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  1. Article ; Online: Comparative structure activity and target exploration of 1,2-diphenylethynes in Haemonchus contortus and Caenorhabditis elegans.

    Shanley, Harrison T / Taki, Aya C / Nguyen, Nghi / Wang, Tao / Byrne, Joseph J / Ang, Ching-Seng / Leeming, Michael G / Williamson, Nicholas / Chang, Bill C H / Jabbar, Abdul / Sleebs, Brad E / Gasser, Robin B

    International journal for parasitology. Drugs and drug resistance

    2024  Volume 25, Page(s) 100534

    Abstract: Infections and diseases caused by parasitic nematodes have a major adverse impact on the health and productivity of animals and humans worldwide. The control of these parasites often relies heavily on the treatment with commercially available chemical ... ...

    Abstract Infections and diseases caused by parasitic nematodes have a major adverse impact on the health and productivity of animals and humans worldwide. The control of these parasites often relies heavily on the treatment with commercially available chemical compounds (anthelmintics). However, the excessive or uncontrolled use of these compounds in livestock animals has led to major challenges linked to drug resistance in nematodes. Therefore, there is a need to develop new anthelmintics with novel mechanism(s) of action. Recently, we identified a small molecule, designated UMW-9729, with nematocidal activity against the free-living model organism Caenorhabditis elegans. Here, we evaluated UMW-9729's potential as an anthelmintic in a structure-activity relationship (SAR) study in C. elegans and the highly pathogenic, blood-feeding Haemonchus contortus (barber's pole worm), and explored the compound-target relationship using thermal proteome profiling (TPP). First, we synthesised and tested 25 analogues of UMW-9729 for their nematocidal activity in both H. contortus (larvae and adults) and C. elegans (young adults), establishing a preliminary nematocidal pharmacophore for both species. We identified several compounds with marked activity against either H. contortus or C. elegans which had greater efficacy than UMW-9729, and found a significant divergence in compound bioactivity between these two nematode species. We also identified a UMW-9729 analogue, designated 25, that moderately inhibited the motility of adult female H. contortus in vitro. Subsequently, we inferred three H. contortus proteins (HCON_00134350, HCON_00021470 and HCON_00099760) and five C. elegans proteins (F30A10.9, F15B9.8, B0361.6, DNC-4 and UNC-11) that interacted directly with UMW-9729; however, no conserved protein target was shared between the two nematode species. Future work aims to extend the SAR investigation in these and other parasitic nematode species, and validate individual proteins identified here as possible targets of UMW-9729. Overall, the present study evaluates this anthelmintic candidate and highlights some challenges associated with early anthelmintic investigation.
    Language English
    Publishing date 2024-03-19
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 2751132-7
    ISSN 2211-3207 ; 2211-3207
    ISSN (online) 2211-3207
    ISSN 2211-3207
    DOI 10.1016/j.ijpddr.2024.100534
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: A self-amplifying RNA vaccine provides protection in a murine model of bubonic plague.

    Shattock, Robin John / Andrianaivoarimanana, Voahangy / McKay, Paul F / Randriantseheno, Lovasoa Nomena / Murugaiah, Valarmathy / Samnuan, K / Rogers, Paul / Tregoning, John S / Rajerison, Minoarisoa / Moore, Kristoffer M / Laws, Thomas Robert / Williamson, E Diane

    Frontiers in microbiology

    2023  Volume 14, Page(s) 1247041

    Abstract: Mice were immunized with a combination of self-amplifying (sa) RNA constructs for the F1 and V antigens ... ...

    Abstract Mice were immunized with a combination of self-amplifying (sa) RNA constructs for the F1 and V antigens of
    Language English
    Publishing date 2023-11-02
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2587354-4
    ISSN 1664-302X
    ISSN 1664-302X
    DOI 10.3389/fmicb.2023.1247041
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: The Proteome and Lipidome of Extracellular Vesicles from

    Wang, Tao / Koukoulis, Tiana F / Vella, Laura J / Su, Huaqi / Purnianto, Adityas / Nie, Shuai / Ang, Ching-Seng / Ma, Guangxu / Korhonen, Pasi K / Taki, Aya C / Williamson, Nicholas A / Reid, Gavin E / Gasser, Robin B

    International journal of molecular sciences

    2023  Volume 24, Issue 13

    Abstract: Many parasitic worms have a major adverse impact on human and animal populations worldwide due to the chronicity of their infections. There is a growing body of evidence indicating that extracellular vesicles (EVs) are intimately involved in modulating ( ... ...

    Abstract Many parasitic worms have a major adverse impact on human and animal populations worldwide due to the chronicity of their infections. There is a growing body of evidence indicating that extracellular vesicles (EVs) are intimately involved in modulating (suppressing) inflammatory/immune host responses and parasitism. As one of the most pathogenic nematodes of livestock animals,
    MeSH term(s) Animals ; Humans ; Haemonchus/chemistry ; Haemonchus/metabolism ; Parasites ; Proteome/metabolism ; Lipidomics ; Extracellular Vesicles ; Lipids
    Chemical Substances Proteome ; Lipids
    Language English
    Publishing date 2023-06-30
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms241310955
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  4. Article ; Online: Lipid composition and abundance in the reproductive and alimentary tracts of female Haemonchus contortus.

    Wang, Tao / Ma, Guangxu / Nie, Shuai / Williamson, Nicholas A / Reid, Gavin E / Gasser, Robin B

    Parasites & vectors

    2020  Volume 13, Issue 1, Page(s) 338

    Abstract: ... Glycerolipids (i.e. triradylglycerols) and glycerophospholipids (i.e. glycerophosphocholines) were the most ... as an energy source (i.e. triradylglycerol) or are involved in phospholipid biosynthesis (i.e. incorporated ... fatty acids) and host-parasite interactions (i.e. phospholipids and lysophospholipids).: Conclusions ...

    Abstract Background: Lipids play essential structural and functional roles in the biology of animals. Studying the composition and abundance of lipids in parasites should assist in gaining a better understanding of their molecular biology, biochemistry and host-parasite interactions.
    Methods: Here, we used a combination of high-performance liquid chromatography and mass spectrometric analyses, combined with bioinformatics, to explore the lipid composition and abundance in the reproductive (Rt) and alimentary (At) tracts of Haemonchus contortus.
    Results: We identified and quantified 320 unique lipid species representing four categories: glycerolipids, glycerophospholipids, sphingolipids and steroid lipids. Glycerolipids (i.e. triradylglycerols) and glycerophospholipids (i.e. glycerophosphocholines) were the most commonly and abundant lipid classes identified and were significantly enriched in Rt and At, respectively. We propose that select parasite-derived lipids in Rt and At of adult female H. contortus are required as an energy source (i.e. triradylglycerol) or are involved in phospholipid biosynthesis (i.e. incorporated fatty acids) and host-parasite interactions (i.e. phospholipids and lysophospholipids).
    Conclusions: This work provides a first foundation to explore lipids at the organ-specific and tissue-specific levels in nematodes, and to start to unravel aspects of lipid transport, synthesis and metabolism, with a perspective on discovering new intervention targets.
    MeSH term(s) Animals ; Chromatography, Liquid/methods ; Digestive System/metabolism ; Female ; Genitalia/metabolism ; Haemonchiasis/parasitology ; Haemonchus/metabolism ; Host-Parasite Interactions ; Life Cycle Stages/physiology ; Lipid Metabolism ; Lipids/analysis ; Lipids/chemistry ; Male ; Mass Spectrometry/methods ; Nematoda ; Sex Factors
    Chemical Substances Lipids
    Language English
    Publishing date 2020-07-06
    Publishing country England
    Document type Journal Article
    ZDB-ID 2409480-8
    ISSN 1756-3305 ; 1756-3305
    ISSN (online) 1756-3305
    ISSN 1756-3305
    DOI 10.1186/s13071-020-04208-w
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Structure-activity relationship and target investigation of 2-aryl quinolines with nematocidal activity.

    Shanley, Harrison T / Taki, Aya C / Nguyen, Nghi / Wang, Tao / Byrne, Joseph J / Ang, Ching-Seng / Leeming, Michael G / Nie, Shuai / Williamson, Nicholas / Zheng, Yuanting / Young, Neil D / Korhonen, Pasi K / Hofmann, Andreas / Chang, Bill C H / Wells, Tim N C / Häberli, Cécile / Keiser, Jennifer / Jabbar, Abdul / Sleebs, Brad E /
    Gasser, Robin B

    International journal for parasitology. Drugs and drug resistance

    2024  Volume 24, Page(s) 100522

    Abstract: Within the context of our anthelmintic discovery program, we recently identified and evaluated a quinoline derivative, called ABX464 or obefazimod, as a nematocidal candidate; synthesised a series of analogues which were assessed for activity against the ...

    Abstract Within the context of our anthelmintic discovery program, we recently identified and evaluated a quinoline derivative, called ABX464 or obefazimod, as a nematocidal candidate; synthesised a series of analogues which were assessed for activity against the free-living nematode Caenorhabditis elegans; and predicted compound-target relationships by thermal proteome profiling (TPP) and in silico docking. Here, we logically extended this work and critically evaluated the anthelmintic activity of ABX464 analogues on Haemonchus contortus (barber's pole worm) - a highly pathogenic nematode of ruminant livestock. First, we tested a series of 44 analogues on H. contortus (larvae and adults) to investigate the nematocidal pharmacophore of ABX464, and identified one compound with greater potency than the parent compound and showed moderate activity against a select number of other parasitic nematodes (including Ancylostoma, Heligmosomoides and Strongyloides species). Using TPP and in silico modelling studies, we predicted protein HCON_00074590 (a predicted aldo-keto reductase) as a target candidate for ABX464 in H. contortus. Future work aims to optimise this compound as a nematocidal candidate and investigate its pharmacokinetic properties. Overall, this study presents a first step toward the development of a new nematocide.
    MeSH term(s) Animals ; Antinematodal Agents/pharmacology ; Nematoda ; Anthelmintics/pharmacology ; Haemonchus ; Structure-Activity Relationship ; Caenorhabditis elegans ; Quinolines/pharmacology
    Chemical Substances Antinematodal Agents ; Anthelmintics ; Quinolines
    Language English
    Publishing date 2024-01-23
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 2751132-7
    ISSN 2211-3207 ; 2211-3207
    ISSN (online) 2211-3207
    ISSN 2211-3207
    DOI 10.1016/j.ijpddr.2024.100522
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Functional neuronal circuits promote disease progression in cancer.

    Restaino, Anthony C / Walz, Austin / Vermeer, Samuel J / Barr, Jeffrey / Kovács, Attila / Fettig, Robin R / Vermeer, Daniel W / Reavis, Hunter / Williamson, Caitlin S / Lucido, Christopher T / Eichwald, Tuany / Omran, Dalia K / Jung, Euihye / Schwartz, Lauren E / Bell, Maria / Muirhead, DesiRae M / Hooper, Jody E / Spanos, William C / Drapkin, Ronny /
    Talbot, Sebastien / Vermeer, Paola D

    Science advances

    2023  Volume 9, Issue 19, Page(s) eade4443

    Abstract: The molecular and functional contributions of intratumoral nerves to disease remain largely unknown. We localized synaptic markers within tumors suggesting that these nerves form functional connections. Consistent with this, electrophysiological analysis ...

    Abstract The molecular and functional contributions of intratumoral nerves to disease remain largely unknown. We localized synaptic markers within tumors suggesting that these nerves form functional connections. Consistent with this, electrophysiological analysis shows that malignancies harbor significantly higher electrical activity than benign disease or normal tissues. We also demonstrate pharmacologic silencing of tumoral electrical activity. Tumors implanted in transgenic animals lacking nociceptor neurons show reduced electrical activity. These data suggest that intratumoral nerves remain functional at the tumor bed. Immunohistochemical staining demonstrates the presence of the neuropeptide, Substance P (SP), within the tumor space. We show that tumor cells express the SP receptor, NK1R, and that ligand/receptor engagement promotes cellular proliferation and migration. Our findings identify a mechanism whereby intratumoral nerves promote cancer progression.
    MeSH term(s) Animals ; Mice ; Disease Models, Animal ; Humans ; Breast Neoplasms/epidemiology ; Breast Neoplasms/metabolism ; Breast Neoplasms/pathology ; Substance P/metabolism ; Cell Line, Tumor ; Squamous Cell Carcinoma of Head and Neck/metabolism ; Squamous Cell Carcinoma of Head and Neck/pathology ; Squamous Cell Carcinoma of Head and Neck/virology ; Ovarian Neoplasms/epidemiology ; Ovarian Neoplasms/metabolism ; Ovarian Neoplasms/secondary ; Neurons/pathology ; Mice, Inbred C57BL ; Specific Pathogen-Free Organisms ; Ovary/innervation ; Human Papillomavirus Viruses ; Survival Analysis
    Chemical Substances Substance P (33507-63-0)
    Language English
    Publishing date 2023-05-10
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2810933-8
    ISSN 2375-2548 ; 2375-2548
    ISSN (online) 2375-2548
    ISSN 2375-2548
    DOI 10.1126/sciadv.ade4443
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  7. Article ; Online: Structure activity relationship and target prediction for ABX464 analogues in Caenorhabditis elegans.

    Shanley, Harrison T / Taki, Aya C / Nguyen, Nghi / Wang, Tao / Byrne, Joseph J / Ang, Ching-Seng / Leeming, Michael G / Nie, Shuai / Williamson, Nicholas / Zheng, Yuanting / Young, Neil D / Korhonen, Pasi K / Hofmann, Andreas / Wells, Tim N C / Jabbar, Abdul / Sleebs, Brad E / Gasser, Robin B

    Bioorganic & medicinal chemistry

    2023  Volume 98, Page(s) 117540

    Abstract: Global challenges with treatment failures and/or widespread resistance in parasitic worms against commercially available anthelmintics lend impetus to the development of new anthelmintics with novel mechanism(s) of action. The free-living nematode ... ...

    Abstract Global challenges with treatment failures and/or widespread resistance in parasitic worms against commercially available anthelmintics lend impetus to the development of new anthelmintics with novel mechanism(s) of action. The free-living nematode Caenorhabditis elegans is an important model organism used for drug discovery, including the screening and structure-activity investigation of new compounds, and target deconvolution. Previously, we conducted a whole-organism phenotypic screen of the 'Pandemic Response Box' (from Medicines for Malaria Venture, MMV) and identified a hit compound, called ABX464, with activity against C. elegans and a related, parasitic nematode, Haemonchus contortus. Here, we tested a series of 44 synthesized analogues to explore the pharmacophore of activity on C. elegans and revealed five compounds whose potency was similar or greater than that of ABX464, but which were not toxic to human hepatoma (HepG2) cells. Subsequently, we employed thermal proteome profiling (TPP), protein structure prediction and an in silico-docking algorithm to predict ABX464-target candidates. Taken together, the findings from this study contribute significantly to the early-stage drug discovery of a new nematocide based on ABX464. Future work is aimed at validating the ABX464-protein interactions identified here, and at assessing ABX464 and associated analogues against a panel of parasitic nematodes, towards developing a new anthelmintic with a mechanism of action that is distinct from any of the compounds currently-available commercially.
    MeSH term(s) Animals ; Humans ; Caenorhabditis elegans ; Nematoda ; Anthelmintics/pharmacology ; Anthelmintics/chemistry ; Structure-Activity Relationship ; Quinolines
    Chemical Substances ABX464 ; Anthelmintics ; Quinolines
    Language English
    Publishing date 2023-12-03
    Publishing country England
    Document type Journal Article
    ZDB-ID 1161284-8
    ISSN 1464-3391 ; 0968-0896
    ISSN (online) 1464-3391
    ISSN 0968-0896
    DOI 10.1016/j.bmc.2023.117540
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  8. Article ; Online: The Proteome and Lipidome of Extracellular Vesicles from Haemonchus contortus to Underpin Explorations of Host–Parasite Cross–Talk

    Tao Wang / Tiana F. Koukoulis / Laura J. Vella / Huaqi Su / Adityas Purnianto / Shuai Nie / Ching-Seng Ang / Guangxu Ma / Pasi K. Korhonen / Aya C. Taki / Nicholas A. Williamson / Gavin E. Reid / Robin B. Gasser

    International Journal of Molecular Sciences, Vol 24, Iss 10955, p

    2023  Volume 10955

    Abstract: ... We identified unique molecules in EVs, such as proteins linked to lipid transportation and lipid species (i.e ...

    Abstract Many parasitic worms have a major adverse impact on human and animal populations worldwide due to the chronicity of their infections. There is a growing body of evidence indicating that extracellular vesicles (EVs) are intimately involved in modulating (suppressing) inflammatory/immune host responses and parasitism. As one of the most pathogenic nematodes of livestock animals, Haemonchus contortus is an ideal model system for EV exploration. Here, employing a multi-step enrichment process (in vitro culture, followed by ultracentrifugation, size exclusion and filtration), we enriched EVs from H. contortus and undertook the first comprehensive (qualitative and quantitative) multi-omic investigation of EV proteins and lipids using advanced liquid chromatography–mass spectrometry and informatics methods. We identified and quantified 561 proteins and 446 lipids in EVs and compared these molecules with those of adult worms. We identified unique molecules in EVs, such as proteins linked to lipid transportation and lipid species (i.e., sphingolipids) associated with signalling, indicating the involvement of these molecules in parasite-host cross-talk. This work provides a solid starting point to explore the functional roles of EV-specific proteins and lipids in modulating parasite-host cross-talk, and the prospect of finding ways of disrupting or interrupting this relationship to suppress or eliminate parasite infection.
    Keywords parasitic nematode ; Haemonchus contortus ; proteomics ; lipidomics ; LC-MS/MS ; host-parasite interactions ; Biology (General) ; QH301-705.5 ; Chemistry ; QD1-999
    Subject code 572
    Language English
    Publishing date 2023-06-01T00:00:00Z
    Publisher MDPI AG
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  9. Article ; Online: Quantitative lipidomic analysis of Ascaris suum.

    Wang, Tao / Nie, Shuai / Ma, Guangxu / Vlaminck, Johnny / Geldhof, Peter / Williamson, Nicholas A / Reid, Gavin E / Gasser, Robin B

    PLoS neglected tropical diseases

    2020  Volume 14, Issue 12, Page(s) e0008848

    Abstract: ... abundance of lipids with key roles in cellular processes and functions (e.g. energy storage regulation and ...

    Abstract Ascaris is a soil-transmitted nematode that causes ascariasis, a neglected tropical disease affecting predominantly children and adolescents in the tropics and subtropics. Approximately 0.8 billion people are affected worldwide, equating to 0.86 million disability-adjusted life-years (DALYs). Exploring the molecular biology of Ascaris is important to gain a better understanding of the host-parasite interactions and disease processes, and supports the development of novel interventions. Although advances have been made in the genomics, transcriptomics and proteomics of Ascaris, its lipidome has received very limited attention. Lipidomics is an important sub-discipline of systems biology, focused on exploring lipids profiles in tissues and cells, and elucidating their biological and metabolic roles. Here, we characterised the lipidomes of key developmental stages and organ systems of Ascaris of porcine origin via high throughput LC-MS/MS. In total, > 500 lipid species belonging to 18 lipid classes within three lipid categories were identified and quantified-in precise molar amounts in relation to the dry weight of worm material-in different developmental stages/sexes and organ systems. The results showed substantial differences in the composition and abundance of lipids with key roles in cellular processes and functions (e.g. energy storage regulation and membrane structure) among distinct stages and among organ systems, likely reflecting differing demands for lipids, depending on stage of growth and development as well as the need to adapt to constantly changing environments within and outside of the host animal. This work provides the first step toward understanding the biology of lipids in Ascaris, with possibilities to work toward designing new interventions against ascariasis.
    MeSH term(s) Animals ; Ascaris suum/chemistry ; Chromatography, Liquid ; Lipidomics ; Lipids/chemistry ; Mass Spectrometry
    Chemical Substances Lipids
    Language English
    Publishing date 2020-12-02
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2429704-5
    ISSN 1935-2735 ; 1935-2727
    ISSN (online) 1935-2735
    ISSN 1935-2727
    DOI 10.1371/journal.pntd.0008848
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: SmallSats

    David J. Curnick / Alasdair J. Davies / Clare Duncan / Robin Freeman / David M. P. Jacoby / Hugo T. E. Shelley / Cristian Rossi / Oliver R. Wearn / Michael J. Williamson / Nathalie Pettorelli

    Remote Sensing in Ecology and Conservation, Vol 8, Iss 2, Pp 139-

    a new technological frontier in ecology and conservation?

    2022  Volume 150

    Abstract: ... and advancement of small satellites (or SmallSats, i.e., satellites <180 kg). Here, we review ... as they unfold, while enhancing our understanding of animal ecology and ecosystem dynamics. However, significant ...

    Abstract Abstract We are in the midst of a revolution in satellite technology, with the rapid development and advancement of small satellites (or SmallSats, i.e., satellites <180 kg). Here, we review the opportunities and challenges that such technology might afford in the field of conservation and ecology. SmallSat constellations may yield higher resolutions than those that are currently available to scientists and practitioners, increasing opportunities to improve environmental‐monitoring and animal‐tracking capabilities. They may cut access costs to end users, by reducing operational costs and bringing increased competition to the existing market. Their greater flexibility and affordability may moreover enable the development of bespoke constellations for specific conservation and ecological applications, and provide greater interoperability with ground‐based sensors, such as tracking devices and camera traps. In addition, SmallSats may serve as cost‐effective research and development platforms for new components and products. Combined, these benefits could significantly improve our ability to monitor threats to the environment as they unfold, while enhancing our understanding of animal ecology and ecosystem dynamics. However, significant hardware and software developments are required before such technology is able to produce, process and handle reliable and cost‐effective data, and the initial research and development costs still represent a major challenge. Further, we argue that much remains to be done to ensure these new data products become accessible, equitable and sustainable.
    Keywords Biotelemetry ; earth observation ; nanosatellites ; optical imagery ; remote sensing ; small satellites ; Technology ; T ; Ecology ; QH540-549.5
    Subject code 333
    Language English
    Publishing date 2022-04-01T00:00:00Z
    Publisher Wiley
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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