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  1. Book ; Online: Oceanography and Marine Biology

    Hawkins, S. J / Todd, P. A / Russell, B. D / Lemasson, A. J / Allcock, A. L / Byrne, M / Firth, L. B / Lucas, C. H / Marzinelli, E. M / Mumby, P. J / Sharples, J / Smith, I. P / Swearer, S. E

    An annual review. Volume 61

    2023  

    Keywords Applied ecology ; The Earth: natural history general ; Oceanography (seas) ; Environmental science, engineering & technology ; Climate change ; Marine biology ; oceanography ; marine biology ; marine science ; environmental science ; fisheries ; fish biology ; crustaceans ; climate change
    Language English
    Size 1 electronic resource (376 pages)
    Publisher Taylor and Francis
    Publishing place Boca Raton, Abingdon
    Document type Book ; Online
    Note English
    HBZ-ID HT030612922
    ISBN 9781003363873 ; 1003363873
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  2. Book ; Online: Oceanography and Marine Biology : An Annual Review, Volume 58

    Hawkins, S. J. / Allcock, A. L. / Bates, A. E. / Evans, A.J. / Firth, L. B. / McQuaid, C. D. / Russell, B. D. / Smith, I. P. / Swearer, S. E. / Todd, P. A.

    2020  

    Keywords Marine biology ; Oceanography (seas) ; Environmental science, engineering & technology ; Climate change ; Biodiversity ; Zoology: Invertebrates ; Volume, Todd, Swearer, Smith, S, Russell, Review, P, OMBAR, Oceanography, Marine, L, I, Hawkins, Firth, Evans, Biology, Bates,B, Annual, Allcock
    Size 1 Online-Ressource
    Publisher Taylor and Francis
    Document type Book ; Online
    Note English ; Open Access
    HBZ-ID HT021028088
    ISBN 9780367524722 ; 0367524724
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  3. Book ; Online: Oceanography and Marine Biology : An Annual Review, Volume 59

    Hawkins, S.J. / Lemasson, A. J. / Allcock, A.L. / Bates, A. E. / Byrne, M. / Evans, A J. / Firth, L.B. / Marzinelli, E.M. / Russell, B.D. / Smith, I.P. / Swearer, S.E. / Todd, P.A.

    2021  

    Keywords Lifestyle, sport & leisure ; Earth sciences, geography, environment, planning ; Technology, engineering, agriculture ; Mathematics & science ; oceanography, climate change, reefs, marine science, marine conservation, marine research
    Size 1 Online-Ressource
    Publisher Taylor and Francis
    Document type Book ; Online
    Note English ; Open Access
    HBZ-ID HT021290418
    ISBN 9781003138846 ; 1003138845
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  4. Book ; Online: Oceanography and Marine Biology : An Annual Review

    Hawkins, S. J. / Allcock, A. L. / Bates, A. E. / Firth, L. B. / Smith, I. P. / Swearer, S. E. / Todd, P. A.

    2019  

    Keywords Earth sciences, geography, environment, planning ; oceanography ; marine biology ; marine science ; global environment
    Size 1 electronic resource (434 pages)
    Publisher Taylor and Francis
    Document type Book ; Online
    Note English ; Open Access
    HBZ-ID HT021028355
    ISBN 9780429026379 ; 0429026374
    Database ZB MED Catalogue: Medicine, Health, Nutrition, Environment, Agriculture

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  5. Article: DNA barcoding reveals unexpected diversity of deep-sea octopuses in the North-east Atlantic

    Taire, M. / Dillon, L. / Strugnell, J. M. / Drewery, J. / Allcock, A. L.

    Biology and environment

    2023  Volume 1, Issue 1, Page(s) 1

    Language English
    Document type Article
    ZDB-ID 1169496-8
    ISSN 0791-7945
    Database Current Contents Nutrition, Environment, Agriculture

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  6. Article: DNA barcoding reveals unexpected diversity of deep-sea octopuses in the North-east Atlantic

    Taite, M. / Dillon, L. / Strugnell, J.M. / Drewery, J. / Allcock, A.L.

    Biology and environment

    2023  Volume -, Issue 1, Page(s) 1

    Language English
    Document type Article
    ZDB-ID 1169496-8
    ISSN 0791-7945
    Database Current Contents Nutrition, Environment, Agriculture

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  7. Article ; Online: Genome skimming elucidates the evolutionary history of Octopoda.

    Taite, M / Fernández-Álvarez, F Á / Braid, H E / Bush, S L / Bolstad, K / Drewery, J / Mills, S / Strugnell, J M / Vecchione, M / Villanueva, R / Voight, J R / Allcock, A L

    Molecular phylogenetics and evolution

    2023  Volume 182, Page(s) 107729

    Abstract: Phylogenies for Octopoda have, until now, been based on morphological characters or a few genes. Here we provide the complete mitogenomes and the nuclear 18S and 28S ribosomal genes of twenty Octopoda specimens, comprising 18 species of Cirrata and ... ...

    Abstract Phylogenies for Octopoda have, until now, been based on morphological characters or a few genes. Here we provide the complete mitogenomes and the nuclear 18S and 28S ribosomal genes of twenty Octopoda specimens, comprising 18 species of Cirrata and Incirrata, representing 13 genera and all five putative families of Cirrata (Cirroctopodidae, Cirroteuthidae, Grimpoteuthidae, Opisthoteuthidae and Stauroteuthidae) and six families of Incirrata (Amphitretidae, Argonautidae, Bathypolypodidae, Eledonidae, Enteroctopodidae, and Megaleledonidae) which were assembled using genome skimming. Phylogenetic trees were built using Maximum Likelihood and Bayesian Inference with several alignment matrices. All mitochondrial genomes had the 'typical' genome composition and gene order previously reported for octopodiforms, except Bathypolypus ergasticus, which appears to lack ND5, two tRNA genes that flank ND5 and two other tRNA genes. Argonautoidea was revealed as sister to Octopodidae by the mitochondrial protein-coding gene dataset, however, it was recovered as sister to all other incirrate octopods with strong support in an analysis using nuclear rRNA genes. Within Cirrata, our study supports two existing classifications suggesting neither is likely in conflict with the true evolutionary history of the suborder. Genome skimming is useful in the analysis of phylogenetic relationships within Octopoda; inclusion of both mitochondrial and nuclear data may be key.
    MeSH term(s) Animals ; Octopodiformes/genetics ; Phylogeny ; Bayes Theorem ; Mitochondria/genetics ; Genome, Mitochondrial ; RNA, Transfer
    Chemical Substances RNA, Transfer (9014-25-9)
    Language English
    Publishing date 2023-02-10
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 33610-5
    ISSN 1095-9513 ; 1055-7903
    ISSN (online) 1095-9513
    ISSN 1055-7903
    DOI 10.1016/j.ympev.2023.107729
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Genome skimming elucidates the evolutionary history of Octopoda

    Taite, M. / Fernández-Álvarez, F.Á / Braid, H.E. / Bush, S.L. / Bolstad, K. / Drewery, J. / Mills, S. / Strugnell, J.M. / Vecchione, M. / Villanueva, R. / Voight, J.R. / Allcock, A.L.

    Molecular Phylogenetics and Evolution. 2023 May, v. 182 p.107729-

    2023  

    Abstract: Phylogenies for Octopoda have, until now, been based on morphological characters or a few genes. Here we provide the complete mitogenomes and the nuclear 18S and 28S ribosomal genes of twenty Octopoda specimens, comprising 18 species of Cirrata and ... ...

    Abstract Phylogenies for Octopoda have, until now, been based on morphological characters or a few genes. Here we provide the complete mitogenomes and the nuclear 18S and 28S ribosomal genes of twenty Octopoda specimens, comprising 18 species of Cirrata and Incirrata, representing 13 genera and all five putative families of Cirrata (Cirroctopodidae, Cirroteuthidae, Grimpoteuthidae, Opisthoteuthidae and Stauroteuthidae) and six families of Incirrata (Amphitretidae, Argonautidae, Bathypolypodidae, Eledonidae, Enteroctopodidae, and Megaleledonidae) which were assembled using genome skimming. Phylogenetic trees were built using Maximum Likelihood and Bayesian Inference with several alignment matrices. All mitochondrial genomes had the 'typical' genome composition and gene order previously reported for octopodiforms, except Bathypolypus ergasticus, which appears to lack ND5, two tRNA genes that flank ND5 and two other tRNA genes. Argonautoidea was revealed as sister to Octopodidae by the mitochondrial protein-coding gene dataset, however, it was recovered as sister to all other incirrate octopods with strong support in an analysis using nuclear rRNA genes. Within Cirrata, our study supports two existing classifications suggesting neither is likely in conflict with the true evolutionary history of the suborder. Genome skimming is useful in the analysis of phylogenetic relationships within Octopoda; inclusion of both mitochondrial and nuclear data may be key.
    Keywords Bayesian theory ; Octopodidae ; data collection ; gene order ; genes ; mitochondria ; mitochondrial genome ; phylogeny ; statistical analysis ; Cephalopoda ; Mollusca ; Phylogenomics ; Systematics ; Evolution
    Language English
    Dates of publication 2023-05
    Publishing place Elsevier Inc.
    Document type Article ; Online
    Note Pre-press version ; Use and reproduction
    ZDB-ID 33610-5
    ISSN 1095-9513 ; 1055-7903
    ISSN (online) 1095-9513
    ISSN 1055-7903
    DOI 10.1016/j.ympev.2023.107729
    Database NAL-Catalogue (AGRICOLA)

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  9. Article ; Online ; Research data: (with research data) Persistent genetic signatures of historic climatic events in an Antarctic octopus.

    Strugnell, J M / Watts, P C / Smith, P J / Allcock, A L

    Molecular ecology

    2012  Volume 21, Issue 11, Page(s) 2775–2787

    Abstract: Repeated cycles of glaciation have had major impacts on the distribution of genetic diversity of the Antarctic marine fauna. During glacial periods, ice cover limited the amount of benthic habitat on the continental shelf. Conversely, more habitat and ... ...

    Abstract Repeated cycles of glaciation have had major impacts on the distribution of genetic diversity of the Antarctic marine fauna. During glacial periods, ice cover limited the amount of benthic habitat on the continental shelf. Conversely, more habitat and possibly altered seaways were available during interglacials when the ice receded and the sea level was higher. We used microsatellites and partial sequences of the mitochondrial cytochrome oxidase 1 gene to examine genetic structure in the direct-developing, endemic Southern Ocean octopod Pareledone turqueti sampled from a broad range of areas that circumvent Antarctica. We find that, unusually for a species with poor dispersal potential, P. turqueti has a circumpolar distribution and is also found off the islands of South Georgia and Shag Rocks. The overriding pattern of spatial genetic structure can be explained by hydrographic (with ocean currents both facilitating and hindering gene flow) and bathymetric features. The Antarctic Peninsula region displays a complex population structure, consistent with its varied topographic and oceanographic influences. Genetic similarities between the Ross and Weddell Seas, however, are interpreted as a persistent historic genetic signature of connectivity during the hypothesized Pleistocene West Antarctic Ice Sheet collapses. A calibrated molecular clock indicates two major lineages within P. turqueti, a continental lineage and a sub-Antarctic lineage, that diverged in the mid-Pliocene with no subsequent gene flow. Both lineages survived subsequent major glacial cycles. Our data are indicative of potential refugia at Shag Rocks and South Georgia and also around the Antarctic continent within the Ross Sea, Weddell Sea and off Adélie Land. The mean age of mtDNA diversity within these main continental lineages coincides with Pleistocene glacial cycles.
    MeSH term(s) Animals ; Antarctic Regions ; DNA, Mitochondrial ; Ecosystem ; Electron Transport Complex IV/genetics ; Evolution, Molecular ; Gene Flow ; Genetic Variation ; Genetics, Population ; Ice Cover ; Microsatellite Repeats ; Molecular Sequence Data ; Octopodiformes/genetics ; Phylogeography
    Chemical Substances DNA, Mitochondrial ; Electron Transport Complex IV (EC 1.9.3.1)
    Language English
    Publishing date 2012-06
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1126687-9
    ISSN 1365-294X ; 0962-1083 ; 0962-1083
    ISSN (online) 1365-294X
    ISSN 0962-1083
    DOI 10.1111/j.1365-294X.2012.05572.x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Book ; Online: Oceanography and Marine Biology

    Todd, P. A. / Swearer, S. E. / Smith, I. P. / Firth, L. B. / Bates, A. E. / Hawkins, S. J. / Allcock, A. L.

    2019  

    Abstract: Oceanography and Marine Biology: An Annual Review remains one of the most cited sources in marine science and oceanography. The ever increasing interest in work in oceanography and marine biology and its relevance to global environmental issues, ... ...

    Abstract Oceanography and Marine Biology: An Annual Review remains one of the most cited sources in marine science and oceanography. The ever increasing interest in work in oceanography and marine biology and its relevance to global environmental issues, especially global climate change and its impacts, creates a demand for authoritative reviews summarizing the results of recent research. This volume covers topics that include resting cysts from coastal marine plankton, facilitation cascades in marine ecosystems, and the way that human activities are rapidly altering the sensory landscape and behaviour of marine animals. For more than 50 years, OMBAR has been an essential reference for research workers and students in all fields of marine science. From Volume 57 a new international Editorial Board ensures global relevance, with editors from the UK, Ireland, Canada, Australia and Singapore. The series volumes find a place in the libraries of not only marine laboratories and institutes, but also universities.
    Keywords oceanography ; marine biology ; marine science ; global environment
    Subject code 333
    Language English
    Publisher Taylor & Francis
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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