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  1. Article: Thematic review series: lipid posttranslational modifications. CAAX modification and membrane targeting of Ras.

    Wright, Latasha P / Philips, Mark R

    Journal of lipid research

    2006  Volume 47, Issue 5, Page(s) 883–891

    Abstract: Proteins that terminate with a consensus sequence known as CAAX undergo a series of posttranslational modifications that include polyisoprenylation, endoproteolysis, and carboxyl methylation. These modifications render otherwise hydrophilic proteins ... ...

    Abstract Proteins that terminate with a consensus sequence known as CAAX undergo a series of posttranslational modifications that include polyisoprenylation, endoproteolysis, and carboxyl methylation. These modifications render otherwise hydrophilic proteins hydrophobic at their C termini such that they associate with membranes. Whereas prenylation occurs in the cytosol, postprenylation processing is accomplished on the cytoplasmic surface of the endoplasmic reticulum and Golgi apparatus. Among the numerous CAAX proteins encoded in mammalian genomes are many signaling molecules such as monomeric GTPases, including the Ras proteins that play an important role in cancer. In the course of their processing, nascent Ras proteins traffic from their site of synthesis in the cytosol to the endomembrane and then out to the plasma membrane (PM) by at least two pathways. Recently, retrograde pathways have been discovered that deliver mature Ras from the PM back to the Golgi. The Golgi has been identified as a platform upon which Ras can signal. Thus, the subcellular trafficking of Ras proteins has the potential to increase the complexity of Ras signaling by adding a spatial dimension. The complexity of Ras trafficking also affords a wider array of potential targets for the discovery of drugs that might inhibit tumors by interfering with Ras trafficking.
    MeSH term(s) Alkyl and Aryl Transferases/metabolism ; Animals ; Guanine Nucleotide Dissociation Inhibitors/metabolism ; Humans ; Protein Processing, Post-Translational/physiology ; Protein Transport/drug effects ; Signal Transduction ; ras Proteins/antagonists & inhibitors ; ras Proteins/metabolism ; rho-Specific Guanine Nucleotide Dissociation Inhibitors
    Chemical Substances Guanine Nucleotide Dissociation Inhibitors ; rho-Specific Guanine Nucleotide Dissociation Inhibitors ; Alkyl and Aryl Transferases (EC 2.5.-) ; geranylgeranyltransferase type-I (EC 2.5.1.-) ; p21(ras) farnesyl-protein transferase (EC 2.5.1.-) ; ras Proteins (EC 3.6.5.2)
    Language English
    Publishing date 2006-03-16
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S. ; Review
    ZDB-ID 80154-9
    ISSN 1539-7262 ; 0022-2275
    ISSN (online) 1539-7262
    ISSN 0022-2275
    DOI 10.1194/jlr.R600004-JLR200
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Cross-species oncogenomics offers insight into human muscle-invasive bladder cancer.

    Wong, Kim / Abascal, Federico / Ludwig, Latasha / Aupperle-Lellbach, Heike / Grassinger, Julia / Wright, Colin W / Allison, Simon J / Pinder, Emma / Phillips, Roger M / Romero, Laura P / Gal, Arnon / Roady, Patrick J / Pires, Isabel / Guscetti, Franco / Munday, John S / Peleteiro, Maria C / Pinto, Carlos A / Carvalho, Tânia / Cota, João /
    Du Plessis, Elizabeth C / Constantino-Casas, Fernando / Plog, Stephanie / Moe, Lars / de Brot, Simone / Bemelmans, Ingrid / Amorim, Renée Laufer / Georgy, Smitha R / Prada, Justina / Del Pozo, Jorge / Heimann, Marianne / de Carvalho Nunes, Louisiane / Simola, Outi / Pazzi, Paolo / Steyl, Johan / Ubukata, Rodrigo / Vajdovich, Peter / Priestnall, Simon L / Suárez-Bonnet, Alejandro / Roperto, Franco / Millanta, Francesca / Palmieri, Chiara / Ortiz, Ana L / Barros, Claudio S L / Gava, Aldo / Söderström, Minna E / O'Donnell, Marie / Klopfleisch, Robert / Manrique-Rincón, Andrea / Martincorena, Inigo / Ferreira, Ingrid / Arends, Mark J / Wood, Geoffrey A / Adams, David J / van der Weyden, Louise

    Genome biology

    2023  Volume 24, Issue 1, Page(s) 191

    Abstract: Background: In humans, muscle-invasive bladder cancer (MIBC) is highly aggressive and associated with a poor prognosis. With a high mutation load and large number of altered genes, strategies to delineate key driver events are necessary. Dogs and cats ... ...

    Abstract Background: In humans, muscle-invasive bladder cancer (MIBC) is highly aggressive and associated with a poor prognosis. With a high mutation load and large number of altered genes, strategies to delineate key driver events are necessary. Dogs and cats develop urothelial carcinoma (UC) with histological and clinical similarities to human MIBC. Cattle that graze on bracken fern also develop UC, associated with exposure to the carcinogen ptaquiloside. These species may represent relevant animal models of spontaneous and carcinogen-induced UC that can provide insight into human MIBC.
    Results: Whole-exome sequencing of domestic canine (n = 87) and feline (n = 23) UC, and comparative analysis with human MIBC reveals a lower mutation rate in animal cases and the absence of APOBEC mutational signatures. A convergence of driver genes (ARID1A, KDM6A, TP53, FAT1, and NRAS) is discovered, along with common focally amplified and deleted genes involved in regulation of the cell cycle and chromatin remodelling. We identify mismatch repair deficiency in a subset of canine and feline UCs with biallelic inactivation of MSH2. Bovine UC (n = 8) is distinctly different; we identify novel mutational signatures which are recapitulated in vitro in human urinary bladder UC cells treated with bracken fern extracts or purified ptaquiloside.
    Conclusion: Canine and feline urinary bladder UC represent relevant models of MIBC in humans, and cross-species analysis can identify evolutionarily conserved driver genes. We characterize mutational signatures in bovine UC associated with bracken fern and ptaquiloside exposure, a human-linked cancer exposure. Our work demonstrates the relevance of cross-species comparative analysis in understanding both human and animal UC.
    MeSH term(s) Humans ; Animals ; Cats ; Cattle ; Dogs ; Urinary Bladder Neoplasms/genetics ; Carcinoma, Transitional Cell ; Cat Diseases ; Dog Diseases ; Carcinogens ; Muscles
    Chemical Substances ptaquiloside (F0MN9S5699) ; Carcinogens
    Language English
    Publishing date 2023-08-28
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2040529-7
    ISSN 1474-760X ; 1474-760X
    ISSN (online) 1474-760X
    ISSN 1474-760X
    DOI 10.1186/s13059-023-03026-4
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article: Thematic review series: Lipid Posttranslational Modifications. CAAX modification and membrane targeting of Ras

    Wright, Latasha P / Philips, Mark R

    Journal of lipid research. 2006 May, v. 47, no. 5

    2006  

    Abstract: Proteins that terminate with a consensus sequence known as CAAX undergo a series of posttranslational modifications that include polyisoprenylation, endoproteolysis, and carboxyl methylation. These modifications render otherwise hydrophilic proteins ... ...

    Abstract Proteins that terminate with a consensus sequence known as CAAX undergo a series of posttranslational modifications that include polyisoprenylation, endoproteolysis, and carboxyl methylation. These modifications render otherwise hydrophilic proteins hydrophobic at their C termini such that they associate with membranes. Whereas prenylation occurs in the cytosol, postprenylation processing is accomplished on the cytoplasmic surface of the endoplasmic reticulum and Golgi apparatus. Among the numerous CAAX proteins encoded in mammalian genomes are many signaling molecules such as monomeric GTPases, including the Ras proteins that play an important role in cancer. In the course of their processing, nascent Ras proteins traffic from their site of synthesis in the cytosol to the endomembrane and then out to the plasma membrane (PM) by at least two pathways. Recently, retrograde pathways have been discovered that deliver mature Ras from the PM back to the Golgi. The Golgi has been identified as a platform upon which Ras can signal. Thus, the subcellular trafficking of Ras proteins has the potential to increase the complexity of Ras signaling by adding a spatial dimension. The complexity of Ras trafficking also affords a wider array of potential targets for the discovery of drugs that might inhibit tumors by interfering with Ras trafficking.
    Language English
    Dates of publication 2006-05
    Size p. 883-891.
    Publishing place American Society for Biochemistry and Molecular Biology
    Document type Article
    ZDB-ID 80154-9
    ISSN 1539-7262 ; 0022-2275
    ISSN (online) 1539-7262
    ISSN 0022-2275
    Database NAL-Catalogue (AGRICOLA)

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  4. Article ; Online: Topology of mammalian isoprenylcysteine carboxyl methyltransferase determined in live cells with a fluorescent probe.

    Wright, Latasha P / Court, Helen / Mor, Adam / Ahearn, Ian M / Casey, Patrick J / Philips, Mark R

    Molecular and cellular biology

    2009  Volume 29, Issue 7, Page(s) 1826–1833

    Abstract: Isoprenylcysteine carboxyl methyltransferase (Icmt) is a highly conserved enzyme that methyl esterifies the alpha carboxyl group of prenylated proteins including Ras and related GTPases. Methyl esterification neutralizes the negative charge of the ... ...

    Abstract Isoprenylcysteine carboxyl methyltransferase (Icmt) is a highly conserved enzyme that methyl esterifies the alpha carboxyl group of prenylated proteins including Ras and related GTPases. Methyl esterification neutralizes the negative charge of the prenylcysteine and thereby increases membrane affinity. Icmt is an integral membrane protein restricted to the endoplasmic reticulum (ER). The Saccharomyces cerevisiae ortholog, Ste14p, traverses the ER membrane six times. We used a novel fluorescent reporter to map the topology of human Icmt in living cells. Our results indicate that Icmt traverses the ER membrane eight times, with both N and C termini disposed toward the cytosol and with a helix-turn-helix structure comprising transmembrane (TM) segments 7 and 8. Several conserved amino acids that map to cytoplasmic portions of the enzyme are critical for full enzymatic activity. Mammalian Icmt has an N-terminal extension consisting of two TM segments not found in Ste14p and therefore likely to be regulatory. Icmt is a target for anticancer drug discovery, and these data may facilitate efforts to develop small-molecule inhibitors.
    MeSH term(s) Amino Acid Substitution ; Animals ; Asparagine/metabolism ; COS Cells ; Cell Survival ; Chlorocebus aethiops ; Conserved Sequence ; Cytosol/enzymology ; Endoplasmic Reticulum/enzymology ; Fluorescent Dyes/metabolism ; Glycosylation ; Humans ; Kinetics ; Mutant Proteins/chemistry ; Mutant Proteins/metabolism ; Proline/metabolism ; Protein Methyltransferases/chemistry ; Protein Methyltransferases/metabolism ; Protein Structure, Secondary ; Protein Structure, Tertiary
    Chemical Substances Fluorescent Dyes ; Mutant Proteins ; Asparagine (7006-34-0) ; Proline (9DLQ4CIU6V) ; Protein Methyltransferases (EC 2.1.1.-) ; protein-S-isoprenylcysteine O-methyltransferase (EC 2.1.1.100)
    Language English
    Publishing date 2009-01-21
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 779397-2
    ISSN 1098-5549 ; 0270-7306
    ISSN (online) 1098-5549
    ISSN 0270-7306
    DOI 10.1128/MCB.01719-08
    Database MEDical Literature Analysis and Retrieval System OnLINE

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