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  1. Artikel ; Online: Microbial and Chemical Profiles of Commercial Kombucha Products.

    Yang, Jieping / Lagishetty, Venu / Kurnia, Patrick / Henning, Susanne M / Ahdoot, Aaron I / Jacobs, Jonathan P

    Nutrients

    2022  Band 14, Heft 3

    Abstract: Kombucha is an increasingly popular functional beverage that has gained attention for its unique combination of phytochemicals, metabolites, and microbes. Previous chemical and microbial composition analyses of kombucha have mainly focused on ... ...

    Abstract Kombucha is an increasingly popular functional beverage that has gained attention for its unique combination of phytochemicals, metabolites, and microbes. Previous chemical and microbial composition analyses of kombucha have mainly focused on understanding their changes during fermentation. Very limited information is available regarding nutrient profiles of final kombucha products in the market. In this study, we compared the major chemicals (tea polyphenols, caffeine), antioxidant properties, microbial and metabolomic profiles of nine commercial kombucha products using shotgun metagenomics, internal transcribed spacer sequencing, untargeted metabolomics, and targeted chemical assays. All of the nine kombucha products showed similar acidity but great differences in chemicals, metabolites, microbes, and antioxidant activities. Most kombucha products are dominated by the probiotic
    Mesh-Begriff(e) Bacteria/metabolism ; Beverages/analysis ; Fermentation ; Polyphenols/analysis ; Yeasts/metabolism
    Chemische Substanzen Polyphenols
    Sprache Englisch
    Erscheinungsdatum 2022-02-05
    Erscheinungsland Switzerland
    Dokumenttyp Journal Article
    ZDB-ID 2518386-2
    ISSN 2072-6643 ; 2072-6643
    ISSN (online) 2072-6643
    ISSN 2072-6643
    DOI 10.3390/nu14030670
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  2. Artikel: Microbial and Chemical Profiles of Commercial Kombucha Products

    Yang, Jieping / Lagishetty, Venu / Kurnia, Patrick / Henning, Susanne M. / Ahdoot, Aaron I. / Jacobs, Jonathan P.

    Nutrients. 2022 Feb. 05, v. 14, no. 3

    2022  

    Abstract: Kombucha is an increasingly popular functional beverage that has gained attention for its unique combination of phytochemicals, metabolites, and microbes. Previous chemical and microbial composition analyses of kombucha have mainly focused on ... ...

    Abstract Kombucha is an increasingly popular functional beverage that has gained attention for its unique combination of phytochemicals, metabolites, and microbes. Previous chemical and microbial composition analyses of kombucha have mainly focused on understanding their changes during fermentation. Very limited information is available regarding nutrient profiles of final kombucha products in the market. In this study, we compared the major chemicals (tea polyphenols, caffeine), antioxidant properties, microbial and metabolomic profiles of nine commercial kombucha products using shotgun metagenomics, internal transcribed spacer sequencing, untargeted metabolomics, and targeted chemical assays. All of the nine kombucha products showed similar acidity but great differences in chemicals, metabolites, microbes, and antioxidant activities. Most kombucha products are dominated by the probiotic Bacillus coagulans or bacteria capable of fermentation including Lactobacillus nagelii, Gluconacetobacter, Gluconobacter, and Komagataeibacter species. We found that all nine kombuchas also contained varying levels of enteric bacteria including Bacteroides thetaiotamicron, Escherischia coli, Enterococcus faecalis, Bacteroides fragilis, Enterobacter cloacae complex, and Akkermansia muciniphila. The fungal composition of kombucha products was characterized by predominance of fermenting yeast including Brettanomyces species and Cyberlindnera jadinii. Kombucha varied widely in chemical content assessed by global untargeted metabolomics, with metabolomic variation being significantly associated with metagenomic profiles. Variation in tea bases, bacteria/yeast starter cultures, and duration of fermentation may all contribute to the observed large differences in the microbial and chemical profiles of final kombucha products.
    Schlagwörter Bacillus coagulans ; Bacteroides fragilis ; Cyberlindnera ; Enterobacter cloacae ; Enterococcus faecalis ; Escherichia coli ; Gluconacetobacter ; Gluconobacter ; Lactobacillus nagelii ; acidity ; antioxidants ; caffeine ; fermentation ; internal transcribed spacers ; kombucha ; markets ; metabolites ; metabolomics ; metagenomics ; phytochemicals ; polyphenols ; probiotics ; tea ; yeasts
    Sprache Englisch
    Erscheinungsverlauf 2022-0205
    Erscheinungsort Multidisciplinary Digital Publishing Institute
    Dokumenttyp Artikel
    ZDB-ID 2518386-2
    ISSN 2072-6643
    ISSN 2072-6643
    DOI 10.3390/nu14030670
    Datenquelle NAL Katalog (AGRICOLA)

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  3. Artikel ; Online: Modification of post-traumatic epilepsy by fecal microbiota transfer.

    Medel-Matus, Jesus-Servando / Simpson, Carra A / Ahdoot, Aaron I / Shin, Don / Sankar, Raman / Jacobs, Jonathan P / Mazarati, Andrey M

    Epilepsy & behavior : E&B

    2022  Band 134, Seite(n) 108860

    Abstract: It has been well established that traumatic brain injury (TBI) modifies the composition of gut microbiome. Epilepsy, which represents one of the common sequelae of TBI, has been associated with dysbiosis. Earlier study showed that the risk of post- ... ...

    Abstract It has been well established that traumatic brain injury (TBI) modifies the composition of gut microbiome. Epilepsy, which represents one of the common sequelae of TBI, has been associated with dysbiosis. Earlier study showed that the risk of post-traumatic epilepsy (PTE) after lateral fluid percussion injury (LFPI) in rats can be stratified based on pre-existing (i.e., pre-TBI) gut microbiome profile. In the present study, we examined whether fecal microbiota transfer (FMT) from naïve rats with different prospective histories of PTE would affect the trajectory of PTE in recipients. Fecal samples were collected from naïve adult male Sprague-Dawley rats, followed by LFPI. Seven months later, upon four weeks of vide-EEG monitoring (vEEG), the rats were categorized as those with and without PTE. Recipients were subjected to LFPI, followed by FMT from donors with and without impending PTE. Control groups included auto-FMT and no-FMT subjects. Seven month after LFPI, recipients underwent four-week vEEG to detect spontaneous seizures. After completing vEEG, rats of all groups underwent kindling of basolateral amygdala. Fecal microbiota transfer from donors with impending PTE exerted mild-to-moderate pro-epileptic effects in recipients, evident as marginal increase in multiple spontaneous seizure incidence, and facilitation of kindling. Analysis of fecal samples in selected recipients and their respective donors confirmed that FMT modified microbiota in recipients along the donors' lines, albeit without full microbiome conversion. The findings provide further evidence that gut microbiome may actively modulate the susceptibility to epilepsy.
    Mesh-Begriff(e) Animals ; Brain Injuries, Traumatic ; Epilepsy ; Epilepsy, Post-Traumatic ; Fecal Microbiota Transplantation ; Humans ; Male ; Prospective Studies ; Rats ; Rats, Sprague-Dawley ; Seizures
    Sprache Englisch
    Erscheinungsdatum 2022-07-29
    Erscheinungsland United States
    Dokumenttyp Journal Article ; Research Support, U.S. Gov't, Non-P.H.S.
    ZDB-ID 2010587-3
    ISSN 1525-5069 ; 1525-5050
    ISSN (online) 1525-5069
    ISSN 1525-5050
    DOI 10.1016/j.yebeh.2022.108860
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  4. Artikel ; Online: Microbial and Metabolite Signatures of Stress Reactivity in Ulcerative Colitis Patients in Clinical Remission Predict Clinical Flare Risk.

    Jacobs, Jonathan P / Sauk, Jenny S / Ahdoot, Aaron I / Liang, Fengting / Katzka, William / Ryu, Hyo Jin / Khandadash, Ariela / Lagishetty, Venu / Labus, Jennifer S / Naliboff, Bruce D / Mayer, Emeran A

    Inflammatory bowel diseases

    2023  Band 30, Heft 3, Seite(n) 336–346

    Abstract: Background: Stress reactivity (SR) is associated with increased risk of flares in ulcerative colitis (UC) patients. Because both preclinical and clinical data support that stress can influence gut microbiome composition and function, we investigated ... ...

    Abstract Background: Stress reactivity (SR) is associated with increased risk of flares in ulcerative colitis (UC) patients. Because both preclinical and clinical data support that stress can influence gut microbiome composition and function, we investigated whether microbiome profiles of SR exist in UC.
    Methods: Ninety-one UC subjects in clinical and biochemical remission were classified into high and low SR groups by questionnaires. Baseline and longitudinal characterization of the intestinal microbiome was performed by 16S rRNA gene sequencing and fecal and plasma global untargeted metabolomics. Microbe, fecal metabolite, and plasma metabolite abundances were analyzed separately to create random forest classifiers for high SR and biomarker-derived SR scores.
    Results: High SR reactivity was characterized by altered abundance of fecal microbes, primarily in the Ruminococcaceae and Lachnospiraceae families; fecal metabolites including reduced levels of monoacylglycerols (endocannabinoid-related) and bile acids; and plasma metabolites including increased 4-ethyl phenyl sulfate, 1-arachidonoylglycerol (endocannabinoid), and sphingomyelin. Classifiers generated from baseline microbe, fecal metabolite, and plasma metabolite abundance distinguished high vs low SR with area under the receiver operating characteristic curve of 0.81, 0.83, and 0.91, respectively. Stress reactivity scores derived from these classifiers were significantly associated with flare risk during 6 to 24 months of follow-up, with odds ratios of 3.8, 4.1, and 4.9. Clinical flare and intestinal inflammation did not alter fecal microbial abundances but attenuated fecal and plasma metabolite differences between high and low SR.
    Conclusions: High SR in UC is characterized by microbial signatures that predict clinical flare risk, suggesting that the microbiome may contribute to stress-induced UC flares.
    Mesh-Begriff(e) Humans ; Colitis, Ulcerative ; Endocannabinoids ; RNA, Ribosomal, 16S ; Bile Acids and Salts ; Clostridiales
    Chemische Substanzen Endocannabinoids ; RNA, Ribosomal, 16S ; Bile Acids and Salts
    Sprache Englisch
    Erscheinungsdatum 2023-08-30
    Erscheinungsland England
    Dokumenttyp Journal Article
    ZDB-ID 1340971-2
    ISSN 1536-4844 ; 1078-0998
    ISSN (online) 1536-4844
    ISSN 1078-0998
    DOI 10.1093/ibd/izad185
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  5. Artikel: Gut microbiome profiles associated with steatosis severity in metabolic associated fatty liver disease.

    Dong, Tien S / Luu, Kayti / Lagishetty, Venu / Sedighian, Farzaneh / Woo, Shih-Lung / Dreskin, Benjamin W / Katzka, William / Chang, Candace / Zhou, Yi / Arias-Jayo, Nerea / Yang, Julianne / Ahdoot, Aaron I / Ye, Jason / Li, Zhaoping / Pisegna, Joseph R / Jacobs, Jonathan P

    Hepatoma research

    2023  Band 7, Heft 37

    Abstract: Aim: The microbiome has been shown to be pivotal in the development of metabolic associated fatty liver disease (MAFLD). Few have examined the relationship of the microbiome specifically with steatosis grade. Therefore, our aim was to characterize the ... ...

    Abstract Aim: The microbiome has been shown to be pivotal in the development of metabolic associated fatty liver disease (MAFLD). Few have examined the relationship of the microbiome specifically with steatosis grade. Therefore, our aim was to characterize the association of the microbiome with MAFLD steatosis severity while adjusting for metabolic comorbidities including diabetes.
    Methods: We enrolled patients with MAFLD at the West Los Angeles Veterans Affair Hospital. All patients underwent ultrasound elastography, fasting serum collection, and fecal sampling for 16S sequencing. We examined the associations of microbial diversity and composition with advanced steatosis, defined as a CAP score of ≥ 300 dB/m, with or without the presence of metabolic comorbidities.
    Results: Seventy-five patients were enrolled. African American were less likely to have advanced steatosis than either Hispanics or Whites (
    Conclusion: Diabetes and metabolic syndrome are associated with hepatic steatosis severity in MAFLD patients and both advanced steatosis and comorbid diabetes are independently associated with microbiome changes. These results provide insight into the role of the gut microbiome in MAFLD associated with metabolic syndrome.
    Sprache Englisch
    Erscheinungsdatum 2023-01-10
    Erscheinungsland United States
    Dokumenttyp Journal Article
    ZDB-ID 2819886-4
    ISSN 2394-5079
    ISSN 2394-5079
    DOI 10.20517/2394-5079.2021.55
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  6. Artikel ; Online: High Perceived Stress is Associated With Increased Risk of Ulcerative Colitis Clinical Flares.

    Sauk, Jenny S / Ryu, Hyo Jin / Labus, Jennifer S / Khandadash, Ariela / Ahdoot, Aaron I / Lagishetty, Venu / Katzka, William / Wang, Hao / Naliboff, Bruce / Jacobs, Jonathan P / Mayer, Emeran A

    Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association

    2022  Band 21, Heft 3, Seite(n) 741–749.e3

    Abstract: Background & aims: Although perceived stress (PS) has been associated with symptomatic flares in inflammatory bowel disease, clinical and physiological measures associated with perceived stress and flare are not known. The aim of this study was to ... ...

    Abstract Background & aims: Although perceived stress (PS) has been associated with symptomatic flares in inflammatory bowel disease, clinical and physiological measures associated with perceived stress and flare are not known. The aim of this study was to identify physiological factors associated with perceived stress in ulcerative colitis (UC) subjects, and their relationship with flare.
    Methods: Patients with UC in clinical remission (Simple Colitis Clinical Activity Index [SCCAI] score <5) underwent clinical and behavioral assessments, morning salivary cortisol measurements, autonomic nervous system activity testing (heart rate variability, electrodermal activity) at baseline with patient-reported SCCAI every 2 weeks over 1 to 2 years and fecal calprotectin at time of flare. Clinical flares (SCCAI ≥5) and biochemical flares (SCCAI ≥5 with fecal calprotectin ≥250 μg/g) were evaluated.
    Results: One hundred ten patients with UC were enrolled, with mean follow-up of 65.6 weeks. Patients with UC with higher and lower PS were determined. Although the high PS group had 3.6 times higher odds of a clinical flare than the low PS group, no significant differences in biochemical flares were observed between the low and high PS groups. The high vs low PS group differed in tonic sympathetic arousal as indexed by significantly greater baseline electrodermal activity (4.3 vs 3.4 microsiemens; P = .026) in the high PS group, but not in terms of heart rate variability and morning cortisol levels. Increased fecal calprotectin was associated with cardioautonomic measures, suggesting lower parasympathetic activity.
    Conclusions: Increased PS assessed at baseline is associated with tonic sympathetic arousal and greater odds of clinical flares in patients with UC.
    Mesh-Begriff(e) Humans ; Colitis, Ulcerative/physiopathology ; Colitis, Ulcerative/psychology ; Feces/chemistry ; Hydrocortisone ; Inflammatory Bowel Diseases/physiopathology ; Inflammatory Bowel Diseases/psychology ; Leukocyte L1 Antigen Complex ; Stress, Psychological/physiopathology ; Symptom Flare Up
    Chemische Substanzen Hydrocortisone (WI4X0X7BPJ) ; Leukocyte L1 Antigen Complex
    Sprache Englisch
    Erscheinungsdatum 2022-08-08
    Erscheinungsland United States
    Dokumenttyp Journal Article
    ZDB-ID 2119789-1
    ISSN 1542-7714 ; 1542-3565
    ISSN (online) 1542-7714
    ISSN 1542-3565
    DOI 10.1016/j.cgh.2022.07.025
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  7. Artikel: The Intestinal Microbiome Predicts Weight Loss on a Calorie-Restricted Diet and Is Associated With Improved Hepatic Steatosis.

    Dong, Tien S / Luu, Kayti / Lagishetty, Venu / Sedighian, Farzaneh / Woo, Shih-Lung / Dreskin, Benjamin W / Katzka, William / Chang, Candace / Zhou, Yi / Arias-Jayo, Nerea / Yang, Julianne / Ahdoot, Aaron I / Ye, Jason / Li, Zhaoping / Pisegna, Joseph R / Jacobs, Jonathan P

    Frontiers in nutrition

    2021  Band 8, Seite(n) 718661

    Abstract: Background: ...

    Abstract Background:
    Sprache Englisch
    Erscheinungsdatum 2021-07-08
    Erscheinungsland Switzerland
    Dokumenttyp Journal Article
    ZDB-ID 2776676-7
    ISSN 2296-861X
    ISSN 2296-861X
    DOI 10.3389/fnut.2021.718661
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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