reconstruction for ITER divertor infrared thermography.

    Ushiki, Tomohiko / Imazawa, Ryota / Hatae, Takaki / Sugie, Tatsuo / Murakami, Hidetoshi

    The Review of scientific instruments

    2020  Volume 91, Issue 6, Page(s) 63508

    Abstract: This study developed a new heat flux reconstruction code based on the dual reciprocity boundary element method for the International Thermonuclear Experimental Reactor (ITER) divertor infrared (IR) thermography system. To use divertor heat flux ... ...

    Abstract This study developed a new heat flux reconstruction code based on the dual reciprocity boundary element method for the International Thermonuclear Experimental Reactor (ITER) divertor infrared (IR) thermography system. To use divertor heat flux reconstruction in ITER, we modeled the boundary condition between the coolant pipe inner wall and the coolant based on the temperature-dependent heat transfer coefficient and also considered the temperature dependence of tungsten thermal properties. Using this reconstruction code, we evaluated the sensitivity of the input data errors, divertor coolant temperature, and surface temperature errors on the accuracy of heat flux reconstruction by using simplified heat flux profiles, which are spatially uniform on the top surface of the monoblocks. This heat flux reconstruction method demonstrated that highly accurate heat flux reconstruction can be achieved for high heat flux cases in ITER; however, further studies are needed for low heat flux reconstruction.
    Language English
    Publishing date 2020-06-17
    Publishing country United States
    Document type Journal Article
    ZDB-ID 209865-9
    ISSN 1089-7623 ; 0034-6748
    ISSN (online) 1089-7623
    ISSN 0034-6748
    DOI 10.1063/1.5143893
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  6. Article ; Online: The morphology, size and density of the touch dome in human hairy skin by scanning electron microscopy.

    Kabata, Yudai / Orime, Mari / Abe, Riichiro / Ushiki, Tatsuo

    Microscopy (Oxford, England)

    2019  Volume 68, Issue 3, Page(s) 207–215

    Abstract: The touch domes of mammalian hairy skin are mechanoreceptors characterized by the accumulation of Merkel cell-neurite complexes at the epidermal base. In this study, we examined the shape, size, and density of the touch dome of human skin of the forearm ... ...

    Abstract The touch domes of mammalian hairy skin are mechanoreceptors characterized by the accumulation of Merkel cell-neurite complexes at the epidermal base. In this study, we examined the shape, size, and density of the touch dome of human skin of the forearm and the abdomen through scanning electron microscopy (SEM). Human skin samples were obtained from donated bodies, as well as a patient who underwent biopsy. Skin pieces were treated with a KOH-collagenase method for the separation of the epidermis from the dermis. The basal surface of the separated epidermis was then observed using SEM. The touch dome was clearly determined as a concave area bordered by a thick epidermal ridge, where neural components accumulated. The touch dome was rather independent from hair follicles, although they were sometimes located beside the touch dome. The average size and density of the touch dome were 0.06 mm2 and 3.82 cm2 in the forearm, and 0.10 mm2 and 1.30 cm2 in the abdomen, respectively. Our results suggested that the regional difference in size and density of the touch dome might be related to the sensation's sensitivity as touch spots in human hairy skin.
    MeSH term(s) Abdomen ; Aged ; Female ; Forearm ; Humans ; Male ; Mechanoreceptors/ultrastructure ; Merkel Cells/ultrastructure ; Microscopy, Electron, Scanning/methods ; Middle Aged ; Skin/anatomy & histology ; Skin/ultrastructure ; Touch/physiology
    Language English
    Publishing date 2019-04-04
    Publishing country England
    Document type Journal Article
    ZDB-ID 2707496-1
    ISSN 2050-5701 ; 2050-5698
    ISSN (online) 2050-5701
    ISSN 2050-5698
    DOI 10.1093/jmicro/dfz001
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  7. Article: Scanning ion conductance microscopy of isolated metaphase chromosomes in a liquid environment

    Ushiki, Tatsuo / Ishizaki, Kimihiro / Mizutani, Yusuke / Nakajima, Masato / Iwata, Futoshi

    Chromosome research. 2021 Mar., v. 29, no. 1

    2021  

    Abstract: Scanning probe microscopy (SPM) uses a probing tip which scans over a sample surface for obtaining information on the sample surface characteristics. Among various types of SPM, atomic force microscopy (AFM) has been widely applied to imaging of ... ...

    Abstract Scanning probe microscopy (SPM) uses a probing tip which scans over a sample surface for obtaining information on the sample surface characteristics. Among various types of SPM, atomic force microscopy (AFM) has been widely applied to imaging of biological samples including chromosomes. Scanning ion conductance microscopy (SICM) has been also introduced for visualizing the surface structure of biological samples because it can obtain “contact-free” topographic images in liquid conditions by detecting ion current flow through a pipette opening. However, we recently noticed that the consistent imaging of chromosomes is difficult by SICM. In this paper, the behaviors of the ion current on the sample surfaces were precisely investigated for obtaining SICM images of isolated muntjac metaphase chromosomes more consistently than at present. The present study revealed that application of positive potential to the pipette electrode was acceptable for obtaining the topographic image of chromosomes, while application of negative potential failed in imaging. The approach curves were then studied for analyzing the relationship between the ion current and the tip sample distance when the pipette is approaching chromosomes. The current-voltage (I-V) curve further provided us the accurate interpretation of the ion current behavior during chromosome imaging. These data were further compared with those for SICM imaging of HeLa cells. Our findings indicated that chromosomes are electrically charged and the net charge is strongly negative in normal Dulbecco’s phosphate buffered saline. We finally showed that the ion concentration of the bath electrolyte is important for imaging chromosomes by SICM.
    Keywords atomic force microscopy ; chromosomes ; electrodes ; electrolytes ; liquids ; metaphase ; phosphates ; research
    Language English
    Dates of publication 2021-03
    Size p. 95-106.
    Publishing place Springer Netherlands
    Document type Article
    Note NAL-AP-2-clean
    ZDB-ID 1161632-5
    ISSN 1573-6849 ; 0967-3849
    ISSN (online) 1573-6849
    ISSN 0967-3849
    DOI 10.1007/s10577-021-09659-0
    Database NAL-Catalogue (AGRICOLA)

    More links

    Kategorien

  8. Article ; Online: EGF Downregulates Presynaptic Maturation and Suppresses Synapse Formation In Vitro and In Vivo.

    Takei, Nobuyuki / Yokomaku, Daisaku / Yamada, Takaho / Nagano, Tadasato / Kakita, Akiyoshi / Namba, Hisaaki / Ushiki, Tatsuo / Takahashi, Hitoshi / Nawa, Hiroyuki

    Neurochemical research

    2022  Volume 47, Issue 9, Page(s) 2632–2644

    Abstract: Neuronal differentiation, maturation, and synapse formation are regulated by various growth factors. Here we show that epidermal growth factor (EGF) negatively regulates presynaptic maturation and synapse formation. In cortical neurons, EGF maintained ... ...

    Abstract Neuronal differentiation, maturation, and synapse formation are regulated by various growth factors. Here we show that epidermal growth factor (EGF) negatively regulates presynaptic maturation and synapse formation. In cortical neurons, EGF maintained axon elongation and reduced the sizes of growth cones in culture. Furthermore, EGF decreased the levels of presynaptic molecules and number of presynaptic puncta, suggesting that EGF inhibits neuronal maturation. The reduction of synaptic sites is confirmed by the decreased frequencies of miniature EPSCs. In vivo analysis revealed that while peripherally administrated EGF decreased the levels of presynaptic molecules and numbers of synaptophysin-positive puncta in the prefrontal cortices of neonatal rats, EGF receptor inhibitors upregulated these indexes, suggesting that endogenous EGF receptor ligands suppress presynaptic maturation. Electron microscopy further revealed that EGF decreased the numbers, but not the sizes, of synaptic structures in vivo. These findings suggest that endogenous EGF and/or other EGF receptor ligands negatively modulates presynaptic maturation and synapse formation.
    MeSH term(s) Animals ; Axons ; Cells, Cultured ; Epidermal Growth Factor/pharmacology ; Neurogenesis/physiology ; Neurons/metabolism ; Rats ; Synapses/metabolism
    Chemical Substances Epidermal Growth Factor (62229-50-9)
    Language English
    Publishing date 2022-01-04
    Publishing country United States
    Document type Journal Article
    ZDB-ID 199335-5
    ISSN 1573-6903 ; 0364-3190
    ISSN (online) 1573-6903
    ISSN 0364-3190
    DOI 10.1007/s11064-021-03524-6
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  9. Article ; Online: Dystonin modifiers of junctional epidermolysis bullosa and models of epidermolysis bullosa simplex without dystonia musculorum

    Thomas J. Sproule / Robert Y. Wilpan / John J. Wilson / Benjamin E. Low / Yudai Kabata / Tatsuo Ushiki / Riichiro Abe / Michael V. Wiles / Derry C. Roopenian / John P. Sundberg

    PLoS ONE, Vol 18, Iss

    2023  Volume 10

    Keywords Medicine ; R ; Science ; Q
    Language English
    Publishing date 2023-01-01T00:00:00Z
    Publisher Public Library of Science (PLoS)
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

  10. Article ; Online: Dystonin modifiers of junctional epidermolysis bullosa and models of epidermolysis bullosa simplex without dystonia musculorum.

    Sproule, Thomas J / Wilpan, Robert Y / Wilson, John J / Low, Benjamin E / Kabata, Yudai / Ushiki, Tatsuo / Abe, Riichiro / Wiles, Michael V / Roopenian, Derry C / Sundberg, John P

    PloS one

    2023  Volume 18, Issue 10, Page(s) e0293218

    Abstract: The Lamc2jeb junctional epidermolysis bullosa (EB) mouse model has been used to demonstrate that significant genetic modification of EB symptoms is possible, identifying as modifiers Col17a1 and six other quantitative trait loci, several with strong ... ...

    Abstract The Lamc2jeb junctional epidermolysis bullosa (EB) mouse model has been used to demonstrate that significant genetic modification of EB symptoms is possible, identifying as modifiers Col17a1 and six other quantitative trait loci, several with strong candidate genes including dystonin (Dst/Bpag1). Here, CRISPR/Cas9 was used to alter exon 23 in mouse skin specific isoform Dst-e (Ensembl GRCm38 transcript name Dst-213, transcript ID ENSMUST00000183302.5, protein size 2639AA) and validate a proposed arginine/glutamine difference at amino acid p1226 in B6 versus 129 mice as a modifier of EB. Frame shift deletions (FSD) in mouse Dst-e exon 23 (Dst-eFSD/FSD) were also identified that cause mice carrying wild-type Lamc2 to develop a phenotype similar to human EB simplex without dystonia musculorum. When combined, Dst-eFSD/FSD modifies Lamc2jeb/jeb (FSD+jeb) induced disease in unexpected ways implicating an altered balance between DST-e (BPAG1e) and a rarely reported rodless DST-eS (BPAG1eS) in epithelium as a possible mechanism. Further, FSD+jeb mice with pinnae removed are found to provide a test bed for studying internal epithelium EB disease and treatment without severe skin disease as a limiting factor while also revealing and accelerating significant nasopharynx symptoms present but not previously noted in Lamc2jeb/jeb mice.
    MeSH term(s) Animals ; Mice ; Dystonia/genetics ; Dystonia/metabolism ; Dystonic Disorders/metabolism ; Dystonin/metabolism ; Epidermolysis Bullosa/genetics ; Epidermolysis Bullosa Simplex/diagnosis ; Epidermolysis Bullosa Simplex/genetics ; Epidermolysis Bullosa Simplex/metabolism ; Epidermolysis Bullosa, Junctional/genetics ; Epidermolysis Bullosa, Junctional/diagnosis ; Epidermolysis Bullosa, Junctional/metabolism ; Skin/metabolism
    Chemical Substances Dystonin ; Dst protein, mouse
    Language English
    Publishing date 2023-10-26
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2267670-3
    ISSN 1932-6203 ; 1932-6203
    ISSN (online) 1932-6203
    ISSN 1932-6203
    DOI 10.1371/journal.pone.0293218
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

To top