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  1. Article ; Online: The aberrant gene-end transcription signal of the matrix M gene of human parainfluenza virus type 3 downregulates fusion F protein expression and the F-specific antibody response in vivo.

    Lingemann, Matthias / Surman, Sonja / Amaro-Carambot, Emérito / Schaap-Nutt, Anne / Collins, Peter L / Munir, Shirin

    Journal of virology

    2015  Volume 89, Issue 6, Page(s) 3318–3331

    Abstract: ... transcript of the M gene and the downstream fusion (F) protein gene. We hypothesized that this insert ... may function to downregulate the expression of F protein by interfering with termination/reinitiation at the M ... F gene junction, thus promoting the production of M-F readthrough mRNA at the expense ...

    Abstract Unlabelled: Human parainfluenza virus type 3 (HPIV3), a paramyxovirus, is a major viral cause of severe lower respiratory tract disease in infants and children. The gene-end (GE) transcription signal of the HPIV3 matrix (M) protein gene is identical to those of the nucleoprotein and phosphoprotein genes except that it contains an apparent 8-nucleotide insert. This was associated with an increased synthesis of a readthrough transcript of the M gene and the downstream fusion (F) protein gene. We hypothesized that this insert may function to downregulate the expression of F protein by interfering with termination/reinitiation at the M-F gene junction, thus promoting the production of M-F readthrough mRNA at the expense of monocistronic F mRNA. To test this hypothesis, two similar recombinant HPIV3 viruses from which this insert in the M-GE signal was removed were generated. The M-GE mutants exhibited a reduction in M-F readthrough mRNA and an increase in monocistronic F mRNA. This resulted in a substantial increase in F protein synthesis in infected cells as well as enhanced incorporation of F protein into virions. The efficiency of mutant virus replication was similar to that of wild-type (wt) HPIV3 both in vitro and in vivo. However, the F-protein-specific serum antibody response in hamsters was increased for the mutants compared to wt HPIV3. This study identifies a previously undescribed viral mechanism for attenuating the host adaptive immune response. Repairing the M-GE signal should provide a means to increase the antibody response to a live attenuated HPIV3 vaccine without affecting viral replication and attenuation.
    Importance: The HPIV3 M-GE signal was previously shown to contain an apparent 8-nucleotide insert that was associated with increased synthesis of a readthrough mRNA of the M gene and the downstream F gene. However, whether this had any significant effect on the synthesis of monocistronic F mRNA or F protein, virus replication, virion morphogenesis, and immunogenicity was unknown. Here, we show that the removal of this insert shifts F gene transcription from readthrough M-F mRNA to monocistronic F mRNA. This resulted in a substantial increase in the amount of F protein expressed in the cell and packaged in the virus particle. This did not affect virus replication but increased the F-specific antibody response in hamsters. Thus, in wild-type HPIV3, the aberrant M-GE signal operates a previously undescribed mechanism that reduces the expression of a major neutralization and protective antigen, resulting in reduced immunogenicity. This has implications for the design of live attenuated HPIV3 vaccines; specifically, the antibody response against F can be elevated by "repairing" the M-GE signal to achieve higher-level F antigen expression, with no effect on attenuation.
    MeSH term(s) Animals ; Antibodies, Viral/immunology ; Base Sequence ; Cricetinae ; Down-Regulation ; Gene Expression Regulation, Viral ; Humans ; Mesocricetus ; Molecular Sequence Data ; Parainfluenza Virus 3, Human/genetics ; Parainfluenza Virus 3, Human/immunology ; Respirovirus Infections/immunology ; Respirovirus Infections/virology ; Transcription, Genetic ; Viral Fusion Proteins/genetics ; Viral Fusion Proteins/immunology ; Viral Matrix Proteins/genetics ; Viral Matrix Proteins/immunology
    Chemical Substances Antibodies, Viral ; Viral Fusion Proteins ; Viral Matrix Proteins
    Language English
    Publishing date 2015-03
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Intramural
    ZDB-ID 80174-4
    ISSN 1098-5514 ; 0022-538X
    ISSN (online) 1098-5514
    ISSN 0022-538X
    DOI 10.1128/JVI.03148-14
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Conserved structure of genes encoding components of botulinum neurotoxin complex M and the sequence of the gene coding for the nontoxic component in nonproteolytic Clostridium botulinum type F.

    East, A K / Collins, M D

    Current microbiology

    1994  Volume 29, Issue 2, Page(s) 69–77

    Abstract: ... a DNA fragment from genomic DNA of C. botulinum types A, B, E, F, G and toxigenic strains of Clostridium ... thereby revealing a conserved structure for genes encoding the proteins of the M complex of the progenitor ... botulinum toxin in these organisms. The sequence of the NTNH gene of nonproteolytic C. botulinum type F was ...

    Abstract For investigation of the genes of proteins associated in vivo with botulinum neurotoxin (BoNT), polymerase chain reaction (PCR) experiments were carried out with oligonucleotide primers designed to regions of the nontoxic-nonhemagglutinin (NTNH) gene of Clostridium botulinum type C. The primers were used to amplify a DNA fragment from genomic DNA of C. botulinum types A, B, E, F, G and toxigenic strains of Clostridium barati and Clostridium butyricum. The amplified product from all of these strains hybridized with an internal oligonucleotide probe, whereas all nontoxigenic clostridia tested gave no PCR product and showed no reaction with the probe. The NTNH gene was shown to be located upstream of the gene encoding BoNT, thereby revealing a conserved structure for genes encoding the proteins of the M complex of the progenitor botulinum toxin in these organisms. The sequence of the NTNH gene of nonproteolytic C. botulinum type F was determined by PCR amplification and sequencing of overlapping cloned fragments. NTNH/F showed 71% and 61% identity with NTNH of C. botulinum type E and type C respectively.
    MeSH term(s) Amino Acid Sequence ; Bacterial Proteins/chemistry ; Bacterial Proteins/genetics ; Base Sequence ; Botulinum Toxins/chemistry ; Botulinum Toxins/genetics ; Clostridium botulinum/genetics ; Conserved Sequence ; DNA, Bacterial ; Genes, Bacterial ; Molecular Sequence Data ; Neurotoxins/chemistry ; Neurotoxins/genetics ; Polymerase Chain Reaction ; Sequence Homology, Amino Acid
    Chemical Substances Bacterial Proteins ; Clostridium botulinum M toxin ; DNA, Bacterial ; NTNH protein, Clostridium botulinum ; Neurotoxins ; Botulinum Toxins (EC 3.4.24.69)
    Language English
    Publishing date 1994-08
    Publishing country United States
    Document type Journal Article
    ZDB-ID 134238-1
    ISSN 1432-0991 ; 0343-8651
    ISSN (online) 1432-0991
    ISSN 0343-8651
    DOI 10.1007/bf01575751
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article: F.R.M.P. (Florida Regional Medical Program).

    Collins, C M

    The Journal of the Florida Medical Association

    1971  Volume 58, Issue 2, Page(s) 44–46

    MeSH term(s) Florida ; Regional Medical Programs
    Language English
    Publishing date 1971-02
    Publishing country United States
    Document type Journal Article
    ZDB-ID 422686-0
    ISSN 0015-4148 ; 0093-0970
    ISSN 0015-4148 ; 0093-0970
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Conserved structure of genes encoding components of botulinum neurotoxin complex M and the sequence of the gene coding for the nontoxic component in nonproteolytic Clostridium botulinum type F

    East, A.K / Collins, M.D

    Current microbiology. Aug 1994. v. 29 (2)

    1994  

    Abstract: ... a DNA fragment from genomic DNA of C. botulinum types A, B, E, F, G and toxigenic strains of Clostridium ... thereby revealing a conserved structure for genes encoding the proteins of the M complex of the progenitor ... botulinum toxin in these organisms. The sequence of the NTNH gene of nonproteolytic C. botulinum type F was ...

    Abstract For investigation of the genes of proteins associated in vivo with botulinum neurotoxin (BoNT), polymerase chain reaction (PCR) experiments were carried out with oligonucleotide primers designed to regions of the nontoxic-nonhemagglutinin (NTNH) gene of Clostridium botulinum type C. The primers were used to amplify a DNA fragment from genomic DNA of C. botulinum types A, B, E, F, G and toxigenic strains of Clostridium barati and Clostridium butyricum. The amplified product from all of these strains hybridized with an internal oligonucleotide probe, whereas all nontoxigenic clostridia tested gave no PCR product and showed no reaction with the probe. The NTNH gene was shown to be located upstream of the gene encoding BoNT, thereby revealing a conserved structure for genes encoding the proteins of the M complex of the progenitor botulinum toxin in these organisms. The sequence of the NTNH gene of nonproteolytic C. botulinum type F was determined by PCR amplification and sequencing of overlapping cloned fragments. NTNH/F showed 71% and 61% identity with NTNH of C. botulinum type E and type C respectively.
    Keywords Clostridium botulinum ; neurotoxins ; genes ; DNA ; nucleotide sequences ; amino acid sequences ; genetic code ; sequence alignment
    Language English
    Dates of publication 1994-08
    Size p. 69-77.
    Document type Article
    ZDB-ID 134238-1
    ISSN 1432-0991 ; 0343-8651
    ISSN (online) 1432-0991
    ISSN 0343-8651
    Database NAL-Catalogue (AGRICOLA)

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  5. Article ; Online: Neuroplasticity, the Prefrontal Cortex, and Psychopathology-Related Deviations in Cognitive Control.

    Luciana, Monica / Collins, Paul F

    Annual review of clinical psychology

    2022  Volume 18, Page(s) 443–469

    Abstract: A basic survival need is the ability to respond to, and persevere in the midst of, experiential challenges. Mechanisms of neuroplasticity permit this responsivity via functional adaptations (flexibility), as well as more substantial structural ... ...

    Abstract A basic survival need is the ability to respond to, and persevere in the midst of, experiential challenges. Mechanisms of neuroplasticity permit this responsivity via functional adaptations (flexibility), as well as more substantial structural modifications following chronic stress or injury. This review focuses on prefrontally based flexibility, expressed throughout large-scale neuronal networks through the actions of excitatory and inhibitory neurotransmitters and neuromodulators. With substance use disorders and stress-related internalizing disorders as exemplars, we review human behavioral and neuroimaging data, considering whether executive control, particularly cognitive flexibility, is impaired premorbidly, enduringly compromised with illness progression, or both. We conclude that deviations in control processes are consistently expressed in the context of active illness but operate through different mechanisms and with distinct longitudinal patterns in externalizing versus internalizing conditions.
    MeSH term(s) Cognition ; Humans ; Neuronal Plasticity ; Prefrontal Cortex ; Psychopathology ; Substance-Related Disorders
    Language English
    Publishing date 2022-05-06
    Publishing country United States
    Document type Journal Article ; Review ; Research Support, N.I.H., Extramural
    ZDB-ID 2194815-X
    ISSN 1548-5951 ; 1548-5943
    ISSN (online) 1548-5951
    ISSN 1548-5943
    DOI 10.1146/annurev-clinpsy-081219-111203
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Analysis of a neutron-induced conversion electron spectrum of gadolinium.

    Pommé, S / Veale, M C / Pooley, D E / Van Assche, F / Falksohn, F / Collins, S M

    Applied radiation and isotopes : including data, instrumentation and methods for use in agriculture, industry and medicine

    2023  Volume 197, Page(s) 110828

    Abstract: A 100-nm-thick gadolinium layer deposited on a pixelated silicon sensor was activated in a neutron field to measure the internal conversion electron (ICE) spectrum generated by neutron capture products ... ...

    Abstract A 100-nm-thick gadolinium layer deposited on a pixelated silicon sensor was activated in a neutron field to measure the internal conversion electron (ICE) spectrum generated by neutron capture products of
    Language English
    Publishing date 2023-04-20
    Publishing country England
    Document type Journal Article
    ZDB-ID 1142596-9
    ISSN 1872-9800 ; 0883-2889 ; 0969-8043
    ISSN (online) 1872-9800
    ISSN 0883-2889 ; 0969-8043
    DOI 10.1016/j.apradiso.2023.110828
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: An inducible explant model of osteoclast-osteoprogenitor coordination in exacerbated osteoclastogenesis.

    Whitlock, Jarred M / de Castro, Luis F / Collins, Michael T / Chernomordik, Leonid V / Boyce, Alison M

    iScience

    2023  Volume 26, Issue 4, Page(s) 106470

    Abstract: Elucidating a basic blueprint of osteoclast-osteoblast coordination in skeletal remodeling and understanding how this coordination breaks down with age and disease is essential for addressing the growing skeletal health problem in our aging population. ... ...

    Abstract Elucidating a basic blueprint of osteoclast-osteoblast coordination in skeletal remodeling and understanding how this coordination breaks down with age and disease is essential for addressing the growing skeletal health problem in our aging population. The paucity of simple, activatable, biologically relevant models of osteoclast-osteoblast coordination has hindered our understanding of how skeletal remolding is regulated. Here, we describe an inducible
    Language English
    Publishing date 2023-03-23
    Publishing country United States
    Document type Journal Article
    ISSN 2589-0042
    ISSN (online) 2589-0042
    DOI 10.1016/j.isci.2023.106470
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: Sabbatical Leave.

    Morris, Ian M / Collins, F T

    Journal of the Royal College of Physicians of London

    2019  Volume 28, Issue 5, Page(s) 486

    Language English
    Publishing date 2019-01-22
    Publishing country England
    Document type Journal Article ; Comment
    ZDB-ID 3005-3
    ISSN 0035-8819
    ISSN 0035-8819
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Oral iron therapy: Current concepts and future prospects for improving efficacy and outcomes.

    Ebea-Ugwuanyi, Pearl O / Vidyasagar, Sadasivan / Connor, James R / Frazer, David M / Knutson, Mitchell D / Collins, James F

    British journal of haematology

    2024  Volume 204, Issue 3, Page(s) 759–773

    Abstract: Iron deficiency (ID) and iron-deficiency anaemia (IDA) are global public health concerns, most commonly afflicting children, pregnant women and women of childbearing age. Pathological outcomes of ID include delayed cognitive development in children, ... ...

    Abstract Iron deficiency (ID) and iron-deficiency anaemia (IDA) are global public health concerns, most commonly afflicting children, pregnant women and women of childbearing age. Pathological outcomes of ID include delayed cognitive development in children, adverse pregnancy outcomes and decreased work capacity in adults. IDA is usually treated by oral iron supplementation, typically using iron salts (e.g. FeSO
    MeSH term(s) Adult ; Child ; Female ; Humans ; Pregnancy ; Iron/metabolism ; Anemia, Iron-Deficiency/therapy ; Iron Deficiencies ; Iron Overload/drug therapy
    Chemical Substances Iron (E1UOL152H7)
    Language English
    Publishing date 2024-01-22
    Publishing country England
    Document type Journal Article ; Review
    ZDB-ID 80077-6
    ISSN 1365-2141 ; 0007-1048
    ISSN (online) 1365-2141
    ISSN 0007-1048
    DOI 10.1111/bjh.19268
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Evaluation of ABT-751, a novel anti-mitotic agent able to overcome multi-drug resistance, in melanoma cells.

    Mahgoub, Thamir M / Jordan, Emmet J / Mahdi, Amira F / Oettl, Veronika / Huefner, Stefanie / O'Donovan, Norma / Crown, John / Collins, Denis M

    Cancer chemotherapy and pharmacology

    2024  Volume 93, Issue 5, Page(s) 427–437

    Abstract: Purpose: Drug efflux transporter associated multi-drug resistance (MDR) is a potential limitation in the use of taxane chemotherapies for the treatment of metastatic melanoma. ABT-751 is an orally bioavailable microtubule-binding agent capable of ... ...

    Abstract Purpose: Drug efflux transporter associated multi-drug resistance (MDR) is a potential limitation in the use of taxane chemotherapies for the treatment of metastatic melanoma. ABT-751 is an orally bioavailable microtubule-binding agent capable of overcoming MDR and proposed as an alternative to taxane-based therapies.
    Methods: This study compares ABT-751 to taxanes in vitro, utilizing seven melanoma cell line models, publicly available gene expression and drug sensitivity databases, a lung cancer cell line model of MDR drug efflux transporter overexpression (DLKP-A), and drug efflux transporter ATPase assays.
    Results: Melanoma cell lines exhibit a low but variable protein and RNA expression of drug efflux transporters P-gp, BCRP, and MDR3. Expression of P-gp and MDR3 correlates with sensitivity to taxanes, but not to ABT-751. The anti-proliferative IC
    Conclusion: Our study confirms that ABT-751 is active against melanoma cell lines and models of MDR at physiologically relevant concentrations, it inhibits P-gp ATPase activity, and it may be a BCRP and/or MDR3 substrate. ABT-751 warrants further investigation alone or in tandem with other drug efflux transporter inhibitors for hard-to-treat MDR melanoma.
    MeSH term(s) Humans ; Melanoma/drug therapy ; Melanoma/pathology ; Melanoma/genetics ; Melanoma/metabolism ; Drug Resistance, Neoplasm/drug effects ; Sulfonamides/pharmacology ; Cell Line, Tumor ; Drug Resistance, Multiple/drug effects ; Taxoids/pharmacology ; Cell Proliferation/drug effects ; Antimitotic Agents/pharmacology ; Antineoplastic Agents/pharmacology ; ATP Binding Cassette Transporter, Subfamily G, Member 2/genetics ; ATP Binding Cassette Transporter, Subfamily G, Member 2/metabolism ; ATP Binding Cassette Transporter, Subfamily G, Member 2/antagonists & inhibitors
    Chemical Substances Sulfonamides ; ABT751 ; Taxoids ; Antimitotic Agents ; Antineoplastic Agents ; ATP Binding Cassette Transporter, Subfamily G, Member 2
    Language English
    Publishing date 2024-01-16
    Publishing country Germany
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 6820-2
    ISSN 1432-0843 ; 0344-5704 ; 0943-9404
    ISSN (online) 1432-0843
    ISSN 0344-5704 ; 0943-9404
    DOI 10.1007/s00280-023-04624-6
    Database MEDical Literature Analysis and Retrieval System OnLINE

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