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  1. Article ; Online: N

    An, Yanming / Parsons, Lisa M / Jankowska, Ewa / Melnyk, Darya / Joshi, Manju / Cipollo, John F

    Journal of virology

    2019  Volume 93, Issue 2

    Abstract: Prior to each annual flu season, health authorities recommend three or four virus strains for inclusion in the annual influenza vaccine: a type A:H1N1 virus, a type A:H3N2 virus, and one or two type B viruses. Antigenic differences between strains are ... ...

    Abstract Prior to each annual flu season, health authorities recommend three or four virus strains for inclusion in the annual influenza vaccine: a type A:H1N1 virus, a type A:H3N2 virus, and one or two type B viruses. Antigenic differences between strains are found in the glycosylation patterns of the major influenza virus antigen, hemagglutinin (HA). Here we examine the glycosylation patterns of seven reference antigens containing HA used in influenza vaccine potency testing. These reagents are supplied by the Center for Biologics Evaluation and Research (CBER) or the National Institute for Biological Standards and Control (NIBSC) for use in vaccine testing. Those produced in hen egg, Madin-Darby canine kidney (MDCK), and insect (Sf9) expression systems were examined. They are closely related or identical to antigens used in commercial vaccines. The reference antigens studied were used in the 2014-2015 influenza season and included A/California/07/2009 H1N1, A/Texas/50/2012 H3N2, and B/Massachusetts/02/2012. Released glycan and HA-specific glycopeptide glycosylation patterns were examined. We also examined the sensitivity of the single radial immunodiffusion (SRID) potency test to differences in HA antigen glycosylation. Based on deglycosylation studies applied using standard assay procedures, the SRID assay was not sensitive to any HA antigen glycosylation status from any cell system. Mapping of glycosites with their occupying glycan to functional regions, including antigenic sites, lectin interaction regions, and fusion domains, was performed and has implications for immune processing, immune responses, and antigenic shielding. Differences in glycosylation patterns, as dictated by the cell system used for expression, may impact these functions.
    MeSH term(s) Animals ; Chickens ; Dogs ; Glycosylation ; Hemagglutinin Glycoproteins, Influenza Virus/chemistry ; Hemagglutinin Glycoproteins, Influenza Virus/immunology ; Humans ; Immunodiffusion ; Influenza A Virus, H1N1 Subtype/immunology ; Influenza A Virus, H3N2 Subtype/immunology ; Influenza B virus/immunology ; Influenza Vaccines/immunology ; Influenza Vaccines/metabolism ; Madin Darby Canine Kidney Cells ; Sf9 Cells ; Species Specificity
    Chemical Substances Hemagglutinin Glycoproteins, Influenza Virus ; Influenza Vaccines
    Language English
    Publishing date 2019-01-04
    Publishing country United States
    Document type Journal Article
    ZDB-ID 80174-4
    ISSN 1098-5514 ; 0022-538X
    ISSN (online) 1098-5514
    ISSN 0022-538X
    DOI 10.1128/JVI.01693-18
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: RIFM fragrance ingredient safety assessment, N,N-diethyloctamide, CAS registry number 996-97-4.

    Api, A M / Bartlett, A / Belsito, D / Botelho, D / Bruze, M / Bryant-Freidrich, A / Burton, G A / Cancellieri, M A / Chon, H / Dagli, M L / Dekant, W / Deodhar, C / Farrell, K / Fryer, A D / Jones, L / Joshi, K / Lapczynski, A / Lavelle, M / Lee, I /
    Moustakas, H / Muldoon, J / Penning, T M / Ritacco, G / Sadekar, N / Schember, I / Schultz, T W / Siddiqi, F / Sipes, I G / Sullivan, G / Thakkar, Y / Tokura, Y

    Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association

    2024  Volume 189 Suppl 1, Page(s) 114657

    Language English
    Publishing date 2024-04-16
    Publishing country England
    Document type Journal Article
    ZDB-ID 782617-5
    ISSN 1873-6351 ; 0278-6915
    ISSN (online) 1873-6351
    ISSN 0278-6915
    DOI 10.1016/j.fct.2024.114657
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Dysregulated proteome and N-glycoproteome in ALG1-deficient fibroblasts.

    Budhraja, Rohit / Joshi, Neha / Radenkovic, Silvia / Kozicz, Tamas / Morava, Eva / Pandey, Akhilesh

    Proteomics

    2024  , Page(s) e2400012

    Abstract: ... gene, which catalyzes the first step of mannosylation in N-glycosylation. Pathogenic variants in ALG1 ... N-glycoproteomics study in fibroblasts derived from patients with one homozygous and two compound ... and cellular stress. N-glycoproteomics revealed the reduction in high-mannose and complex/hybrid ...

    Abstract Asparagine-linked glycosylation 1 protein is a β-1,4-mannosyltransferase, is encoded by the ALG1 gene, which catalyzes the first step of mannosylation in N-glycosylation. Pathogenic variants in ALG1 cause a rare autosomal recessive disorder termed as ALG1-CDG. We performed a quantitative proteomics and N-glycoproteomics study in fibroblasts derived from patients with one homozygous and two compound heterozygous pathogenic variants in ALG1. Several proteins that exhibited significant upregulation included insulin-like growth factor II and pleckstrin, whereas hyaluronan and proteoglycan link protein 1 was downregulated. These proteins are crucial for cell growth, survival and differentiation. Additionally, we observed a decrease in the expression of mitochondrial proteins and an increase in autophagy-related proteins, suggesting mitochondrial and cellular stress. N-glycoproteomics revealed the reduction in high-mannose and complex/hybrid glycopeptides derived from numerous proteins in patients explaining that defect in ALG1 has broad effects on glycosylation. Further, we detected an increase in several short oligosaccharides, including chitobiose (HexNAc
    Language English
    Publishing date 2024-03-12
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2032093-0
    ISSN 1615-9861 ; 1615-9853
    ISSN (online) 1615-9861
    ISSN 1615-9853
    DOI 10.1002/pmic.202400012
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: The Autoinducer N-Octanoyl-L-Homoserine Lactone (C8-HSL) as a Potential Adjuvant in Vaccine Formulations.

    Shah, Sarthak M / Joshi, Devyani / Chbib, Christiane / Roni, Monzurul A / Uddin, Mohammad N

    Pharmaceuticals (Basel, Switzerland)

    2023  Volume 16, Issue 5

    Abstract: ... of chemical communication between bacteria. The autoinducer N-octanoyl-L-Homoserinehomoserine lactone (C8-HSL ...

    Abstract Autoinducers AI-1 and AI-2 play an important role in bacterial quorum sensing (QS), a form of chemical communication between bacteria. The autoinducer N-octanoyl-L-Homoserinehomoserine lactone (C8-HSL) serves as a major inter- and intraspecies communicator or 'signal', mainly for Gram-negative bacteria. C8-HSL is proposed to have immunogenic properties. The aim of this project is to evaluate C8-HSL as a potential vaccine adjuvant. For this purpose, a microparticulate formulation was developed. The C8-HSL microparticles (MPs) were formulated by a water/oil/water (W/O/W) double-emulsion solvent evaporation method using PLGA (poly (lactic-co-glycolic acid)) polymer. We tested C8-HSL MPs with two spray-dried bovine serum albumin (BSA)-encapsulated bacterial antigens: colonization factor antigen I (CFA/I) from
    Language English
    Publishing date 2023-05-08
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2193542-7
    ISSN 1424-8247
    ISSN 1424-8247
    DOI 10.3390/ph16050713
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: RIFM fragrance ingredient safety assessment, N-p-benzeneacetonitrilementhanecarboxamide, CAS Registry Number 852379-28-3.

    Api, A M / Belsito, D / Botelho, D / Bruze, M / Burton, G A / Cancellieri, M A / Chon, H / Dagli, M L / Dekant, W / Deodhar, C / Fryer, A D / Jones, L / Joshi, K / Kumar, M / Lapczynski, A / Lavelle, M / Lee, I / Liebler, D C / Moustakas, H /
    Muldoon, J / Penning, T M / Ritacco, G / Romine, J / Sadekar, N / Schultz, T W / Selechnik, D / Siddiqi, F / Sipes, I G / Sullivan, G / Thakkar, Y / Tokura, Y

    Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association

    2023  Volume 182 Suppl 1, Page(s) 114203

    Language English
    Publishing date 2023-11-26
    Publishing country England
    Document type Journal Article
    ZDB-ID 782617-5
    ISSN 1873-6351 ; 0278-6915
    ISSN (online) 1873-6351
    ISSN 0278-6915
    DOI 10.1016/j.fct.2023.114203
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: N-Methyl-D-Aspartate (NMDA) Receptor Antagonists and Their Pharmacological Implication: A Medicinal Chemistry-Oriented Perspective Outline.

    Rana, Vikas / Ghosh, Shayantan / Bhatt, Akanksha / Bisht, Damini / Joshi, Gaurav / Purohit, Priyank

    Current medicinal chemistry

    2024  

    Abstract: N-methyl-D-aspartate (NMDA) receptors, i.e., inotropic glutamate receptors, are important ...

    Abstract N-methyl-D-aspartate (NMDA) receptors, i.e., inotropic glutamate receptors, are important in synaptic plasticity, brain growth, memory, and learning. The activation of NMDA is done by neurotransmitter glutamate and co-agonist (glycine or D-serine) binding. However, the over-activation of NMDA elevates the intracellular calcium influx, which causes various neurological diseases and disorders. Therefore, to prevent excitotoxicity and neuronal death, inhibition of NMDA must be done using its antagonist. This review delineates the structure of subunits of NMDA and the conformational changes induced after the binding of agonists (glycine and D-serine) and antagonists (ifenprodil, etc.). Additionally, reported NMDA antagonists from different sources, such as synthetic, semisynthetic, and natural resources, are explained by their mechanism of action and pharmacological role. The comprehensive report also addresses the chemical spacing of NMDA inhibitors and in-vivo and in-vitro models to test NMDA antagonists. Since the Blood-Brain Barrier (BBB) is the primary membrane that prevents the penetration of a wide variety of drug molecules, we also elaborate on the medicinal chemistry approach to improve the effectiveness of their antagonists.
    Language English
    Publishing date 2024-04-17
    Publishing country United Arab Emirates
    Document type Journal Article
    ZDB-ID 1319315-6
    ISSN 1875-533X ; 0929-8673
    ISSN (online) 1875-533X
    ISSN 0929-8673
    DOI 10.2174/0109298673288031240405061759
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Design, characterization and structure-function analysis of novel antimicrobial peptides based on the N-terminal CATH-2 fragment.

    Sharma, Pratibha / Sharma, Sheetal / Joshi, Shubhi / Barman, Panchali / Bhatt, Aashish / Maan, Mayank / Singla, Neha / Rishi, Praveen / Ali, Md Ehesan / Preet, Simran / Saini, Avneet

    Scientific reports

    2022  Volume 12, Issue 1, Page(s) 12058

    Abstract: ... against microbial resistance. In this study, five analogs (DP1-5) of the N-terminal (N-15) fragment ... toxic than the N-terminal CATH-2 peptide. Circular dichroism spectroscopy and ...

    Abstract The emergence of multidrug resistance coupled with shrinking antibiotic pipelines has increased the demand of antimicrobials with novel mechanisms of action. Therefore, researchers across the globe are striving to develop new antimicrobial substances to alleviate the pressure on conventional antibiotic therapies. Host-Defence Peptides (HDPs) and their derivatives are emerging as effective therapeutic agents against microbial resistance. In this study, five analogs (DP1-5) of the N-terminal (N-15) fragment of CATH-2 were designed based on the delicate balance between various physicochemical properties such as charge, aliphatic character, amphipathicity and hydrophobicity. By means of in-silico and in-vitro studies a novel peptide (DP1) with the sequence "RFGRFLRKILRFLKK" was found to be more effective and less toxic than the N-terminal CATH-2 peptide. Circular dichroism spectroscopy and differential scanning calorimetry were applied for structural insights. Antimicrobial, haemolytic, and cytotoxic activities were also assessed. The resulting peptide was characterized by low cytotoxicity, low haemolytic activity, and efficient anti-microbial activity. Structurally, it displayed strong helical properties irrespective of the solvent environment and was stable in membrane-mimicking environments. Taken together, the data suggests that DP1 can be explored as a promising therapeutic agent with possible clinical applications.
    MeSH term(s) Anti-Bacterial Agents/chemistry ; Anti-Infective Agents/chemistry ; Anti-Infective Agents/pharmacology ; Antimicrobial Cationic Peptides/chemistry ; Antimicrobial Cationic Peptides/pharmacology ; Antimicrobial Peptides ; Circular Dichroism ; Hemolysis ; Humans ; Microbial Sensitivity Tests
    Chemical Substances Anti-Bacterial Agents ; Anti-Infective Agents ; Antimicrobial Cationic Peptides ; Antimicrobial Peptides
    Language English
    Publishing date 2022-07-14
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2615211-3
    ISSN 2045-2322 ; 2045-2322
    ISSN (online) 2045-2322
    ISSN 2045-2322
    DOI 10.1038/s41598-022-16303-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: RIFM fragrance ingredient safety assessment, n-hexane, CAS Registry Number 110-54-3.

    Api, A M / Belsito, D / Botelho, D / Bruze, M / Burton, G A / Buschmann, J / Cancellieri, M A / Dagli, M L / Date, M / Dekant, W / Deodhar, C / Fryer, A D / Jones, L / Joshi, K / Kumar, M / Lapczynski, A / Lavelle, M / Lee, I / Liebler, D C /
    Moustakas, H / Na, M / Penning, T M / Ritacco, G / Romine, J / Sadekar, N / Schultz, T W / Selechnik, D / Siddiqi, F / Sipes, I G / Sullivan, G / Thakkar, Y / Tokura, Y

    Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association

    2022  Volume 163 Suppl 1, Page(s) 112973

    MeSH term(s) Hexanes ; Odorants ; Perfume/toxicity ; Registries
    Chemical Substances Hexanes ; Perfume ; n-hexane (2DDG612ED8)
    Language English
    Publishing date 2022-03-30
    Publishing country England
    Document type Journal Article
    ZDB-ID 782617-5
    ISSN 1873-6351 ; 0278-6915
    ISSN (online) 1873-6351
    ISSN 0278-6915
    DOI 10.1016/j.fct.2022.112973
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: RIFM fragrance ingredient safety assessment, n-butyl 2-methylbutyrate, CAS Registry Number 15706-73-7.

    Api, A M / Belsito, D / Botelho, D / Bruze, M / Burton, G A / Cancellieri, M A / Chon, H / Dagli, M L / Date, M / Dekant, W / Deodhar, C / Fryer, A D / Jones, L / Joshi, K / Kumar, M / Lapczynski, A / Lavelle, M / Lee, I / Liebler, D C /
    Moustakas, H / Na, M / Penning, T M / Ritacco, G / Romine, J / Sadekar, N / Schultz, T W / Selechnik, D / Siddiqi, F / Sipes, I G / Sullivan, G / Thakkar, Y / Tokura, Y

    Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association

    2022  Volume 163 Suppl 1, Page(s) 112906

    MeSH term(s) Butyrates ; Odorants ; Perfume/toxicity ; Registries
    Chemical Substances Butyrates ; Perfume ; 2-methylbutanoic acid (PX7ZNN5GXK)
    Language English
    Publishing date 2022-03-05
    Publishing country England
    Document type Journal Article
    ZDB-ID 782617-5
    ISSN 1873-6351 ; 0278-6915
    ISSN (online) 1873-6351
    ISSN 0278-6915
    DOI 10.1016/j.fct.2022.112906
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article: Effects of sewage sludge hydrochar on emissions of the climate-relevant trace gases N

    Joshi, Arpan / Breulmann, Marc / Schulz, Elke / Ruser, Reiner

    Heliyon

    2022  Volume 8, Issue 10, Page(s) e10855

    Abstract: ... nitrous oxide (N ...

    Abstract This work explores the effects of amending a loamy sand soil with hydrochars having different physicochemcial characteristics. The effects of different hydrochars on emissions of the greenhouse gases nitrous oxide (N
    Language English
    Publishing date 2022-10-08
    Publishing country England
    Document type Journal Article
    ZDB-ID 2835763-2
    ISSN 2405-8440
    ISSN 2405-8440
    DOI 10.1016/j.heliyon.2022.e10855
    Database MEDical Literature Analysis and Retrieval System OnLINE

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