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  1. Article ; Online: COVID-Net L2C-ULTRA: An Explainable Linear-Convex Ultrasound Augmentation Learning Framework to Improve COVID-19 Assessment and Monitoring.

    Zeng, E Zhixuan / Ebadi, Ashkan / Florea, Adrian / Wong, Alexander

    Sensors (Basel, Switzerland)

    2024  Volume 24, Issue 5

    Abstract: While no longer a public health emergency of international concern, COVID-19 remains an established and ongoing global health threat. As the global population continues to face significant negative impacts of the pandemic, there has been an increased ... ...

    Abstract While no longer a public health emergency of international concern, COVID-19 remains an established and ongoing global health threat. As the global population continues to face significant negative impacts of the pandemic, there has been an increased usage of point-of-care ultrasound (POCUS) imaging as a low-cost, portable, and effective modality of choice in the COVID-19 clinical workflow. A major barrier to the widespread adoption of POCUS in the COVID-19 clinical workflow is the scarcity of expert clinicians who can interpret POCUS examinations, leading to considerable interest in artificial intelligence-driven clinical decision support systems to tackle this challenge. A major challenge to building deep neural networks for COVID-19 screening using POCUS is the heterogeneity in the types of probes used to capture ultrasound images (e.g., convex vs. linear probes), which can lead to very different visual appearances. In this study, we propose an analytic framework for COVID-19 assessment able to consume ultrasound images captured by linear and convex probes. We analyze the impact of leveraging extended linear-convex ultrasound augmentation learning on producing enhanced deep neural networks for COVID-19 assessment, where we conduct data augmentation on convex probe data alongside linear probe data that have been transformed to better resemble convex probe data. The proposed explainable framework, called COVID-Net L2C-ULTRA, employs an efficient deep columnar anti-aliased convolutional neural network designed via a machine-driven design exploration strategy. Our experimental results confirm that the proposed extended linear-convex ultrasound augmentation learning significantly increases performance, with a gain of 3.9% in test accuracy and 3.2% in AUC, 10.9% in recall, and 4.4% in precision. The proposed method also demonstrates a much more effective utilization of linear probe images through a 5.1% performance improvement in recall when such images are added to the training dataset, while all other methods show a decrease in recall when trained on the combined linear-convex dataset. We further verify the validity of the model by assessing what the network considers to be the critical regions of an image with our contribution clinician.
    MeSH term(s) Humans ; Artificial Intelligence ; COVID-19 ; Learning ; Ultrasonography ; Decision Support Systems, Clinical
    Language English
    Publishing date 2024-03-04
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2052857-7
    ISSN 1424-8220 ; 1424-8220
    ISSN (online) 1424-8220
    ISSN 1424-8220
    DOI 10.3390/s24051664
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: COVID-Net USPro: An Explainable Few-Shot Deep Prototypical Network for COVID-19 Screening Using Point-of-Care Ultrasound.

    Song, Jessy / Ebadi, Ashkan / Florea, Adrian / Xi, Pengcheng / Tremblay, Stéphane / Wong, Alexander

    Sensors (Basel, Switzerland)

    2023  Volume 23, Issue 5

    Abstract: As the Coronavirus Disease 2019 (COVID-19) continues to impact many aspects of life and the global healthcare systems, the adoption of rapid and effective screening methods to prevent the further spread of the virus and lessen the burden on healthcare ... ...

    Abstract As the Coronavirus Disease 2019 (COVID-19) continues to impact many aspects of life and the global healthcare systems, the adoption of rapid and effective screening methods to prevent the further spread of the virus and lessen the burden on healthcare providers is a necessity. As a cheap and widely accessible medical image modality, point-of-care ultrasound (POCUS) imaging allows radiologists to identify symptoms and assess severity through visual inspection of the chest ultrasound images. Combined with the recent advancements in computer science, applications of deep learning techniques in medical image analysis have shown promising results, demonstrating that artificial intelligence-based solutions can accelerate the diagnosis of COVID-19 and lower the burden on healthcare professionals. However, the lack of large, well annotated datasets poses a challenge in developing effective deep neural networks, especially in the case of rare diseases and new pandemics. To address this issue, we present COVID-Net USPro, an explainable few-shot deep prototypical network that is designed to detect COVID-19 cases from very few ultrasound images. Through intensive quantitative and qualitative assessments, the network not only demonstrates high performance in identifying COVID-19 positive cases, using an explainability component, but it is also shown that the network makes decisions based on the actual representative patterns of the disease. Specifically, COVID-Net USPro achieves 99.55% overall accuracy, 99.93% recall, and 99.83% precision for COVID-19-positive cases when trained with only five shots. In addition to the quantitative performance assessment, our contributing clinician with extensive experience in POCUS interpretation verified the analytic pipeline and results, ensuring that the network's decisions are based on clinically relevant image patterns integral to COVID-19 diagnosis. We believe that network explainability and clinical validation are integral components for the successful adoption of deep learning in the medical field. As part of the COVID-Net initiative, and to promote reproducibility and foster further innovation, the network is open-sourced and available to the public.
    MeSH term(s) Artificial Intelligence ; COVID-19 ; COVID-19 Testing ; Deep Learning ; Point-of-Care Systems ; Reproducibility of Results ; SARS-CoV-2
    Language English
    Publishing date 2023-02-27
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2052857-7
    ISSN 1424-8220 ; 1424-8220
    ISSN (online) 1424-8220
    ISSN 1424-8220
    DOI 10.3390/s23052621
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Book ; Online: Detecting Emerging Technologies in Artificial Intelligence Scientific Ecosystem Using an Indicator-based Model

    Ghaemmaghami, Ali / Schiffauerova, Andrea / Ebadi, Ashkan

    2022  

    Abstract: Early identification of emergent topics is of eminent importance due to their potential impacts on society. There are many methods for detecting emerging terms and topics, all with advantages and drawbacks. However, there is no consensus about the ... ...

    Abstract Early identification of emergent topics is of eminent importance due to their potential impacts on society. There are many methods for detecting emerging terms and topics, all with advantages and drawbacks. However, there is no consensus about the attributes and indicators of emergence. In this study, we evaluate emerging topic detection in the field of artificial intelligence using a new method to evaluate emergence. We also introduce two new attributes of collaboration and technological impact which can help us use both paper and patent information simultaneously. Our results confirm that the proposed new method can successfully identify the emerging topics in the period of the study. Moreover, this new method can provide us with the score of each attribute and a final emergence score, which enable us to rank the emerging topics with their emergence scores and each attribute score.
    Keywords Computer Science - Digital Libraries ; Computer Science - Artificial Intelligence ; Computer Science - Computation and Language ; Computer Science - Social and Information Networks
    Subject code 001
    Publishing date 2022-10-06
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  4. Book ; Online: Women, artificial intelligence, and key positions in collaboration networks

    Hajibabaei, Anahita / Schiffauerova, Andrea / Ebadi, Ashkan

    Towards a more equal scientific ecosystem

    2022  

    Abstract: Scientific collaboration in almost every discipline is mainly driven by the need of sharing knowledge, expertise, and pooled resources. Science is becoming more complex which has encouraged scientists to involve more in collaborative research projects in ...

    Abstract Scientific collaboration in almost every discipline is mainly driven by the need of sharing knowledge, expertise, and pooled resources. Science is becoming more complex which has encouraged scientists to involve more in collaborative research projects in order to better address the challenges. As a highly interdisciplinary field with a rapidly evolving scientific landscape, artificial intelligence calls for researchers with special profiles covering a diverse set of skills and expertise. Understanding gender aspects of scientific collaboration is of paramount importance, especially in a field such as artificial intelligence that has been attracting large investments. Using social network analysis, natural language processing, and machine learning and focusing on artificial intelligence publications for the period from 2000 to 2019, in this work, we comprehensively investigated the effects of several driving factors on acquiring key positions in scientific collaboration networks through a gender lens. It was found that, regardless of gender, scientific performance in terms of quantity and impact plays a crucial in possessing the "social researcher" in the network. However, subtle differences were observed between female and male researchers in acquiring the "local influencer" role.

    Comment: 20 pages, 6 figures
    Keywords Computer Science - Social and Information Networks ; Computer Science - Artificial Intelligence ; Computer Science - Machine Learning
    Subject code 001
    Publishing date 2022-05-19
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  5. Book ; Online: Detecting Emerging Technologies and their Evolution using Deep Learning and Weak Signal Analysis

    Ebadi, Ashkan / Auger, Alain / Gauthier, Yvan

    2022  

    Abstract: Emerging technologies can have major economic impacts and affect strategic stability. Yet, early identification of emerging technologies remains challenging. In order to identify emerging technologies in a timely and reliable manner, a comprehensive ... ...

    Abstract Emerging technologies can have major economic impacts and affect strategic stability. Yet, early identification of emerging technologies remains challenging. In order to identify emerging technologies in a timely and reliable manner, a comprehensive examination of relevant scientific and technological (S&T) trends and their related references is required. This examination is generally done by domain experts and requires significant amounts of time and effort to gain insights. The use of domain experts to identify emerging technologies from S&T trends may limit the capacity to analyse large volumes of information and introduce subjectivity in the assessments. Decision support systems are required to provide accurate and reliable evidence-based indicators through constant and continuous monitoring of the environment and help identify signals of emerging technologies that could alter security and economic prosperity. For example, the research field of hypersonics has recently witnessed several advancements having profound technological, commercial, and national security implications. In this work, we present a multi-layer quantitative approach able to identify future signs from scientific publications on hypersonics by leveraging deep learning and weak signal analysis. The proposed framework can help strategic planners and domain experts better identify and monitor emerging technology trends.

    Comment: 17 pages, 8 figures, 2 tables (preprint version)
    Keywords Computer Science - Artificial Intelligence ; Computer Science - Machine Learning
    Subject code 303
    Publishing date 2022-05-11
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Book ; Online: On the evolution of research in hypersonics

    Ebadi, Ashkan / Auger, Alain / Gauthier, Yvan

    application of natural language processing and machine learning

    2022  

    Abstract: Research and development in hypersonics have progressed significantly in recent years, with various military and commercial applications being demonstrated increasingly. Public and private organizations in several countries have been investing in ... ...

    Abstract Research and development in hypersonics have progressed significantly in recent years, with various military and commercial applications being demonstrated increasingly. Public and private organizations in several countries have been investing in hypersonics, with the aim to overtake their competitors and secure/improve strategic advantage and deterrence. For these organizations, being able to identify emerging technologies in a timely and reliable manner is paramount. Recent advances in information technology have made it possible to analyze large amounts of data, extract hidden patterns, and provide decision-makers with new insights. In this study, we focus on scientific publications about hypersonics within the period of 2000-2020, and employ natural language processing and machine learning to characterize the research landscape by identifying 12 key latent research themes and analyzing their temporal evolution. Our publication similarity analysis revealed patterns that are indicative of cycles during two decades of research. The study offers a comprehensive analysis of the research field and the fact that the research themes are algorithmically extracted removes subjectivity from the exercise and enables consistent comparisons between topics and between time intervals.

    Comment: 18 pages, 9 figures
    Keywords Computer Science - Computation and Language ; Computer Science - Computers and Society ; Computer Science - Machine Learning
    Subject code 001
    Publishing date 2022-08-17
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  7. Article ; Online: Towards Building a Trustworthy Deep Learning Framework for Medical Image Analysis.

    Ma, Kai / He, Siyuan / Sinha, Grant / Ebadi, Ashkan / Florea, Adrian / Tremblay, Stéphane / Wong, Alexander / Xi, Pengcheng

    Sensors (Basel, Switzerland)

    2023  Volume 23, Issue 19

    Abstract: Computer vision and deep learning have the potential to improve medical artificial intelligence (AI) by assisting in diagnosis, prediction, and prognosis. However, the application of deep learning to medical image analysis is challenging due to limited ... ...

    Abstract Computer vision and deep learning have the potential to improve medical artificial intelligence (AI) by assisting in diagnosis, prediction, and prognosis. However, the application of deep learning to medical image analysis is challenging due to limited data availability and imbalanced data. While model performance is undoubtedly essential for medical image analysis, model trust is equally important. To address these challenges, we propose TRUDLMIA, a trustworthy deep learning framework for medical image analysis, which leverages image features learned through self-supervised learning and utilizes a novel surrogate loss function to build trustworthy models with optimal performance. The framework is validated on three benchmark data sets for detecting pneumonia, COVID-19, and melanoma, and the created models prove to be highly competitive, even outperforming those designed specifically for the tasks. Furthermore, we conduct ablation studies, cross-validation, and result visualization and demonstrate the contribution of proposed modules to both model performance (up to 21%) and model trust (up to 5%). We expect that the proposed framework will support researchers and clinicians in advancing the use of deep learning for dealing with public health crises, improving patient outcomes, increasing diagnostic accuracy, and enhancing the overall quality of healthcare delivery.
    MeSH term(s) Humans ; Artificial Intelligence ; COVID-19/diagnosis ; Deep Learning ; Benchmarking ; Melanoma
    Language English
    Publishing date 2023-09-27
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2052857-7
    ISSN 1424-8220 ; 1424-8220
    ISSN (online) 1424-8220
    ISSN 1424-8220
    DOI 10.3390/s23198122
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Book ; Online: COVID-Net UV

    Azimi, Hilda / Ebadi, Ashkan / Song, Jessy / Xi, Pengcheng / Wong, Alexander

    An End-to-End Spatio-Temporal Deep Neural Network Architecture for Automated Diagnosis of COVID-19 Infection from Ultrasound Videos

    2022  

    Abstract: Besides vaccination, as an effective way to mitigate the further spread of COVID-19, fast and accurate screening of individuals to test for the disease is yet necessary to ensure public health safety. We propose COVID-Net UV, an end-to-end hybrid spatio- ... ...

    Abstract Besides vaccination, as an effective way to mitigate the further spread of COVID-19, fast and accurate screening of individuals to test for the disease is yet necessary to ensure public health safety. We propose COVID-Net UV, an end-to-end hybrid spatio-temporal deep neural network architecture, to detect COVID-19 infection from lung point-of-care ultrasound videos captured by convex transducers. COVID-Net UV comprises a convolutional neural network that extracts spatial features and a recurrent neural network that learns temporal dependence. After careful hyperparameter tuning, the network achieves an average accuracy of 94.44% with no false-negative cases for COVID-19 cases. The goal with COVID-Net UV is to assist front-line clinicians in the fight against COVID-19 via accelerating the screening of lung point-of-care ultrasound videos and automatic detection of COVID-19 positive cases.
    Keywords Electrical Engineering and Systems Science - Image and Video Processing ; Computer Science - Computer Vision and Pattern Recognition
    Subject code 006
    Publishing date 2022-05-18
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  9. Book ; Online: COVID-Net USPro

    Song, Jessy / Ebadi, Ashkan / Florea, Adrian / Xi, Pengcheng / Tremblay, Stéphane / Wong, Alexander

    An Open-Source Explainable Few-Shot Deep Prototypical Network to Monitor and Detect COVID-19 Infection from Point-of-Care Ultrasound Images

    2023  

    Abstract: As the Coronavirus Disease 2019 (COVID-19) continues to impact many aspects of life and the global healthcare systems, the adoption of rapid and effective screening methods to prevent further spread of the virus and lessen the burden on healthcare ... ...

    Abstract As the Coronavirus Disease 2019 (COVID-19) continues to impact many aspects of life and the global healthcare systems, the adoption of rapid and effective screening methods to prevent further spread of the virus and lessen the burden on healthcare providers is a necessity. As a cheap and widely accessible medical image modality, point-of-care ultrasound (POCUS) imaging allows radiologists to identify symptoms and assess severity through visual inspection of the chest ultrasound images. Combined with the recent advancements in computer science, applications of deep learning techniques in medical image analysis have shown promising results, demonstrating that artificial intelligence-based solutions can accelerate the diagnosis of COVID-19 and lower the burden on healthcare professionals. However, the lack of a huge amount of well-annotated data poses a challenge in building effective deep neural networks in the case of novel diseases and pandemics. Motivated by this, we present COVID-Net USPro, an explainable few-shot deep prototypical network, that monitors and detects COVID-19 positive cases with high precision and recall from minimal ultrasound images. COVID-Net USPro achieves 99.65% overall accuracy, 99.7% recall and 99.67% precision for COVID-19 positive cases when trained with only 5 shots. The analytic pipeline and results were verified by our contributing clinician with extensive experience in POCUS interpretation, ensuring that the network makes decisions based on actual patterns.

    Comment: 12 pages, 5 figures
    Keywords Electrical Engineering and Systems Science - Image and Video Processing ; Computer Science - Computer Vision and Pattern Recognition ; Computer Science - Machine Learning
    Subject code 006
    Publishing date 2023-01-04
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  10. Article ; Online: How the Export Volume Is Affected by Determinant Factors in a Developing Country?

    Ashkan Ebadi / Azadeh Ebadi

    Research in World Economy, Vol 6, Iss

    2015  Volume 1

    Abstract: The export volume can be regarded as one of the important macroeconomic measures of a country development. Although the international trade volume has been increased significantly during the past years, the share of developing countries is still not ... ...

    Abstract The export volume can be regarded as one of the important macroeconomic measures of a country development. Although the international trade volume has been increased significantly during the past years, the share of developing countries is still not comparable with the developed ones. This paper analyzes the inter-relations among export and some quantitative and qualitative measures in a developing country, i.e. Iran. The focus is more on the exchange rate volatility. For this purpose, multiple regression analysis was preformed over the period of 1961 to 2001. Our results confirm the important role of pricing and non-pricing variables in stimulating the export of the examined country. Moreover, a negative impact of the external shocks was observed especially for the industrial goods export.
    Keywords Economic history and conditions ; HC10-1085 ; Social Sciences ; H
    Language English
    Publishing date 2015-01-01T00:00:00Z
    Publisher Sciedu Press
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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