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  1. Article ; Online: Chemoselective derivatisation and ultrahigh resolution mass spectrometry for the determination of hydroxyl functional groups within complex bio-oils.

    Palacio Lozano, Diana Catalina / Jones, Hugh E / Barrow, Mark P / Wills, Martin

    RSC advances

    2023  Volume 13, Issue 26, Page(s) 17727–17741

    Abstract: Bio-oils are a renewable alternative resource for the production of fine chemicals and fuels. Bio-oils are characterised by a high content of oxygenated compounds with a diverse array of different chemical functionalities. Here, we performed a chemical ... ...

    Abstract Bio-oils are a renewable alternative resource for the production of fine chemicals and fuels. Bio-oils are characterised by a high content of oxygenated compounds with a diverse array of different chemical functionalities. Here, we performed a chemical reaction to transform the hydroxyl group of the various components in a bio-oil prior to characterisation with ultrahigh resolution mass spectrometry (UHRMS). The derivatisations were first evaluated using twenty lignin-representative standards with different structural features. Our results indicate a highly chemoselective transformation of the hydroxyl group despite the presence of other functional groups. Mono- and di-acetate products were observed in acetone-acetic anhydride (acetone-Ac
    Language English
    Publishing date 2023-06-12
    Publishing country England
    Document type Journal Article
    ISSN 2046-2069
    ISSN (online) 2046-2069
    DOI 10.1039/d3ra02779a
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Solvent and Flow Rate Effects on the Observed Compositional Profiles and the Relative Intensities of Radical and Protonated Species in Atmospheric Pressure Photoionization Mass Spectrometry

    Thomas, Mary J. / Chan, Ho Yi Holly / Palacio Lozano, Diana Catalina / Barrow, Mark P.

    Analytical chemistry. 2022 Mar. 14, v. 94, no. 12

    2022  

    Abstract: Sample preparation and instrument parameters have regularly been demonstrated to impact upon the observed results in atmospheric pressure photoionization, mass spectrometry (MS), and analytical techniques in general but may be overlooked when such ... ...

    Abstract Sample preparation and instrument parameters have regularly been demonstrated to impact upon the observed results in atmospheric pressure photoionization, mass spectrometry (MS), and analytical techniques in general but may be overlooked when such methods are applied to the characterization of real-world samples. An initial investigation into different solvent systems demonstrated that the inclusion of ethyl acetate inverted the ratio of relative intensities of radical and protonated species (R/P). Design of experiments was performed and indicated that the injection flow rate is also a significant factor. The impact of the solvent system and flow rate on signal intensity, the observed compositional profile, and R/P of selected molecular groups is demonstrated further. An inversion of R/P is observed at higher flow rates in solvent systems commonly used in petroleomics studies, effecting a loss of molecular speciation. The findings presented reiterate the critical importance in considering experimental parameters when interpreting the results of analytical procedures.
    Keywords analytical chemistry ; atmospheric pressure ; ethyl acetate ; mass spectrometry ; solvents
    Language English
    Dates of publication 2022-0314
    Size p. 4954-4960.
    Publishing place American Chemical Society
    Document type Article
    ZDB-ID 1508-8
    ISSN 1520-6882 ; 0003-2700
    ISSN (online) 1520-6882
    ISSN 0003-2700
    DOI 10.1021/acs.analchem.1c03463
    Database NAL-Catalogue (AGRICOLA)

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  3. Article ; Online: Solvent and Flow Rate Effects on the Observed Compositional Profiles and the Relative Intensities of Radical and Protonated Species in Atmospheric Pressure Photoionization Mass Spectrometry.

    Thomas, Mary J / Chan, Ho Yi Holly / Palacio Lozano, Diana Catalina / Barrow, Mark P

    Analytical chemistry

    2022  Volume 94, Issue 12, Page(s) 4954–4960

    Abstract: Sample preparation and instrument parameters have regularly been demonstrated to impact upon the observed results in atmospheric pressure photoionization, mass spectrometry (MS), and analytical techniques in general but may be overlooked when such ... ...

    Abstract Sample preparation and instrument parameters have regularly been demonstrated to impact upon the observed results in atmospheric pressure photoionization, mass spectrometry (MS), and analytical techniques in general but may be overlooked when such methods are applied to the characterization of real-world samples. An initial investigation into different solvent systems demonstrated that the inclusion of ethyl acetate inverted the ratio of relative intensities of radical and protonated species (R/P). Design of experiments was performed and indicated that the injection flow rate is also a significant factor. The impact of the solvent system and flow rate on signal intensity, the observed compositional profile, and R/P of selected molecular groups is demonstrated further. An inversion of R/P is observed at higher flow rates in solvent systems commonly used in petroleomics studies, effecting a loss of molecular speciation. The findings presented reiterate the critical importance in considering experimental parameters when interpreting the results of analytical procedures.
    MeSH term(s) Atmospheric Pressure ; Mass Spectrometry/methods ; Solvents/chemistry
    Chemical Substances Solvents
    Language English
    Publishing date 2022-03-14
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1508-8
    ISSN 1520-6882 ; 0003-2700
    ISSN (online) 1520-6882
    ISSN 0003-2700
    DOI 10.1021/acs.analchem.1c03463
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Characterization of Mineral and Synthetic Base Oils by Gas Chromatography-Mass Spectrometry and Fourier Transform Ion Cyclotron Resonance Mass Spectrometry.

    Lee, Shinjong / Palacio Lozano, Diana Catalina / Jones, Hugh E / Shin, Kyongsik / Barrow, Mark P

    Energy & fuels : an American Chemical Society journal

    2022  Volume 36, Issue 22, Page(s) 13518–13525

    Abstract: Base oil is a main component of engine oil that enables smooth operation of an internal combustion engine. There are two types of base oils, such as mineral oil and synthetic oil. In this study, Fourier transform ion cyclotron resonance mass spectrometry ...

    Abstract Base oil is a main component of engine oil that enables smooth operation of an internal combustion engine. There are two types of base oils, such as mineral oil and synthetic oil. In this study, Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) and gas chromatography-mass spectrometry (GC-MS) were used to characterize the base oils. One difficulty in analyzing base oils using MS is that the ionization of alkanes can be problematic due to low ionization efficiencies and the predominance of fragmentation. Despite these limitations, the combination of GC-MS and FT-ICR MS data can provide qualitative insights into the composition differences for these various sample types. The distinctive total ion chromatogram obtained by GC-MS of the different base oils allowed the classification of mineral oil from synthetic oil. The additional structural characteristics of paraffinic compounds were also inferred by GC-MS. FT-ICR MS coupled to two different ionization methods, atmospheric pressure photoionization (APPI) and atmospheric pressure chemical ionization (APCI), was tested for the analysis of base oils. It was determined that APPI was suitable for the analysis of aliphatic hydrocarbon compounds, where APPI minimizes the decomposition of hydrocarbon compounds compared to atmospheric pressure chemical ionization. Using APPI FT-ICR MS, the components of the oils were characterized, including not only paraffinic compounds but also cyclic compounds. In addition, the alpha olefin monomer of the synthetic oil was determined, and the homogeneity of the branched compound of the synthetic base oil was confirmed using GC-MS and FT-ICR MS results.
    Language English
    Publishing date 2022-11-02
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1483539-3
    ISSN 1520-5029 ; 0887-0624
    ISSN (online) 1520-5029
    ISSN 0887-0624
    DOI 10.1021/acs.energyfuels.2c02437
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Analytical chemistry solutions to hazard evaluation of petroleum refining products.

    Roman-Hubers, Alina T / Cordova, Alexandra C / Barrow, Mark P / Rusyn, Ivan

    Regulatory toxicology and pharmacology : RTP

    2022  Volume 137, Page(s) 105310

    Abstract: Products of petroleum refining are substances that are both complex and variable. These substances are produced and distributed in high volumes; therefore, they are heavily scrutinized in terms of their potential hazards and risks. Because of inherent ... ...

    Abstract Products of petroleum refining are substances that are both complex and variable. These substances are produced and distributed in high volumes; therefore, they are heavily scrutinized in terms of their potential hazards and risks. Because of inherent compositional complexity and variability, unique challenges exist in terms of their registration and evaluation. Continued dialogue between the industry and the decision-makers has revolved around the most appropriate approach to fill data gaps and ensure safe use of these substances. One of the challenging topics has been the extent of chemical compositional characterization of products of petroleum refining that may be necessary for substance identification and hazard evaluation. There are several novel analytical methods that can be used for comprehensive characterization of petroleum substances and identification of most abundant constituents. However, translation of the advances in analytical chemistry to regulatory decision-making has not been as evident. Therefore, the goal of this review is to bridge the divide between the science of chemical characterization of petroleum and the needs and expectations of the decision-makers. Collectively, mutual appreciation of the regulatory guidance and the realities of what information these new methods can deliver should facilitate the path forward in ensuring safety of the products of petroleum refining.
    MeSH term(s) Petroleum/toxicity
    Chemical Substances Petroleum
    Language English
    Publishing date 2022-12-05
    Publishing country Netherlands
    Document type Journal Article ; Review
    ZDB-ID 604672-1
    ISSN 1096-0295 ; 0273-2300
    ISSN (online) 1096-0295
    ISSN 0273-2300
    DOI 10.1016/j.yrtph.2022.105310
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Characterizing lignins from various sources and treatment processes after optimized sample preparation techniques and analysis via ESI-HRMS and custom mass defect software tools.

    Letourneau, Dane R / Marzullo, Bryan P / Alexandridou, Anastasia / Barrow, Mark P / O'Connor, Peter B / Volmer, Dietrich A

    Analytical and bioanalytical chemistry

    2023  Volume 415, Issue 27, Page(s) 6663–6675

    Abstract: Sample preparation of complex, natural mixtures such as lignin prior to mass spectrometry analysis, however minimal, is a critical step in ensuring accurate and interference-free results. Modern shotgun-MS techniques, where samples are directly injected ... ...

    Abstract Sample preparation of complex, natural mixtures such as lignin prior to mass spectrometry analysis, however minimal, is a critical step in ensuring accurate and interference-free results. Modern shotgun-MS techniques, where samples are directly injected into a high-resolution mass spectrometer (HRMS) with no prior separation, usually still require basic sample pretreatment such as filtration and appropriate solvents for full dissolution and compatibility with atmospheric pressure ionization interfaces. In this study, sample preparation protocols have been established for a unique sample set consisting of a wide variety of degraded lignin samples from numerous sources and treatment processes. The samples were analyzed via electrospray (ESI)-HRMS in negative and positive ionization modes. The resulting information-rich HRMS datasets were then transformed into the mass defect space with custom R scripts as well as the open-source Constellation software as an effective way to visualize changes between the samples due to the sample preparation and ionization conditions as well as a starting point for comprehensive characterization of these varied sample sets. Optimized conditions for the four investigated lignins are proposed for ESI-HRMS analysis for the first time, giving an excellent starting point for future studies seeking to better characterize and understand these complex mixtures.
    Language English
    Publishing date 2023-09-16
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 201093-8
    ISSN 1618-2650 ; 0016-1152 ; 0372-7920
    ISSN (online) 1618-2650
    ISSN 0016-1152 ; 0372-7920
    DOI 10.1007/s00216-023-04942-x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Investigating the Influence of n-Heptane versus n-Nonane upon the Extraction of Asphaltenes

    Alostad, Latifa K. / Palacio Lozano, Diana Catalina / Gannon, Benedict / Downham, Rory P. / Jones, Hugh E. / Barrow, Mark P.

    Energy & fuels. 2022 Aug. 01, v. 36, no. 16

    2022  

    Abstract: The composition of asphaltenes is of interest due to the challenges they pose for industry and their high complexity, encompassing a range of heteroatom contents, molecular weights, double bond equivalents (DBEs), and structural motifs. They are well- ... ...

    Abstract The composition of asphaltenes is of interest due to the challenges they pose for industry and their high complexity, encompassing a range of heteroatom contents, molecular weights, double bond equivalents (DBEs), and structural motifs. They are well-known for aggregating above critical concentrations, hindering the upstream and downstream processes. Asphaltenes are defined by solubility, as they are insoluble in light paraffins such as n-heptane and soluble in aromatic solvents such as toluene. Today, enormous efforts are being invested into the characterization of asphaltenes to shed light into their structural profiles to benefit the petroleum industry and environmental sustainability. Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) provides molecular level analysis with unparalleled mass resolving power and mass accuracy, which is vital for the characterization of inherently complex crude oils and their asphaltene fractions. The aim of this research is to elucidate and compare the compositional profiles of asphaltene fractions of two petroleum samples, fractioned through two approaches: using n-heptane, as is typical practice, and n-nonane, for the purpose of testing extraction using higher molecular weight alkanes. The results highlight that the choice of solvents does indeed influence the accessibility of different species and therefore changes the observed molecular profiles of the extracted asphaltenes. n-Heptane afforded broader contributions of different heteroatomic classes and greater carbon number ranges of the observed components; the DBE distribution vs carbon number profiles were different, where the extracts produced using n-nonane displayed a greater prevalence of lower DBE species.
    Keywords asphaltenes ; carbon ; energy ; environmental sustainability ; heptane ; industry ; mass spectrometry ; molecular weight ; petroleum ; solubility ; toluene
    Language English
    Dates of publication 2022-0801
    Size p. 8663-8673.
    Publishing place American Chemical Society
    Document type Article
    ZDB-ID 1483539-3
    ISSN 1520-5029 ; 0887-0624
    ISSN (online) 1520-5029
    ISSN 0887-0624
    DOI 10.1021/acs.energyfuels.2c01168
    Database NAL-Catalogue (AGRICOLA)

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  8. Article: Unlocking the potential of biofuels via reaction pathways in van Krevelen diagrams

    Palacio Lozano, Diana Catalina / Jones, Hugh E. / Ramirez Reina, Tomas / Volpe, Roberto / Barrow, Mark P.

    Green chemistry. 2021 Nov. 16, v. 23, no. 22

    2021  

    Abstract: Production of fuels and targeted chemicals from biomass represents a current challenge. Pyrolysis of biomass generates liquid bio-oils but these are highly complex mixtures. In order to obtain the desired products, optimized reaction conditions are ... ...

    Abstract Production of fuels and targeted chemicals from biomass represents a current challenge. Pyrolysis of biomass generates liquid bio-oils but these are highly complex mixtures. In order to obtain the desired products, optimized reaction conditions are required and this, in turn, drives the need for a fundamental understanding of the complex reaction network. Bio-oils are a complex mixture of thousands of individual molecular compositions, with differing numbers of carbon, hydrogen, nitrogen, and oxygen atoms (c, h, n, and o, respectively). The compositional spaces of such complex mixtures with high oxygen contents are commonly plotted using van Krevelen diagrams, where the H/C versus O/C ratios are displayed. For a bio-oil to be effectively used in engines, further upgrading is necessary to drive the compositions towards low oxygen and high hydrogen content (thus, low O/C and high H/C values). Here, we propose reaction vectors in van Krevelen diagrams to outline the possible reaction routes that favour the production of molecules with increased energy density, using examples of bio-oils produced from citrus waste (lemon and orange peel) and olive pulp. When reactions such as the addition or loss of CO, CO₂, CH₄, and H₂O occur, a displacement of the compositions of molecules in terms of H/C and O/C coordinates is observed. The direction and magnitude of the displacement along each axis in van Krevelen diagrams depends upon the specific reaction route and the elemental content of each molecule. As a consequence of the wide diversity of compositions, different reaction routes are suggested that include multi-step upgrading processes, including hydrogenation and the elimination of oxygen in the form of CO and CO₂. The detailed molecular composition of the starting material, plotted in van Krevelen diagrams for visualization, paves the way for greater insight into potential reaction pathways for components within these highly complex mixtures. In turn, the equations proposed hold potential to inform future production strategies, increasing the energy density of bio-oils whilst also reducing the undesirable char formation.
    Keywords Citrus ; biofuels ; biomass ; carbon ; carbon dioxide ; energy density ; green chemistry ; hydrogen ; hydrogenation ; lemons ; liquids ; nitrogen ; olive pulp ; orange peels ; oxygen ; pyrolysis ; wastes
    Language English
    Dates of publication 2021-1116
    Size p. 8949-8963.
    Publishing place The Royal Society of Chemistry
    Document type Article
    ZDB-ID 2006274-6
    ISSN 1463-9270 ; 1463-9262
    ISSN (online) 1463-9270
    ISSN 1463-9262
    DOI 10.1039/d1gc01796a
    Database NAL-Catalogue (AGRICOLA)

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  9. Article ; Online: Multimodal Tandem Mass Spectrometry Techniques for the Analysis of Phosphopeptides.

    Paris, Johanna / Theisen, Alina / Marzullo, Bryan P / Haris, Anisha / Morgan, Tomos E / Barrow, Mark P / O'Hara, John / O'Connor, Peter B

    Journal of the American Society for Mass Spectrometry

    2022  Volume 33, Issue 7, Page(s) 1126–1133

    Abstract: Collisionally activated dissociation (CAD), infrared multiphoton dissociation (IRMPD), ultraviolet photodissociation (UVPD), electron capture dissociation and electron detachment dissociation (EDD) experiments were conducted on a set of phosphopeptides, ... ...

    Abstract Collisionally activated dissociation (CAD), infrared multiphoton dissociation (IRMPD), ultraviolet photodissociation (UVPD), electron capture dissociation and electron detachment dissociation (EDD) experiments were conducted on a set of phosphopeptides, in a Fourier transform ion cyclotron resonance mass spectrometer. The fragmentation patterns were compared and varied according to the fragmentation mechanisms and the composition of the peptides. CAD and IRMPD produced similar fragmentation profiles of the phosphopeptides, while UVPD produced a large number of complementary fragments. Electron-based dissociation techniques displayed lower fragmentation efficiencies, despite retaining the labile phosphate group, and drastically different fragmentation profiles. EDD produced complex spectra whose interpretation proved challenging.
    MeSH term(s) Cyclotrons ; Electrons ; Fourier Analysis ; Phosphopeptides/chemistry ; Tandem Mass Spectrometry/methods
    Chemical Substances Phosphopeptides
    Language English
    Publishing date 2022-05-23
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1073671-2
    ISSN 1879-1123 ; 1044-0305
    ISSN (online) 1879-1123
    ISSN 1044-0305
    DOI 10.1021/jasms.1c00353
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Fine Structure in Isotopic Peak Distributions Measured Using Fourier Transform Ion Cyclotron Resonance Mass Spectrometry: A Comparison between an Infinity ICR Cell and a Dynamically Harmonized ICR Cell.

    Xu, Jingsha / Li, Meng / Marzullo, Bryan / Wootton, Christopher A / Barrow, Mark P / O'Connor, Peter B

    Journal of the American Society for Mass Spectrometry

    2022  Volume 33, Issue 8, Page(s) 1499–1509

    Abstract: The fine structure of isotopic peak distributions of glutathione in mass spectra is measured using Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) at 12 and 15 T magnetic field, with an infinity cell and a dynamically harmonized ... ...

    Abstract The fine structure of isotopic peak distributions of glutathione in mass spectra is measured using Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) at 12 and 15 T magnetic field, with an infinity cell and a dynamically harmonized cell (DHC) respectively. The resolved peaks in the fine structure of glutathione consist of
    MeSH term(s) Calibration ; Cyclotrons ; Fourier Analysis ; Glutathione ; Mass Spectrometry/methods
    Chemical Substances Glutathione (GAN16C9B8O)
    Language English
    Publishing date 2022-06-28
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1073671-2
    ISSN 1879-1123 ; 1044-0305
    ISSN (online) 1879-1123
    ISSN 1044-0305
    DOI 10.1021/jasms.2c00093
    Database MEDical Literature Analysis and Retrieval System OnLINE

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