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  1. Article: Genetically Engineered Extracellular Vesicles Harboring Transmembrane Scaffolds Exhibit Differences in Their Size, Expression Levels of Specific Surface Markers and Cell-Uptake.

    Zhang, Jiayi / Brown, Annie / Johnson, Brendan / Diebold, David / Asano, Kyle / Marriott, Gerard / Lu, Biao

    Pharmaceutics

    2022  Volume 14, Issue 12

    Abstract: Background: Human cell-secreted extracellular vesicles (EVs) are versatile nanomaterials suitable for disease-targeted drug delivery and therapy. Native EVs, however, usually do not interact specifically with target cells or harbor therapeutic drugs, ... ...

    Abstract Background: Human cell-secreted extracellular vesicles (EVs) are versatile nanomaterials suitable for disease-targeted drug delivery and therapy. Native EVs, however, usually do not interact specifically with target cells or harbor therapeutic drugs, which limits their potential for clinical applications. These functions can be introduced to EVs by genetic manipulation of membrane protein scaffolds, although the efficiency of these manipulations and the impacts they have on the properties of EVs are for the most part unknown. In this study, we quantify the effects of genetic manipulations of different membrane scaffolds on the physicochemical properties, molecular profiles, and cell uptake of the EVs.
    Methods: Using a combination of gene fusion, molecular imaging, and immuno-based on-chip analysis, we examined the effects of various protein scaffolds, including endogenous tetraspanins (CD9, CD63, and CD81) and exogenous vesicular stomatitis virus glycoprotein (VSVG), on the efficiency of integration in EV membranes, the physicochemical properties of EVs, and EV uptake by recipient cells.
    Results: Fluorescence imaging and live cell monitoring showed each scaffold type was integrated into EVs either in membranes of the endocytic compartment, the plasma membrane, or both. Analysis of vesicle size revealed that the incorporation of each scaffold increased the average diameter of vesicles compared to unmodified EVs. Molecular profiling of surface markers in engineered EVs using on-chip assays showed the CD63-GFP scaffold decreased expression of CD81 on the membrane surface compared to control EVs, whereas its expression was mostly unchanged in EVs bearing CD9-, CD81-, or VSVG-GFP. The results from cell uptake studies demonstrated that VSVG-engineered EVs were taken up by recipient cells to a greater degree than control EVs.
    Conclusion: We found that the incorporation of different molecular scaffolds in EVs altered their physicochemical properties, surface protein profiles, and cell-uptake functions. Scaffold-induced changes in the physical and functional properties of engineered EVs should therefore be considered in engineering EVs for the targeted delivery and uptake of therapeutics to diseased cells.
    Language English
    Publishing date 2022-11-23
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2527217-2
    ISSN 1999-4923
    ISSN 1999-4923
    DOI 10.3390/pharmaceutics14122564
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Book ; Online: ESPR (Electronic Stacking and Placement Robot)

    Rajamani, Anand / Asano, Kyle / Davis, Shawn

    Mechanical Engineering Senior Theses

    2020  

    Abstract: The agricultural industry is responsible for feeding over 7 billion humans, but even as it serves so many, companies in the agricultural sector are suffering from a labor shortage. Traina Foods is one such company that deals in the manufacturing of dried ...

    Abstract The agricultural industry is responsible for feeding over 7 billion humans, but even as it serves so many, companies in the agricultural sector are suffering from a labor shortage. Traina Foods is one such company that deals in the manufacturing of dried fruit, producing millions of pounds of fruit each year. They are, however, rapidly becoming unprofitable as the costs of labor rise. Following a visit to one of their farms, the ESPR (Electric Stacking and Placement Robot) was ideated to reduce their reliance on manual labor for the labor-intensive tasks of stacking and placing trays of fruit. In this paper, we detail the design for a robot that can manipulate several trays of fruit more safely and efficiently than a human. We created the CAD assembly for a prototype and performed analyses to ensure that performance specs could be hit reliably throughout the life cycle of the project. Testing was also performed on full-scale motors and controllers to show that control of the various actuators of the ESPR was feasible. Due to the COVID-19 epidemic, the construction of the prototype will have to be completed by a future group, and technical revisions on tray alignment will have to be tested. The robot will also have to be redesigned to incorporate autonomous navigation features and mobility. We believe that the work done this year shows that the concept of the ESPR is feasible, and further work will yield functional results in the field.
    Keywords Engineering ; Mechanical Engineering ; covid19
    Subject code 629
    Publishing date 2020-04-01T07:00:00Z
    Publisher Scholar Commons
    Publishing country us
    Document type Book ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  3. Article ; Online: Homology-independent targeted insertion (HITI) enables guided CAR knock-in and efficient clinical scale CAR-T cell manufacturing.

    Balke-Want, Hyatt / Keerthi, Vimal / Gkitsas, Nikolaos / Mancini, Andrew G / Kurgan, Gavin L / Fowler, Carley / Xu, Peng / Liu, Xikun / Asano, Kyle / Patel, Sunny / Fisher, Christopher J / Brown, Annie K / Tunuguntla, Ramya H / Patel, Shabnum / Sotillo, Elena / Mackall, Crystal L / Feldman, Steven A

    Molecular cancer

    2023  Volume 22, Issue 1, Page(s) 100

    Abstract: Background: Chimeric Antigen Receptor (CAR) T cells are now standard of care (SOC) for some patients with B cell and plasma cell malignancies and could disrupt the therapeutic landscape of solid tumors. However, access to CAR-T cells is not adequate to ... ...

    Abstract Background: Chimeric Antigen Receptor (CAR) T cells are now standard of care (SOC) for some patients with B cell and plasma cell malignancies and could disrupt the therapeutic landscape of solid tumors. However, access to CAR-T cells is not adequate to meet clinical needs, in part due to high cost and long lead times for manufacturing clinical grade virus. Non-viral site directed CAR integration can be accomplished using CRISPR/Cas9 and double-stranded DNA (dsDNA) or single-stranded DNA (ssDNA) via homology-directed repair (HDR), however yields with this approach have been limiting for clinical application (dsDNA) or access to large yields sufficient to meet the manufacturing demands outside early phase clinical trials is limited (ssDNA).
    Methods: We applied homology-independent targeted insertion (HITI) or HDR using CRISPR/Cas9 and nanoplasmid DNA to insert an anti-GD2 CAR into the T cell receptor alpha constant (TRAC) locus and compared both targeted insertion strategies in our system. Next, we optimized post-HITI CRISPR EnrichMENT (CEMENT) to seamlessly integrate it into a 14-day process and compared our knock-in with viral transduced anti-GD2 CAR-T cells. Finally, we explored the off-target genomic toxicity of our genomic engineering approach.
    Results: Here, we show that site directed CAR integration utilizing nanoplasmid DNA delivered via HITI provides high cell yields and highly functional cells. CEMENT enriched CAR T cells to approximately 80% purity, resulting in therapeutically relevant dose ranges of 5.5 × 10
    Conclusions: Our work provides a novel platform to perform guided CAR insertion into primary human T-cells using nanoplasmid DNA and holds the potential to increase access to CAR-T cell therapies.
    MeSH term(s) Humans ; T-Lymphocytes ; DNA ; Recombinational DNA Repair ; Immunotherapy, Adoptive
    Chemical Substances DNA (9007-49-2)
    Language English
    Publishing date 2023-06-26
    Publishing country England
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 2091373-4
    ISSN 1476-4598 ; 1476-4598
    ISSN (online) 1476-4598
    ISSN 1476-4598
    DOI 10.1186/s12943-023-01799-7
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Genetic labeling of extracellular vesicles for studying biogenesis and uptake in living mammalian cells.

    Levy, Daniel / Do, Mai Anh / Brown, Annie / Asano, Kyle / Diebold, David / Chen, Hanzhe / Zhang, Jiayi / Lawler, Brendan / Lu, Biao

    Methods in enzymology

    2020  Volume 645, Page(s) 1–14

    Abstract: Molecular imaging methods are powerful tools for gaining insight into the cellular organization of living cells. To understand the biogenesis and uptake of extracellular vesicles (EVs) as well as to engineer cell-derived vesicles for targeted drug ... ...

    Abstract Molecular imaging methods are powerful tools for gaining insight into the cellular organization of living cells. To understand the biogenesis and uptake of extracellular vesicles (EVs) as well as to engineer cell-derived vesicles for targeted drug delivery and therapy, genetic labeling with fluorescent proteins has increasingly been used to determine the structures, locations, and dynamics of EVs in vitro and in vivo. Here, we report a genetic method for the stable labeling of EVs to study their biogenesis and uptake in living human cells. Fusing a green fluorescent protein (GFP) with either the endogenous CD63 (CD63-GFP) or a vesicular stomatitis virus envelope glycoprotein, VSVG (VSVG-GFP), we successfully obtained distinct fluorescence signals in the cytoplasm, revealing the biogenesis of EVs in post-transfected cells. We describe experimental procedures in detail for EV isolation, imaging, and cellular uptake using both confocal microscopy and flow cytometry. We also provide a perspective on how genetic labeling methods can be used to study EV biology, characterization of engineered EVs, and development of EV-based nano-medicine.
    MeSH term(s) Animals ; Biological Transport ; Drug Delivery Systems ; Extracellular Vesicles/metabolism ; Flow Cytometry ; Green Fluorescent Proteins/genetics ; Green Fluorescent Proteins/metabolism ; Humans
    Chemical Substances Green Fluorescent Proteins (147336-22-9)
    Language English
    Publishing date 2020-02-26
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ISSN 1557-7988
    ISSN (online) 1557-7988
    DOI 10.1016/bs.mie.2020.02.001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Inosine induces stemness features in CAR-T cells and enhances potency.

    Klysz, Dorota D / Fowler, Carley / Malipatlolla, Meena / Stuani, Lucille / Freitas, Katherine A / Chen, Yiyun / Meier, Stefanie / Daniel, Bence / Sandor, Katalin / Xu, Peng / Huang, Jing / Labanieh, Louai / Keerthi, Vimal / Leruste, Amaury / Bashti, Malek / Mata-Alcazar, Janette / Gkitsas, Nikolaos / Guerrero, Justin A / Fisher, Chris /
    Patel, Sunny / Asano, Kyle / Patel, Shabnum / Davis, Kara L / Satpathy, Ansuman T / Feldman, Steven A / Sotillo, Elena / Mackall, Crystal L

    Cancer cell

    2024  Volume 42, Issue 2, Page(s) 266–282.e8

    Abstract: Adenosine (Ado) mediates immune suppression in the tumor microenvironment and exhausted ... ...

    Abstract Adenosine (Ado) mediates immune suppression in the tumor microenvironment and exhausted CD8
    MeSH term(s) Humans ; T-Lymphocytes/metabolism ; Inosine
    Chemical Substances Inosine (5A614L51CT)
    Language English
    Publishing date 2024-01-25
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2078448-X
    ISSN 1878-3686 ; 1535-6108
    ISSN (online) 1878-3686
    ISSN 1535-6108
    DOI 10.1016/j.ccell.2024.01.002
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: Inosine Induces Stemness Features in CAR T cells and Enhances Potency.

    Klysz, Dorota D / Fowler, Carley / Malipatlolla, Meena / Stuani, Lucille / Freitas, Katherine A / Meier, Stefanie / Daniel, Bence / Sandor, Katalin / Xu, Peng / Huang, Jing / Labanieh, Louai / Leruste, Amaury / Bashti, Malek / Keerthi, Vimal / Mata-Alcazar, Janette / Gkitsas, Nikolaos / Guerrero, Justin A / Fisher, Chris / Patel, Sunny /
    Asano, Kyle / Patel, Shabnum / Davis, Kara L / Satpathy, Ansuman T / Feldman, Steven A / Sotillo, Elena / Mackall, Crystal L

    bioRxiv : the preprint server for biology

    2023  

    Abstract: Adenosine (Ado) mediates immune suppression in the tumor microenvironment and exhausted ... ...

    Abstract Adenosine (Ado) mediates immune suppression in the tumor microenvironment and exhausted CD8
    Language English
    Publishing date 2023-04-25
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2023.04.21.537859
    Database MEDical Literature Analysis and Retrieval System OnLINE

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