LIVIVO - The Search Portal for Life Sciences

zur deutschen Oberfläche wechseln
Advanced search

Search results

Result 1 - 10 of total 164

Search options

  1. Article ; Online: Gold complexes with remote-substituted amino N-heterocyclic carbenes.

    Vanden Broeck, Sofie M P / Tzouras, Nikolaos V / Saab, Marina / Van Hecke, Kristof / Dereli, Busra / Ritacco, Ida / Cavallo, Luigi / Vougioukalakis, Georgios C / Braunstein, Pierre / Nolan, Steven P / Danopoulos, Andreas A / Cazin, Catherine S J

    Dalton transactions (Cambridge, England : 2003)

    2023  Volume 52, Issue 29, Page(s) 9908–9912

    Abstract: The 4-RN-1,3- ... ...

    Abstract The 4-RN-1,3-Ar
    Language English
    Publishing date 2023-07-25
    Publishing country England
    Document type Journal Article
    ZDB-ID 1472887-4
    ISSN 1477-9234 ; 1364-5447 ; 0300-9246 ; 1477-9226
    ISSN (online) 1477-9234 ; 1364-5447
    ISSN 0300-9246 ; 1477-9226
    DOI 10.1039/d3dt02086j
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  2. Article ; Online: The anticancer activity of an air-stable Pd(I)-NHC (NHC = N-heterocyclic carbene) dimer.

    Scattolin, Thomas / Bortolamiol, Enrica / Palazzolo, Stefano / Caligiuri, Isabella / Perin, Tiziana / Canzonieri, Vincenzo / Demitri, Nicola / Rizzolio, Flavio / Cavallo, Luigi / Dereli, Busra / Mane, Manoj V / Nolan, Steven P / Visentin, Fabiano

    Chemical communications (Cambridge, England)

    2020  Volume 56, Issue 81, Page(s) 12238–12241

    Abstract: A new dinuclear Pd(i) complex coordinating two bis(NHC) ligands revealed an unsuspected stability despite the unsaturation of the two metal centres. Even more surprisingly, the compound showed high and selective antiproliferative activity against ... ...

    Abstract A new dinuclear Pd(i) complex coordinating two bis(NHC) ligands revealed an unsuspected stability despite the unsaturation of the two metal centres. Even more surprisingly, the compound showed high and selective antiproliferative activity against different cancer cell lines and ovarian cancer tumoroids, and the mechanism of action was different from that of cisplatin.
    MeSH term(s) Antineoplastic Agents/chemical synthesis ; Antineoplastic Agents/chemistry ; Antineoplastic Agents/pharmacology ; Cell Line, Tumor ; Cell Proliferation/drug effects ; Cell Survival/drug effects ; Coordination Complexes/chemical synthesis ; Coordination Complexes/chemistry ; Coordination Complexes/pharmacology ; Dimerization ; Dose-Response Relationship, Drug ; Drug Screening Assays, Antitumor ; Heterocyclic Compounds/chemistry ; Heterocyclic Compounds/pharmacology ; Humans ; Methane/analogs & derivatives ; Methane/chemistry ; Methane/pharmacology ; Molecular Structure ; Palladium/chemistry ; Palladium/pharmacology ; Structure-Activity Relationship
    Chemical Substances Antineoplastic Agents ; Coordination Complexes ; Heterocyclic Compounds ; carbene (2465-56-7) ; Palladium (5TWQ1V240M) ; Methane (OP0UW79H66)
    Language English
    Publishing date 2020-09-22
    Publishing country England
    Document type Journal Article
    ZDB-ID 1472881-3
    ISSN 1364-548X ; 1359-7345 ; 0009-241X
    ISSN (online) 1364-548X
    ISSN 1359-7345 ; 0009-241X
    DOI 10.1039/d0cc03883k
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  3. Article ; Online: The AAA+ ATPase TRIP13 remodels HORMA domains through N-terminal engagement and unfolding.

    Ye, Qiaozhen / Kim, Dong Hyun / Dereli, Ihsan / Rosenberg, Scott C / Hagemann, Goetz / Herzog, Franz / Tóth, Attila / Cleveland, Don W / Corbett, Kevin D

    The EMBO journal

    2017  Volume 36, Issue 16, Page(s) 2419–2434

    Abstract: Proteins of the conserved HORMA domain family, including the spindle assembly checkpoint protein MAD2 and the meiotic HORMADs, assemble into signaling complexes by binding short peptides termed "closure motifs". The AAA+ ATPase TRIP13 regulates both MAD2 ...

    Abstract Proteins of the conserved HORMA domain family, including the spindle assembly checkpoint protein MAD2 and the meiotic HORMADs, assemble into signaling complexes by binding short peptides termed "closure motifs". The AAA+ ATPase TRIP13 regulates both MAD2 and meiotic HORMADs by disassembling these HORMA domain-closure motif complexes, but its mechanisms of substrate recognition and remodeling are unknown. Here, we combine X-ray crystallography and crosslinking mass spectrometry to outline how TRIP13 recognizes MAD2 with the help of the adapter protein p31
    MeSH term(s) ATPases Associated with Diverse Cellular Activities ; Adaptor Proteins, Signal Transducing/metabolism ; Adenosine Triphosphate/metabolism ; Carrier Proteins/metabolism ; Cell Cycle Proteins/metabolism ; Crystallography, X-Ray ; Humans ; Mad2 Proteins/metabolism ; Mass Spectrometry ; Models, Molecular ; Nuclear Proteins/metabolism ; Protein Conformation ; Protein Unfolding
    Chemical Substances Adaptor Proteins, Signal Transducing ; Carrier Proteins ; Cell Cycle Proteins ; MAD2L1 protein, human ; MAD2L1BP protein, human ; Mad2 Proteins ; Nohma protein, mouse ; Nuclear Proteins ; Adenosine Triphosphate (8L70Q75FXE) ; ATPases Associated with Diverse Cellular Activities (EC 3.6.4.-) ; TRIP13 protein, human (EC 3.6.4.-)
    Language English
    Publishing date 2017-06-28
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 586044-1
    ISSN 1460-2075 ; 0261-4189
    ISSN (online) 1460-2075
    ISSN 0261-4189
    DOI 10.15252/embj.201797291
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  4. Article: The anticancer activity of an air-stable Pd(i)-NHC (NHC = N-heterocyclic carbene) dimer

    Scattolin, Thomas / Bortolamiol, Enrica / Palazzolo, Stefano / Caligiuri, Isabella / Perin, Tiziana / Canzonieri, Vincenzo / Demitri, Nicola / Rizzolio, Flavio / Cavallo, Luigi / Dereli, Busra / Mane, Manoj V / Nolan, Steven P / Visentin, Fabiano

    Chemical communications. 2020 Oct. 13, v. 56, no. 81

    2020  

    Abstract: A new dinuclear Pd(i) complex coordinating two bis(NHC) ligands revealed an unsuspected stability despite the unsaturation of the two metal centres. Even more surprisingly, the compound showed high and selective antiproliferative activity against ... ...

    Abstract A new dinuclear Pd(i) complex coordinating two bis(NHC) ligands revealed an unsuspected stability despite the unsaturation of the two metal centres. Even more surprisingly, the compound showed high and selective antiproliferative activity against different cancer cell lines and ovarian cancer tumoroids, and the mechanism of action was different from that of cisplatin.
    Keywords antineoplastic activity ; carbenes ; cisplatin ; heterocyclic nitrogen compounds ; ligands ; mechanism of action ; neoplasm cells ; ovarian neoplasms
    Language English
    Dates of publication 2020-1013
    Size p. 12238-12241.
    Publishing place The Royal Society of Chemistry
    Document type Article
    Note NAL-AP-2-clean
    ZDB-ID 1472881-3
    ISSN 1364-548X ; 1359-7345 ; 0009-241X
    ISSN (online) 1364-548X
    ISSN 1359-7345 ; 0009-241X
    DOI 10.1039/d0cc03883k
    Database NAL-Catalogue (AGRICOLA)

    More links

    Kategorien

  5. Article ; Online: Galaninergic and hypercapnia-activated neuronal projections to the ventral respiratory column.

    Dereli, Ayse S / Oh, Alice Y S / McMullan, Simon / Kumar, Natasha N

    Brain structure & function

    2024  

    Abstract: In mammals, the ventral respiratory column (VRC) plays a pivotal role in integrating neurochemically diverse inputs from brainstem and forebrain regions to generate respiratory motor patterns. VRC microinjection of the neuropeptide galanin has been ... ...

    Abstract In mammals, the ventral respiratory column (VRC) plays a pivotal role in integrating neurochemically diverse inputs from brainstem and forebrain regions to generate respiratory motor patterns. VRC microinjection of the neuropeptide galanin has been reported to dampen carbon dioxide (CO
    Language English
    Publishing date 2024-04-05
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2273162-3
    ISSN 1863-2661 ; 1863-2653
    ISSN (online) 1863-2661
    ISSN 1863-2653
    DOI 10.1007/s00429-024-02782-8
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  6. Article ; Online: A Unifying Method to Study Respiratory Sinus Arrhythmia Dynamics Implemented in a New Toolbox.

    Ghibaudo, Valentin / Granget, Jules / Dereli, Matthias / Buonviso, Nathalie / Garcia, Samuel

    eNeuro

    2023  Volume 10, Issue 10

    Abstract: Respiratory sinus arrhythmia (RSA), the natural variation in heart rate synchronized with respiration, has been extensively studied in emotional and cognitive contexts. Various time or frequency-based methods using the cardiac signal have been proposed ... ...

    Abstract Respiratory sinus arrhythmia (RSA), the natural variation in heart rate synchronized with respiration, has been extensively studied in emotional and cognitive contexts. Various time or frequency-based methods using the cardiac signal have been proposed to analyze RSA. In this study, we present a novel approach that combines respiratory phase and heart rate to enable a more detailed analysis of RSA and its dynamics throughout the respiratory cycle. To facilitate the application of this method, we have implemented it in an open-source Python toolbox called physio This toolbox includes essential functionalities for processing electrocardiogram (ECG) and respiratory signals, while also introducing this new approach for RSA analysis. Inspired by previous research conducted by our group, this method enables a cycle-by-cycle analysis of RSA providing the possibility to correlate any respiratory feature to any RSA feature. By employing this approach, we aim to gain a more accurate understanding of the neural mechanisms associated with RSA.
    MeSH term(s) Humans ; Respiratory Sinus Arrhythmia ; Arrhythmia, Sinus ; Respiration ; Heart ; Electrocardiography ; Heart Rate/physiology
    Language English
    Publishing date 2023-10-27
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2800598-3
    ISSN 2373-2822 ; 2373-2822
    ISSN (online) 2373-2822
    ISSN 2373-2822
    DOI 10.1523/ENEURO.0197-23.2023
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  7. Article ; Online: Combining Multiplex Fluorescence in situ Hybridization with Fluorescent Immunohistochemistry on Fresh Frozen or Fixed Mouse Brain Sections.

    Dereli, Ayse S / Bailey, Evan J / Kumar, Natasha N

    Journal of visualized experiments : JoVE

    2021  , Issue 172

    Abstract: Fluorescent in situ hybridization (FISH) is a molecular technique that identifies the presence and spatial distribution of specific RNA transcripts within cells. Neurochemical phenotyping of functionally identified neurons usually requires concurrent ... ...

    Abstract Fluorescent in situ hybridization (FISH) is a molecular technique that identifies the presence and spatial distribution of specific RNA transcripts within cells. Neurochemical phenotyping of functionally identified neurons usually requires concurrent labelling with multiple antibodies (targeting protein) using immunohistochemistry (IHC) and optimization of in situ hybridization (targeting RNA), in tandem. A "neurochemical signature" to characterize particular neurons may be achieved however complicating factors include the need to verify FISH and IHC targets before combining the methods, and the limited number of RNAs and proteins that may be targeted simultaneously within the same tissue section. Here we describe a protocol, using both fresh frozen and fixed mouse brain preparations, which detects multiple mRNAs and proteins in the same brain section using RNAscope FISH followed by fluorescence immunostaining, respectively. We use the combined method to describe the expression pattern of low abundance mRNAs (e.g., galanin receptor 1) and high abundance mRNAs (e.g., glycine transporter 2), in immunohistochemically identified brainstem nuclei. Key considerations for protein labelling downstream of the FISH assay extend beyond tissue preparation and optimization of FISH probe labelling. For example, we found that antibody binding and labelling specificity can be detrimentally affected by the protease step within the FISH probe assay. Proteases catalyze hydrolytic cleavage of peptide bonds, facilitating FISH probe entry into cells, however they may also digest the protein targeted by the subsequent IHC assay, producing off target binding. The subcellular location of the targeted protein is another factor contributing to IHC success following FISH probe assay. We observed IHC specificity to be retained when the targeted protein is membrane bound, whereas IHC targeting cytoplasmic protein required extensive troubleshooting. Finally, we found handling of slide-mounted fixed frozen tissue more challenging than fresh frozen tissue, however IHC quality was overall better with fixed frozen tissue, when combined with RNAscope.
    MeSH term(s) Animals ; Brain ; Immunohistochemistry ; In Situ Hybridization, Fluorescence ; Mice ; RNA ; RNA, Messenger
    Chemical Substances RNA, Messenger ; RNA (63231-63-0)
    Language English
    Publishing date 2021-06-25
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Video-Audio Media
    ZDB-ID 2259946-0
    ISSN 1940-087X ; 1940-087X
    ISSN (online) 1940-087X
    ISSN 1940-087X
    DOI 10.3791/61709
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  8. Article: Management of Cardiac Surgery in a Pandemic Region Hospital: Precautions, Results and Experiences During COVID-19.

    Isik, Mehmet / Yıldırım, Serkan / Dereli, Yüksel / Tanyeli, Omer / Görmüş, Niyazi

    The Eurasian journal of medicine

    2022  Volume 53, Issue 3, Page(s) 208–213

    Abstract: Objective: The aim of the present study was to share the experiences gained from emergency and semiemergency cases of open heart surgery performed during the COVID-19 outbreak in Necmettin Erbakan University Meram Medical Faculty Hospital, which was ... ...

    Abstract Objective: The aim of the present study was to share the experiences gained from emergency and semiemergency cases of open heart surgery performed during the COVID-19 outbreak in Necmettin Erbakan University Meram Medical Faculty Hospital, which was defined as a pandemic hospital by Turkish Ministry of Health and provided third degree health services.
    Materials and methods: A total of 54 patients were retrospectively analyzed between 23 March and 22 May 2020, who were diagnosed to have aortic dissection, coronary artery disease, and heart valve diseases.
    Results: Thirty-two CABG, 12 valve surgery, 6 aortic surgery, 4 CABG + valve surgeries were performed. During the postoperative follow-up of 11 patients, who were suspicious of COVID-19, 8 of them displayed respiratory problems and partial oxygen depletion and required continuous positive airway pressure. The hospitalization duration of COVID-19-suspicious patients were approximately 5 days longer than that of normal patients. In one of the patient, who was treated positive for COVID-19, acute coronary syndrome developed and CABG was performed following the treatment.
    Conclusion: During the pandemic period, acute cardiac diseases needing urgent surgery could be misdiagnosed because of similar symptoms with COVID-19 and the health care practitioners concentrated with the COVID-19 primarily. On the other hand, pandemic fear could cause delayed admission to the hospital and increased postoperative mortality and morbidity. When a COVID-19-positive or -suspicious patient undergo open-heart surgery, problems resulting from both COVID-19 infection and cardiopulmonary bypass-associated systemic effects could arise. The combination of these two cases could worsen the complications.
    Language English
    Publishing date 2022-01-14
    Publishing country Turkey
    Document type Journal Article
    ZDB-ID 2577670-8
    ISSN 1308-8742 ; 1308-8734
    ISSN (online) 1308-8742
    ISSN 1308-8734
    DOI 10.5152/eurasianjmed.2021.20290
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  9. Article ; Online: Levinsenia species (Annelida: Polychaeta: Paraonidae) from the Sea of Marmara with descriptions of two new species.

    Erdoğan-Dereli, Deniz / Çinar, Melih Ertan

    Zootaxa

    2021  Volume 4908, Issue 2, Page(s) zootaxa.4908.2.1

    Abstract: ... stations in 2013. Among the material, two new species, namely Levinsenia longobranchiata n. sp. and L ... vulgaris n. sp., and five already known species (L. demiri, L. kosswigi, L. materi, L. marmarensis, L ... tribranchiata) were found. Levinsenia longobranchiata n. sp. is mainly characterized by having very long ...

    Abstract The present study deals with the diversity of the genus Levinsenia in the Sea of Marmara. The specimens of Levinsenia were collected on soft and hard substrata at depths ranging from 10 to 500 m at 98 stations in 2013. Among the material, two new species, namely Levinsenia longobranchiata n. sp. and L. vulgaris n. sp., and five already known species (L. demiri, L. kosswigi, L. materi, L. marmarensis, L. tribranchiata) were found. Levinsenia longobranchiata n. sp. is mainly characterized by having very long branchiae (longer than the body width) and five prebranchial chaetigers without notopodial postchaetal lobes. Levinsenia vulgaris n. sp. is mainly characterized by having short branchiae (shorter than the body width) and five prebranchial chaetigers with notopodial postchaetal lobes. The SEM images enabled us to define some previously neglected/indistinct characters in the taxonomy of Levinsenia such as the degree of the fusion of the branchiae with the notopodia; the morphology of dorso-lateral irregular pores, cheek organ, ciliated patches and lateral organs on the lateral sides of the prostomium; and the shape and distribution of the lateral sense organs along the body. All species found in the region were presented and described, by also taking these novel characters into account.
    MeSH term(s) Animals ; Annelida ; Polychaeta
    Language English
    Publishing date 2021-01-14
    Publishing country New Zealand
    Document type Journal Article
    ISSN 1175-5334
    ISSN (online) 1175-5334
    DOI 10.11646/zootaxa.4908.2.1
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  10. Article ; Online: Are we aware of COVID-19-related acute kidney injury in intensive care units?

    Dereli, N / Babayigit, M / Menteş, O / Koç, F / Ari, O / Doğan, E / Onhan, E

    European review for medical and pharmacological sciences

    2022  Volume 26, Issue 5, Page(s) 1753–1760

    Abstract: ... year period.: Patients and methods: The files of patients with COVID-19 (n=220) who were treated ...

    Abstract Objective: Coronavirus disease-19 (COVID-19) primarily affects the respiratory system. In some cases, the heart, kidney, liver, circulatory system, and nervous system are also affected. COVID-19-related acute kidney injury (AKI) occurs in more than 20% of hospitalized patients and more than 50% of patients in the intensive care unit (ICU). In this study, we aimed to review the prevalence of COVID-19-related acute kidney injury, risk factors, hospital and ICU length of stay, the need for renal replacement therapy. We also examined the effect of AKI on mortality in patients in the ICU that we treated during a 1-year period.
    Patients and methods: The files of patients with COVID-19 (n=220) who were treated in our ICU between March 21st, 2020, and June 1st, 2021, were analyzed retrospectively. Demographic data of the patients, laboratory data, and treatments were examined. Patients were divided into two groups, group I patients without AKI and, group II patients with AKI. The patients with AKI were evaluated according to the theKidney Disease Improving Global Outcomes (KDIGO) classification and were graded.
    Results: Of the 220 patients included in the study, 89 were female and 131 were male. The mean age of patients with AKI (70.92±11.28 years) was statistically significantly higher than among those without AKI (58.87±13.63 years) (p<0.001). In patients with AKI, ICU length of stay, Acute Physiology and Chronic Health Evaluation (APACHE) II scores, initial lactate levels, need for mechanical ventilation, duration of mechanical ventilation, and secondary infection rates were found to be statistically significantly higher. Discharge rates from the ICU in patients without AKI were statistically higher (75.3% vs. 26.6%), and mortality rates were significantly higher in patients with AKI (67.8% vs. 14.3%).
    Conclusions: Various studies conducted have shown that patients with COVID-19 are at risk for AKI, and this is closely related to age, sex, and disease severity. The presence of AKI in patients with COVID-19 increases mortality, and this is more evident in patients hospitalized in the ICU. In our study, the prevalence of AKI was higher in older patients with high APACHE II scores and initial lactate levels. Comorbidities such as hypertension, chronic kidney disease, and coronary artery disease in patients with AKI were higher than in those without AKI.
    MeSH term(s) APACHE ; Acute Kidney Injury/etiology ; Acute Kidney Injury/therapy ; Age Factors ; Aged ; Aged, 80 and over ; COVID-19/complications ; COVID-19/mortality ; Cross Infection/complications ; Female ; Humans ; Intensive Care Units ; Lactic Acid/blood ; Male ; Middle Aged ; Prevalence ; Respiration, Artificial ; Retrospective Studies ; Sex Factors
    Chemical Substances Lactic Acid (33X04XA5AT)
    Language English
    Publishing date 2022-03-18
    Publishing country Italy
    Document type Journal Article
    ZDB-ID 605550-3
    ISSN 2284-0729 ; 1128-3602 ; 0392-291X
    ISSN (online) 2284-0729
    ISSN 1128-3602 ; 0392-291X
    DOI 10.26355/eurrev_202203_28245
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

To top