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  1. Article ; Online: A Yersiniabactin-producing Klebsiella aerogenes Strain Causing an Outbreak in an Austrian Neonatal Intensive Care Unit.

    Baier-Grabner, Sebastian / Equiluz-Bruck, Susanne / Endress, David / Blaschitz, Marion / Schubert, Sören / Indra, Alexander / Fudel, Marta / Frischer, Thomas / Götzinger, Florian

    The Pediatric infectious disease journal

    2022  Volume 41, Issue 7, Page(s) 593–599

    Abstract: Background: Yersiniabactin, a siderophore with a high affinity to iron, has been described as a potential virulence factor in Enterobacteriaceae. Klebsiella aerogenes is a Gram-negative rod known to cause invasive infection in very low birth weight ... ...

    Abstract Background: Yersiniabactin, a siderophore with a high affinity to iron, has been described as a potential virulence factor in Enterobacteriaceae. Klebsiella aerogenes is a Gram-negative rod known to cause invasive infection in very low birth weight infants but is an unusual pathogen to cause outbreaks in neonatal intensive care units (NICU).
    Methods: We performed a retrospective analysis of all patients colonized with K. aerogenes in our NICU from September to December 2018. Each infant with an occurrence of K. aerogenes in any microbiological culture was defined as a case. Clinical data were taken from medical charts. K. aerogenes isolates were genotyped using whole-genome sequencing combined with core genome multilocus sequencing type analysis. Yersiniabactin production was evaluated by luciferase assay.
    Results: In total 16 patients were colonized with K. aerogenes over the 3-month period and 13 patients remained asymptomatic or developed late-onset neonatal sepsis from another pathogen. Three patients developed necrotizing enterocolitis, 2 complicated by sepsis and 1 of them died. All symptomatic patients were premature infants with low birth weight. Genetic sequencing confirmed an outbreak with the same strain, all samples expressed the high-pathogenicity island, necessary for the production of yersiniabactin. Six exemplary cases were proven to produce yersiniabactin in vitro.
    Conclusion: This is the first report of an outbreak of a yersiniabactin-producing K. aerogenes strain causing invasive infection in preterm infants. We hypothesize that, due to improved iron uptake, this strain was associated with higher virulence than non-yersiniabactin-producing strains. Extended search for virulence factors and genetic sequencing could be pivotal in the management of NICU outbreaks in the future.
    MeSH term(s) Austria ; Cross Infection/microbiology ; Disease Outbreaks ; Enterobacter aerogenes ; Humans ; Infant ; Infant, Newborn ; Infant, Premature ; Intensive Care Units, Neonatal ; Iron ; Klebsiella Infections/epidemiology ; Klebsiella Infections/microbiology ; Klebsiella pneumoniae/genetics ; Phenols ; Retrospective Studies ; Thiazoles ; beta-Lactamases
    Chemical Substances Phenols ; Thiazoles ; yersiniabactin ; Iron (E1UOL152H7) ; beta-Lactamases (EC 3.5.2.6)
    Language English
    Publishing date 2022-06-07
    Publishing country United States
    Document type Journal Article
    ZDB-ID 392481-6
    ISSN 1532-0987 ; 0891-3668
    ISSN (online) 1532-0987
    ISSN 0891-3668
    DOI 10.1097/INF.0000000000003553
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Evaluation of RT-qPCR of mouthwash and buccal swabs for detection of SARS-CoV-2 in children and adults.

    Laferl, Hermann / Seitz, Tamara / Baier-Grabner, Sebastian / Kelani, Hasan / Scholz, Elisabeth / Heger, Florian / Götzinger, Florian / Frischer, Prof Thomas / Wenisch, Christoph / Allerberger, Prof Franz

    American journal of infection control

    2021  Volume 50, Issue 2, Page(s) 176–181

    Abstract: Background: The use of nasopharyngeal (NP) swabs as a specimen collection method to diagnose SARS-CoV-2 infection is frequently perceived as uncomfortable by patients and requires trained personnel. In this study, detection rate of SARS-CoV-2 in ... ...

    Abstract Background: The use of nasopharyngeal (NP) swabs as a specimen collection method to diagnose SARS-CoV-2 infection is frequently perceived as uncomfortable by patients and requires trained personnel. In this study, detection rate of SARS-CoV-2 in mouthwash samples and buccal swabs were compared in both children and adults.
    Material and methods: In patients admitted to hospital with confirmed COVID-19 within the previous 72 hours, NP and buccal swabs as well as mouthwash samples were collected. RT-qPCR was performed on all samples.
    Results: In total, 170 samples were collected from 155 patients (137 adults and 18 children). Approximately 91.7% of the collected NP swabs were positive in RT-PCR compared to 63.1% of mouthwash samples and 42.4% of buccal swabs. Compared to NP swabs, the sensitivity of using mouthwash was 96.3% and 65.4% for buccal swabs in NP swab samples with a CT value <25. With increasing CT values, sensitivity decreased in both mouthwash and buccal swabs. The virus load was highest during the first week of infection, with a continuous decline observed in all three collection methods over time.
    Discussion: Mouthwash presents an alternative collection method for detecting SARS-CoV-2 in the case of unfeasible NP swab sampling. Buccal swabs should not be used due to their low sensitivity.
    MeSH term(s) Adult ; COVID-19 ; Child ; Humans ; Mouthwashes ; Nasopharynx ; SARS-CoV-2 ; Specimen Handling
    Chemical Substances Mouthwashes
    Language English
    Publishing date 2021-10-28
    Publishing country United States
    Document type Journal Article
    ZDB-ID 392362-9
    ISSN 1527-3296 ; 0196-6553
    ISSN (online) 1527-3296
    ISSN 0196-6553
    DOI 10.1016/j.ajic.2021.10.019
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Influenza and respiratory syncytial virus during the COVID-19 pandemic: Time for a new paradigm?

    Binns, Emma / Koenraads, Marianne / Hristeva, Lidia / Flamant, Alix / Baier-Grabner, Sebastian / Loi, Mervin / Lempainen, Johanna / Osterheld, Elise / Ramly, Bazlin / Chakakala-Chaziya, Jessica / Enaganthi, Niveditha / Simó Nebot, Silvia / Buonsenso, Danilo

    Pediatric pulmonology

    2021  Volume 57, Issue 1, Page(s) 38–42

    Abstract: Seasonal epidemics of influenza and the respiratory syncytial virus (RSV) are the cause of substantial morbidity and mortality among children. During the global coronavirus disease 2019 (COVID-19) pandemic, the epidemiology of these viruses seems to have ...

    Abstract Seasonal epidemics of influenza and the respiratory syncytial virus (RSV) are the cause of substantial morbidity and mortality among children. During the global coronavirus disease 2019 (COVID-19) pandemic, the epidemiology of these viruses seems to have changed dramatically. In Australia and New Zealand, a significant decrease in both influenza and bronchiolitis have been noticed during usual peak seasons. Data from early months of winter seasons in Europe are showing similar trends. This current scenario imposes a reconsideration of the paradigm that toddlers and young schoolchildren are the main drivers of seasonal RSV outbreaks and respiratory epidemics in general. In this article, we summarize current literature, address current knowledge or role of adults in the RSV epidemiology, describe the lessons learned from pertussis epidemics and call the international community to better understand the community transmission dynamics of respiratory infections in all age groups. This can allow the establishment of better and more affordable preventive measures in the whole population level, which can ultimately save millions of child lives.
    MeSH term(s) Adult ; COVID-19 ; Child ; Humans ; Influenza, Human/epidemiology ; Pandemics ; Respiratory Syncytial Virus Infections/epidemiology ; Respiratory Syncytial Virus, Human ; SARS-CoV-2
    Language English
    Publishing date 2021-10-13
    Publishing country United States
    Document type Journal Article
    ZDB-ID 632784-9
    ISSN 1099-0496 ; 8755-6863
    ISSN (online) 1099-0496
    ISSN 8755-6863
    DOI 10.1002/ppul.25719
    Database MEDical Literature Analysis and Retrieval System OnLINE

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