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  1. Article ; Online: mRNA Processing Factor CstF-50 and Ubiquitin Escort Factor p97 Are BRCA1/BARD1 Cofactors Involved in Chromatin Remodeling during the DNA Damage Response.

    Fonseca, Danae / Baquero, Jorge / Murphy, Michael R / Aruggoda, Gamage / Varriano, Sophia / Sapienza, Carmen / Mashadova, Oksana / Rahman, Shadaqur / Kleiman, Frida E

    Molecular and cellular biology

    2018  Volume 38, Issue 4

    Abstract: The cellular response to DNA damage is an intricate mechanism that involves the interplay among several pathways. In this study, we provide evidence of the roles of the polyadenylation factor cleavage stimulation factor 50 (CstF-50) and the ubiquitin (Ub) ...

    Abstract The cellular response to DNA damage is an intricate mechanism that involves the interplay among several pathways. In this study, we provide evidence of the roles of the polyadenylation factor cleavage stimulation factor 50 (CstF-50) and the ubiquitin (Ub) escort factor p97 as cofactors of BRCA1/BARD1 E3 Ub ligase, facilitating chromatin remodeling during the DNA damage response (DDR). CstF-50 and p97 formed complexes with BRCA1/BARD1, Ub, and some BRCA1/BARD1 substrates, such as RNA polymerase (RNAP) II and histones. Furthermore, CstF-50 and p97 had an additive effect on the activation of the ubiquitination of these BRCA1/BARD1 substrates during DDR. Importantly, as a result of these functional interactions, BRCA1/BARD1/CstF-50/p97 had a specific effect on the chromatin structure of genes that were differentially expressed. This study provides new insights into the roles of RNA processing, BRCA1/BARD1, the Ub pathway, and chromatin structure during DDR.
    MeSH term(s) Adenosine Triphosphatases/genetics ; Adenosine Triphosphatases/metabolism ; BRCA1 Protein/genetics ; BRCA1 Protein/metabolism ; Chromatin Assembly and Disassembly ; Cleavage Stimulation Factor/genetics ; Cleavage Stimulation Factor/metabolism ; DNA Damage ; DNA Repair ; DNA-Binding Proteins/metabolism ; Histones/genetics ; Histones/metabolism ; Humans ; Nuclear Proteins/genetics ; Nuclear Proteins/metabolism ; RNA Polymerase II/genetics ; RNA Polymerase II/metabolism ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Tumor Suppressor Proteins/genetics ; Tumor Suppressor Proteins/metabolism ; Ubiquitin/metabolism ; Ubiquitin-Protein Ligases/genetics ; Ubiquitin-Protein Ligases/metabolism ; Ubiquitination ; mRNA Cleavage and Polyadenylation Factors/metabolism
    Chemical Substances BRCA1 Protein ; BRCA1 protein, human ; Cleavage Stimulation Factor ; DNA-Binding Proteins ; Histones ; Nuclear Proteins ; RNA, Messenger ; Tumor Suppressor Proteins ; Ubiquitin ; mRNA Cleavage and Polyadenylation Factors ; BARD1 protein, human (EC 2.3.2.27) ; Ubiquitin-Protein Ligases (EC 2.3.2.27) ; RNA Polymerase II (EC 2.7.7.-) ; Adenosine Triphosphatases (EC 3.6.1.-) ; p97 ATPase (EC 3.6.1.-)
    Language English
    Publishing date 2018-01-29
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 779397-2
    ISSN 1098-5549 ; 0270-7306
    ISSN (online) 1098-5549
    ISSN 0270-7306
    DOI 10.1128/MCB.00364-17
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: mRNA Processing Factor CstF-50 and Ubiquitin Escort Factor p97 Are BRCA1/BARD1 Cofactors Involved in Chromatin Remodeling during the DNA Damage Response

    Fonseca, Danae / Baquero, Jorge / Murphy, Michael R. / Aruggoda, Gamage / Varriano, Sophia / Sapienza, Carmen / Mashadova, Oksana / Rahman, Shadaqur / Kleiman, Frida E.

    Molecular and Cellular Biology. 2018 Feb. 1, v. 38, no. 4 p.e00364-17-

    2018  

    Abstract: The cellular response to DNA damage is an intricate mechanism that involves the interplay among several pathways. In this study, we provide evidence of the roles of the polyadenylation factor cleavage stimulation factor 50 (CstF-50) and the ubiquitin (Ub) ...

    Abstract The cellular response to DNA damage is an intricate mechanism that involves the interplay among several pathways. In this study, we provide evidence of the roles of the polyadenylation factor cleavage stimulation factor 50 (CstF-50) and the ubiquitin (Ub) escort factor p97 as cofactors of BRCA1/BARD1 E3 Ub ligase, facilitating chromatin remodeling during the DNA damage response (DDR). CstF-50 and p97 formed complexes with BRCA1/BARD1, Ub, and some BRCA1/BARD1 substrates, such as RNA polymerase (RNAP) II and histones. Furthermore, CstF-50 and p97 had an additive effect on the activation of the ubiquitination of these BRCA1/BARD1 substrates during DDR. Importantly, as a result of these functional interactions, BRCA1/BARD1/CstF-50/p97 had a specific effect on the chromatin structure of genes that were differentially expressed. This study provides new insights into the roles of RNA processing, BRCA1/BARD1, the Ub pathway, and chromatin structure during DDR.
    Keywords DNA damage ; DNA-directed RNA polymerase ; RNA ; additive effect ; chromatin ; histones ; ligases ; ubiquitin ; ubiquitination ; BRCA1/BARD1 ; CstF-50 ; DNA damage response ; RNA polymerase II ; chromatin remodeling ; p97
    Language English
    Dates of publication 2018-0201
    Publishing place Taylor & Francis
    Document type Article ; Online
    ZDB-ID 779397-2
    ISSN 1098-5549 ; 0270-7306
    ISSN (online) 1098-5549
    ISSN 0270-7306
    DOI 10.1128/MCB.00364-17
    Database NAL-Catalogue (AGRICOLA)

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  3. Article: Nuclear Tau, p53 and Pin1 Regulate PARN-Mediated Deadenylation and Gene Expression.

    Baquero, Jorge / Varriano, Sophia / Ordonez, Martha / Kuczaj, Pawel / Murphy, Michael R / Aruggoda, Gamage / Lundine, Devon / Morozova, Viktoriya / Makki, Ali Elhadi / Alonso, Alejandra Del C / Kleiman, Frida E

    Frontiers in molecular neuroscience

    2019  Volume 12, Page(s) 242

    Abstract: While nuclear tau plays a role in DNA damage response (DDR) and chromosome relaxation, the mechanisms behind these functions are not fully understood. Here, we show that tau forms complex(es) with factors involved in nuclear mRNA processing such as tumor ...

    Abstract While nuclear tau plays a role in DNA damage response (DDR) and chromosome relaxation, the mechanisms behind these functions are not fully understood. Here, we show that tau forms complex(es) with factors involved in nuclear mRNA processing such as tumor suppressor p53 and poly(A)-specific ribonuclease (PARN) deadenylase. Tau induces PARN activity in different cellular models during DDR, and this activation is further increased by p53 and inhibited by tau phosphorylation at residues implicated in neurological disorders. Tau's binding factor Pin1, a mitotic regulator overexpressed in cancer and depleted in Alzheimer's disease (AD), also plays a role in the activation of nuclear deadenylation. Tau, Pin1 and PARN target the expression of mRNAs deregulated in AD and/or cancer. Our findings identify novel biological roles of tau and toxic effects of hyperphosphorylated-tau. We propose a model in which factors involved in cancer and AD regulate gene expression by interactions with the mRNA processing machinery, affecting the transcriptome and suggesting insights into alternative mechanisms for the initiation and/or developments of these diseases.
    Language English
    Publishing date 2019-10-15
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2452967-9
    ISSN 1662-5099
    ISSN 1662-5099
    DOI 10.3389/fnmol.2019.00242
    Database MEDical Literature Analysis and Retrieval System OnLINE

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