Article ; Online: Identification of a novel monocyclic carotenoid and prediction of its biosynthetic genes in Algoriphagus sp. oki45.
Applied microbiology and biotechnology
2024 Volume 108, Issue 1, Page(s) 102
Abstract: Bacteria belonging to the genus Algoriphagus have been isolated from various sources, such as Antarctic sea ice, seawater, and sediment, and some strains are known to produce orange to red pigments. However, the pigment composition and biosynthetic genes ...
Abstract | Bacteria belonging to the genus Algoriphagus have been isolated from various sources, such as Antarctic sea ice, seawater, and sediment, and some strains are known to produce orange to red pigments. However, the pigment composition and biosynthetic genes have not been fully elucidated. A new red-pigmented Algoriphagus sp. strain, oki45, was isolated from the surface of seaweed collected from Senaga-Jima Island, Okinawa, Japan. Genome comparison revealed oki45's average nucleotide identity of less than 95% to its closely related species, Algoriphagus confluentis NBRC 111222 |
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MeSH term(s) | Carotenoids ; Seawater/microbiology ; Bacteria/genetics ; Mixed Function Oxygenases/genetics ; Multigene Family ; Phylogeny ; Fatty Acids/chemistry ; RNA, Ribosomal, 16S/genetics ; DNA, Bacterial/genetics ; Sequence Analysis, DNA ; Bacterial Typing Techniques |
Chemical Substances | Carotenoids (36-88-4) ; Mixed Function Oxygenases (EC 1.-) ; Fatty Acids ; RNA, Ribosomal, 16S ; DNA, Bacterial |
Language | English |
Publishing date | 2024-01-11 |
Publishing country | Germany |
Document type | Journal Article |
ZDB-ID | 392453-1 |
ISSN | 1432-0614 ; 0171-1741 ; 0175-7598 |
ISSN (online) | 1432-0614 |
ISSN | 0171-1741 ; 0175-7598 |
DOI | 10.1007/s00253-023-12995-2 |
Database | MEDical Literature Analysis and Retrieval System OnLINE |
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