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Article ; Online: Assessment of Dependence in Activities of Daily Living Among Older Patients in an Acute Care Unit.

Bailly, Vincent / Bourdel-Marchasson, Isabelle

Journal of visualized experiments : JoVE

2020 , Issue 163

Abstract: During an acute medical problem, older people may lose functional independence. ADL scales are used to assess this loss of independence. The simplest and most convenient ADL scale is the Katz Index, which measures six ADL: bathing, dressing, toileting, ... ...

Abstract	During an acute medical problem, older people may lose functional independence. ADL scales are used to assess this loss of independence. The simplest and most convenient ADL scale is the Katz Index, which measures six ADL: bathing, dressing, toileting, transferring, continence, and feeding. A lower ADL score indicates greater loss of functional independence. The ADL score prior to the acute medical problem (baseline) is estimated by questioning the patient or the caregivers, and this score is then compared with that on hospital admission. The ADL score should be monitored from hospital admission until discharge to allow early detection of changes in functional independence. Identifying any loss of functional independence before and during hospitalization provides information to caregivers regarding the risk of short-term mortality risk and complications, and the prognosis after hospitalization.
MeSH term(s)	Activities of Daily Living ; Aged ; Aged, 80 and over ; Critical Care ; Female ; Hospitalization ; Humans ; Male ; Outcome Assessment, Health Care ; Prognosis
Language	English
Publishing date	2020-09-30
Publishing country	United States
Document type	Journal Article ; Research Support, Non-U.S. Gov't ; Video-Audio Media
ZDB-ID	2259946-0
ISSN	1940-087X ; 1940-087X
ISSN (online)	1940-087X
ISSN	1940-087X
DOI	10.3791/61249
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Article: Assessment of dependence in activities of daily living among older patients in an acute care unit

Bailly, Vincent / Bourdel-Marchasson, Isabelle

Journal of visualized experiments. 2020 Sept. 30, , no. 163

2020

Abstract	During an acute medical problem, older people may lose functional independence. ADL scales are used to assess this loss of independence. The simplest and most convenient ADL scale is the Katz Index, which measures six ADL: bathing, dressing, toileting, transferring, continence, and feeding. A lower ADL score indicates greater loss of functional independence. The ADL score prior to the acute medical problem (baseline) is estimated by questioning the patient or the caregivers, and this score is then compared with that on hospital admission. The ADL score should be monitored from hospital admission until discharge to allow early detection of changes in functional independence. Identifying any loss of functional independence before and during hospitalization provides information to caregivers regarding the risk of short-term mortality risk and complications, and the prognosis after hospitalization.
Keywords	caregivers ; hospitals ; mortality ; patients ; prognosis ; risk
Language	English
Dates of publication	2020-0930
Size	p. e61249.
Publishing place	Journal of Visualized Experiments
Document type	Article
Note	NAL-AP-2-clean
ZDB-ID	2259946-0
ISSN	1940-087X
ISSN	1940-087X
DOI	10.3791/61249
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Article: L'endonucléase III d'Escherichia coli et la réparation des thymines oxydées et des sites AP.

Bailly, V

Comptes rendus des seances de la Societe de biologie et de ses filiales

1987 Volume 181, Issue 1, Page(s) 52–54

Abstract: Escherichia coli endonuclease III is not an endonuclease. It breaks the C3'-O-P bond 3' to an AP site in DNA by catalysing a beta-elimination and not a hydrolysis. Therefore, it is a phosphoric monoester-lyase. ...

Title translation	Endonuclease III of Escherichia coli and the repair of oxidized thymines and AP sites.
Abstract	Escherichia coli endonuclease III is not an endonuclease. It breaks the C3'-O-P bond 3' to an AP site in DNA by catalysing a beta-elimination and not a hydrolysis. Therefore, it is a phosphoric monoester-lyase.
MeSH term(s)	Animals ; Apurinic Acid/metabolism ; Binding Sites ; DNA Replication ; Endonucleases/physiology ; Escherichia coli/enzymology ; Polynucleotides/metabolism ; Thymine/metabolism
Chemical Substances	Polynucleotides ; Apurinic Acid (11002-22-5) ; Endonucleases (EC 3.1.-) ; Thymine (QR26YLT7LT)
Language	French
Publishing date	1987
Publishing country	France
Document type	English Abstract ; Journal Article
ZDB-ID	215879-6
ISSN	0037-9026 ; 1295-0661
ISSN	0037-9026 ; 1295-0661
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Article: Urétérorénoscopie souple avec laser Holmium-YAG dans la prise en charge des lithiases urinaires chez le patient obèse: résultats d'une cohorte monocentrique.

Laclergerie, F / Jacquemet, B / Guichard, G / Bernardini, S / Chabannes, E / Martin, L / Pastori, J / Bailly, V / Bittard, H / Kleinclauss, F

Progres en urologie : journal de l'Association francaise d'urologie et de la Societe francaise d'urologie

2014 Volume 24, Issue 10, Page(s) 634–639

Abstract: Objective: To analyze results and morbidity after flexible ureterorenoscopy (fURS) in patients with a body mass index (BMI)>30 kg/m² and to compare with results obtained in a large cohort of non-obese patients.: Methods: We conducted a retrospective ... ...

Title translation	Flexible ureterorenoscopy in obese patients: results from a large monocenter cohort.
Abstract	Objective: To analyze results and morbidity after flexible ureterorenoscopy (fURS) in patients with a body mass index (BMI)>30 kg/m² and to compare with results obtained in a large cohort of non-obese patients. Methods: We conducted a retrospective monocenter study including all fURS for urinary lithiasis performed in our institution between January 2004 and December 2010. During the study period, 497 procedures were performed. Twenty-three had to be excluded because of missing data on BMI. Thus, a total of 474 procedures were included in the final analysis, 93 for obese patients (OP) and 381 for non-obese patients (NOP). Characteristics of the patients, stones and procedures were analyzed. Success was defined as clear imaging (completely stone-free) on renal tomography and ultrasonography. Results: Mean BMI was 33.5 ± 0.3 in OP vs 23.9 ± 0.1 kg/m² in NOP (P<0.0001). Mean stone size, location, and composition were not significantly different between groups. Technical aspects (operative time, ureteral dilatation, access sheath, monobloc extraction) were also similar in OP and NOP. The immediate (63.5% for OP vs 66.1% in NOP, P=0.62) and follow-up (65.1% for OP vs 71% in NOP, P=0.26) stone-free rate were not significantly different between the groups. For stone size<1cm, SFR raised to 77% in OP vs 83% in NOP (P=0.28). The rate of minor complications Clavien II was similar in OP (7.5%) and NOP (12%). No major complication (Clavien III or IV) was observed. Conclusion: fURS is a safe and efficient option for the management of urinary lithiasis in obese patients.
MeSH term(s)	Female ; Humans ; Male ; Middle Aged ; Obesity/complications ; Postoperative Complications/epidemiology ; Postoperative Complications/etiology ; Retrospective Studies ; Ureteroscopy/adverse effects ; Urolithiasis/complications ; Urolithiasis/surgery
Language	French
Publishing date	2014-09
Publishing country	France
Document type	English Abstract ; Evaluation Studies ; Journal Article
ZDB-ID	1186190-3
ISSN	1166-7087
ISSN	1166-7087
DOI	10.1016/j.purol.2014.03.005
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Article: Météo-U-rologie : influence du climat sur les principales urgences urologiques - étude épidémiologique.

Bailly, V / Le Ray, I / Bardonnaud, N / Pillot, P / Martin, L / Pastori, J / Balssa, L / Guichard, G / Bittard, H / Kleinclauss, F

Progres en urologie : journal de l'Association francaise d'urologie et de la Societe francaise d'urologie

2014 Volume 24, Issue 9, Page(s) 535–539

Abstract: Introduction and objectives: The aim of this study was to analyze the weather influence on the onset of renal colic (RC), acute urinary retention (AUR) and testicular torsion (TT).: Materials and methods: We correlated the daily number of RC, AUR and ...

Title translation	Meteo-U-rology: climate impact on urological emergencies.
Abstract	Introduction and objectives: The aim of this study was to analyze the weather influence on the onset of renal colic (RC), acute urinary retention (AUR) and testicular torsion (TT). Materials and methods: We correlated the daily number of RC, AUR and TT cases admitted to our urology department and weather conditions between 2005 and 2009 on day-to-day basis. Eight hundred and seventy-six RC, 453 AUR and 50 TT were analyzed. Information on temperature, atmospheric pressure, relative humidity, vapor pressure, wind force, evapotranspiration and sunshine level were collected from the national meteorological office (Meteo-France) in Besançon, France. We performed a univariate and a multivariate Stepwise method in linear regression using Akaike Information Criterion. Results: We reported a statistically significant increased risk of renal colic at higher vapor pressure. Likewise, temperature seemed to be a risk factor for occurrence of renal colics. We determined an increased daily rate when maximal daily temperature rises above 20 Celsius degrees (P = 0.05). Furthermore, we observed a positive link between mean (P = 0.05) and minimal (P = 0.08) daily temperature and urolithiasis. Contrarywise AUR was more frequent when the mean temperature falls below zero Celsius degree. We also demonstrated a non-significant influence of temperature on TT, with 3 fold higher events during cold period. Much more mystic, we noted a higher AUR rate on new moon days, and fewer renal colic on full moon. Conclusions: Further investigations are necessary to understand the mechanisms underlying the relationship between urologic diseases and climate. But our findings could help us justify healthy living messages.
MeSH term(s)	Adult ; Aged ; Emergencies ; Female ; France ; Humans ; Male ; Middle Aged ; Renal Colic/epidemiology ; Retrospective Studies ; Testicular Diseases/epidemiology ; Torsion Abnormality/epidemiology ; Urinary Retention/epidemiology ; Weather
Language	French
Publishing date	2014-07
Publishing country	France
Document type	English Abstract ; Journal Article
ZDB-ID	1186190-3
ISSN	1166-7087
ISSN	1166-7087
DOI	10.1016/j.purol.2014.02.004
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Article: Yeast DNA repair proteins Rad6 and Rad18 form a heterodimer that has ubiquitin conjugating, DNA binding, and ATP hydrolytic activities

Bailly, V / Lauder, S / Prakash, S / Prakash, L

Journal of biological chemistry. Sept 12, 1997. v. 272 (37)

1997

Keywords	Saccharomyces cerevisiae ; DNA repair ; ubiquitin ; DNA-binding proteins ; binding proteins ; DNA ; adenosine triphosphate ; hydrolysis ; enzyme activity ; adenosinetriphosphatase ; single-stranded DNA
Language	English
Dates of publication	1997-0912
Size	p. 23360-23365.
Document type	Article
ZDB-ID	2997-x
ISSN	1083-351X ; 0021-9258
ISSN (online)	1083-351X
ISSN	0021-9258
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Article: The multiple activities of Escherichia coli endonuclease IV and the extreme lability of 5'-terminal base-free deoxyribose 5-phosphates.

Bailly, V / Verly, W G

The Biochemical journal

1989 Volume 259, Issue 3, Page(s) 761–768

Abstract: Escherichia coli endonuclease IV hydrolyses the C(3')-O-P bond 5' to a 3'-terminal base-free deoxyribose. It also hydrolyses the C(3')-O-P bond 5' to a 3'-terminal base-free 2',3'-unsaturated sugar produced by nicking 3' to an AP (apurinic or ... ...

Abstract	Escherichia coli endonuclease IV hydrolyses the C(3')-O-P bond 5' to a 3'-terminal base-free deoxyribose. It also hydrolyses the C(3')-O-P bond 5' to a 3'-terminal base-free 2',3'-unsaturated sugar produced by nicking 3' to an AP (apurinic or apyrimidinic) site by beta-elimination; this explains why the unproductive end produced by beta-elimination is converted by the enzyme into a 3'-OH end able to prime DNA synthesis. The action of E. coli endonuclease IV on an internal AP site is more complex: in a first step the C(3')-O-P bond 5' to the AP site is hydrolysed, but in a second step the 5'-terminal base-free deoxyribose 5'-phosphate is lost. This loss is due to a spontaneous beta-elimination reaction in which the enzyme plays no role. The extreme lability of the C(3')-O-P bond 3' to a 5'-terminal AP site contrasts with the relative stability of the same bond 3' to an internal AP site; in the absence of beta-elimination catalysts, at 37 degrees C the half-life of the former is about 2 h and that of the latter 200 h. The extreme lability of a 5'-terminal AP site means that, after nicking 5' to an AP site with an AP endonuclease, in principle no 5'----3' exonuclease is needed to excise the AP site: it falls off spontaneously. We have repaired DNA containing AP sites with an AP endonuclease (E. coli endonuclease IV or the chromatin AP endonuclease from rat liver), a DNA polymerase devoid of 5'----3' exonuclease activity (Klenow polymerase or rat liver DNA polymerase beta) and a DNA ligase. Catalysts of beta-elimination, such as spermine, can drastically shorten the already brief half-life of a 5'-terminal AP site; it is what very probably happens in the chromatin of eukaryotic cells. E. coli endonuclease IV also probably participates in the repair of strand breaks produced by ionizing radiations: as E. coli endonuclease VI/exonuclease III, it is a 3'-phosphoglycollatase and also a 3'-phosphatase. The 3'-phosphatase activity of E. coli endonuclease VI/exonuclease III and E. coli endonuclease IV can also be useful when the AP site has been excised by a beta delta-elimination reaction.
MeSH term(s)	DNA Repair ; DNA, Bacterial ; DNA-(Apurinic or Apyrimidinic Site) Lyase ; Deoxyribonuclease IV (Phage T4-Induced) ; Endodeoxyribonucleases/metabolism ; Escherichia coli/genetics ; Escherichia coli Proteins ; Hydrolysis ; Oligonucleotides/metabolism ; Pentosephosphates/metabolism ; Ribosemonophosphates/metabolism
Chemical Substances	DNA, Bacterial ; Escherichia coli Proteins ; Oligonucleotides ; Pentosephosphates ; Ribosemonophosphates ; Endodeoxyribonucleases (EC 3.1.-) ; Deoxyribonuclease IV (Phage T4-Induced) (EC 3.1.21.2) ; endonuclease IV, E coli (EC 3.1.21.2) ; DNA-(Apurinic or Apyrimidinic Site) Lyase (EC 4.2.99.18)
Language	English
Publishing date	1989-05-01
Publishing country	England
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2969-5
ISSN	1470-8728 ; 0264-6021 ; 0006-2936 ; 0306-3275
ISSN (online)	1470-8728
ISSN	0264-6021 ; 0006-2936 ; 0306-3275
DOI	10.1042/bj2590761
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Article: Yeast DNA repair proteins Rad6 and Rad18 form a heterodimer that has ubiquitin conjugating, DNA binding, and ATP hydrolytic activities.

Bailly, V / Lauder, S / Prakash, S / Prakash, L

The Journal of biological chemistry

1997 Volume 272, Issue 37, Page(s) 23360–23365

Abstract: The RAD6 and RAD18 genes of Saccharomyces cerevisiae are required for postreplicative bypass of ultraviolet (UV)-damaged DNA and for UV mutagenesis. The RAD6 encoded protein is a ubiquitin conjugating enzyme, and RAD18 encodes a protein containing a RING ...

Abstract	The RAD6 and RAD18 genes of Saccharomyces cerevisiae are required for postreplicative bypass of ultraviolet (UV)-damaged DNA and for UV mutagenesis. The RAD6 encoded protein is a ubiquitin conjugating enzyme, and RAD18 encodes a protein containing a RING finger motif and a nucleotide binding motif. Rad18 can be co-immunoprecipitated with Rad6, indicating that the two proteins exist in a complex in vivo. Here, we co-overproduce the two proteins using a yeast multicopy plasmid, purify the Rad6-Rad18 complex to near homogeneity, and show that the complex is heterodimeric. The Rad6-Rad18 heterodimer has ubiquitin conjugating activity, binds single-stranded DNA, and possesses single-stranded DNA-dependent ATPase activity. The Rad6-Rad18 complex provides the first example wherein a ubiquitin conjugating activity is physically associated with DNA binding and ATPase activities provided by an associated protein factor. The co-existence of these activities should provide the complex with the ability to recognize single-stranded DNA resulting from stalling of the replication machinery at DNA damage sites and to recognize the components of the DNA replication machinery for ubiquitination by Rad6.
MeSH term(s)	Adenosine Triphosphatases/metabolism ; DNA Repair ; DNA, Single-Stranded/metabolism ; DNA-Binding Proteins/genetics ; DNA-Binding Proteins/isolation & purification ; DNA-Binding Proteins/metabolism ; Dimerization ; Ligases/genetics ; Ligases/isolation & purification ; Ligases/metabolism ; Protein Binding ; Recombinant Proteins/metabolism ; Saccharomyces cerevisiae ; Saccharomyces cerevisiae Proteins ; Ubiquitin-Conjugating Enzymes ; Ubiquitins/metabolism
Chemical Substances	DNA, Single-Stranded ; DNA-Binding Proteins ; RAD18 protein, S cerevisiae ; Recombinant Proteins ; Saccharomyces cerevisiae Proteins ; Ubiquitins ; RAD6 protein, S cerevisiae (EC 2.3.2.23) ; Ubiquitin-Conjugating Enzymes (EC 2.3.2.23) ; Adenosine Triphosphatases (EC 3.6.1.-) ; Ligases (EC 6.-)
Language	English
Publishing date	1997-09-12
Publishing country	United States
Document type	Journal Article ; Research Support, U.S. Gov't, P.H.S.
ZDB-ID	2997-x
ISSN	1083-351X ; 0021-9258
ISSN (online)	1083-351X
ISSN	0021-9258
DOI	10.1074/jbc.272.37.23360
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Article: Domains required for dimerization of yeast Rad6 ubiquitin-conjugating enzyme and Rad18 DNA binding protein.

Bailly, V / Prakash, S / Prakash, L

Molecular and cellular biology

1997 Volume 17, Issue 8, Page(s) 4536–4543

Abstract: The RAD6 gene of Saccharomyces cerevisiae encodes a ubiquitin-conjugating enzyme required for postreplicational repair of UV-damaged DNA and for damage-induced mutagenesis. In addition, Rad6 functions in the N end rule pathway of protein degradation. ... ...

Abstract	The RAD6 gene of Saccharomyces cerevisiae encodes a ubiquitin-conjugating enzyme required for postreplicational repair of UV-damaged DNA and for damage-induced mutagenesis. In addition, Rad6 functions in the N end rule pathway of protein degradation. Rad6 mediates its DNA repair role via its association with Rad18, whose DNA binding activity may target the Rad6-Rad18 complex to damaged sites in DNA. In its role in N end-dependent protein degradation, Rad6 interacts with the UBR1-encoded ubiquitin protein ligase (E3) enzyme. Previous studies have indicated the involvement of N-terminal and C-terminal regions of Rad6 in interactions with Ubr1. Here, we identify the regions of Rad6 and Rad18 that are involved in the dimerization of these two proteins. We show that a region of 40 amino acids towards the C terminus of Rad18 (residues 371 to 410) is sufficient for interaction with Rad6. This region of Rad18 contains a number of nonpolar residues that have been conserved in helix-loop-helix motifs of other proteins. Our studies indicate the requirement for residues 141 to 149 at the C terminus, and suggest the involvement of residues 10 to 22 at the N terminus of Rad6, in the interaction with Rad18. Each of these regions of Rad6 is indicated to form an amphipathic helix.
MeSH term(s)	Amino Acid Sequence ; DNA Repair ; DNA-Binding Proteins/chemistry ; DNA-Binding Proteins/genetics ; Dimerization ; Helix-Loop-Helix Motifs ; Ligases/chemistry ; Ligases/genetics ; Molecular Sequence Data ; Protein Structure, Secondary ; Recombinant Fusion Proteins/metabolism ; Saccharomyces cerevisiae/enzymology ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae Proteins ; Ubiquitin-Conjugating Enzymes ; Zinc Fingers
Chemical Substances	DNA-Binding Proteins ; RAD18 protein, S cerevisiae ; Recombinant Fusion Proteins ; Saccharomyces cerevisiae Proteins ; RAD6 protein, S cerevisiae (EC 2.3.2.23) ; Ubiquitin-Conjugating Enzymes (EC 2.3.2.23) ; Ligases (EC 6.-)
Language	English
Publishing date	1997-08
Publishing country	United States
Document type	Journal Article ; Research Support, U.S. Gov't, P.H.S.
ZDB-ID	779397-2
ISSN	1098-5549 ; 0270-7306
ISSN (online)	1098-5549
ISSN	0270-7306
DOI	10.1128/MCB.17.8.4536
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Article: AP endonucleases and AP lyases.

Bailly, V / Verly, W G

Nucleic acids research

1989 Volume 17, Issue 9, Page(s) 3617–3618

MeSH term(s)	DNA Repair ; DNA-(Apurinic or Apyrimidinic Site) Lyase ; Deoxyribonuclease IV (Phage T4-Induced) ; Endodeoxyribonucleases/metabolism ; Terminology as Topic
Chemical Substances	Endodeoxyribonucleases (EC 3.1.-) ; Deoxyribonuclease IV (Phage T4-Induced) (EC 3.1.21.2) ; deoxyribonuclease V (EC 3.1.21.7) ; DNA-(Apurinic or Apyrimidinic Site) Lyase (EC 4.2.99.18)
Language	English
Publishing date	1989-05-11
Publishing country	England
Document type	Journal Article
ZDB-ID	186809-3
ISSN	0305-1048 ; 0301-5610
ISSN	0305-1048 ; 0301-5610
DOI	10.1093/nar/17.9.3617
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