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  1. Article: Erratum to "Bladder-embedded ectopic intrauterine device with calculus".

    Xiong, Bing-Jian / Tao, Guang-Jing / Jiang, Duo

    Open medicine (Warsaw, Poland)

    2024  Volume 19, Issue 1, Page(s) 20231000

    Abstract: This corrects the article DOI: 10.1515/med-2020-0173.]. ...

    Abstract [This corrects the article DOI: 10.1515/med-2020-0173.].
    Language English
    Publishing date 2024-02-14
    Publishing country Poland
    Document type Published Erratum
    ZDB-ID 2829380-0
    ISSN 2391-5463
    ISSN 2391-5463
    DOI 10.1515/med-2023-1000
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Pd NP-loaded covalent organic framework for pH-switched Pickering emulsion catalytic dechlorination.

    Wang, Han-Hui / Li, Fei / Yao, Bing-Jian / Dong, Yu-Bin

    Chemical communications (Cambridge, England)

    2024  Volume 60, Issue 25, Page(s) 3445–3448

    Abstract: Quinoline carboxylic acid-linked and Pd nanoparticle (NP)-loaded COF nanospheres were ... ...

    Abstract Quinoline carboxylic acid-linked and Pd nanoparticle (NP)-loaded COF nanospheres were constructed
    Language English
    Publishing date 2024-03-21
    Publishing country England
    Document type Journal Article
    ZDB-ID 1472881-3
    ISSN 1364-548X ; 1359-7345 ; 0009-241X
    ISSN (online) 1364-548X
    ISSN 1359-7345 ; 0009-241X
    DOI 10.1039/d3cc05982k
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: The Rfg1 and Bcr1 transcription factors regulate acidic pH-induced filamentous growth in

    Guan, Guobo / Li, Shuaihu / Bing, Jian / Liu, Ling / Tao, Li

    Microbiology spectrum

    2023  Volume 11, Issue 6, Page(s) e0178923

    Abstract: Importance: Candida ... ...

    Abstract Importance: Candida albicans
    MeSH term(s) Humans ; Candida albicans/metabolism ; Transcription Factors/genetics ; Transcription Factors/metabolism ; Fungal Proteins/genetics ; Fungal Proteins/metabolism ; Signal Transduction ; Hydrogen-Ion Concentration ; Gene Expression Regulation, Fungal ; Hyphae/metabolism
    Chemical Substances Transcription Factors ; Fungal Proteins
    Language English
    Publishing date 2023-11-07
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2807133-5
    ISSN 2165-0497 ; 2165-0497
    ISSN (online) 2165-0497
    ISSN 2165-0497
    DOI 10.1128/spectrum.01789-23
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: PERCH: A Unified Framework for Disease Gene Prioritization.

    Feng, Bing-Jian

    Human mutation

    2017  Volume 38, Issue 3, Page(s) 243–251

    Abstract: To interpret genetic variants discovered from next-generation sequencing, integration of heterogeneous information is vital for success. This article describes a framework named PERCH (Polymorphism Evaluation, Ranking, and Classification for a Heritable ... ...

    Abstract To interpret genetic variants discovered from next-generation sequencing, integration of heterogeneous information is vital for success. This article describes a framework named PERCH (Polymorphism Evaluation, Ranking, and Classification for a Heritable trait), available at http://BJFengLab.org/. It can prioritize disease genes by quantitatively unifying a new deleteriousness measure called BayesDel, an improved assessment of the biological relevance of genes to the disease, a modified linkage analysis, a novel rare-variant association test, and a converted variant call quality score. It supports data that contain various combinations of extended pedigrees, trios, and case-controls, and allows for a reduced penetrance, an elevated phenocopy rate, liability classes, and covariates. BayesDel is more accurate than PolyPhen2, SIFT, FATHMM, LRT, Mutation Taster, Mutation Assessor, PhyloP, GERP++, SiPhy, CADD, MetaLR, and MetaSVM. The overall approach is faster and more powerful than the existing quantitative method pVAAST, as shown by the simulations of challenging situations in finding the missing heritability of a complex disease. This framework can also classify variants of unknown significance (variants of uncertain significance) by quantitatively integrating allele frequencies, deleteriousness, association, and co-segregation. PERCH is a versatile tool for gene prioritization in gene discovery research and variant classification in clinical genetic testing.
    MeSH term(s) Computational Biology/methods ; Genetic Association Studies/methods ; Genetic Predisposition to Disease ; Humans ; Polymorphism, Single Nucleotide ; Quantitative Trait, Heritable ; ROC Curve ; Reproducibility of Results ; Software
    Language English
    Publishing date 2017-01-28
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 1126646-6
    ISSN 1098-1004 ; 1059-7794
    ISSN (online) 1098-1004
    ISSN 1059-7794
    DOI 10.1002/humu.23158
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Bladder-embedded ectopic intrauterine device with calculus

    Xiong Bing-Jian / Tao Guang-Jing / Jiang Duo

    Open Medicine, Vol 15, Iss 1, Pp 501-

    2020  Volume 507

    Abstract: The present study aimed to analyze the data of embedded intrauterine device (IUD) in the bladder wall with the additional presence of calculus. This case series study included 11 female patients with partially or completely embedded IUD in the bladder ... ...

    Abstract The present study aimed to analyze the data of embedded intrauterine device (IUD) in the bladder wall with the additional presence of calculus. This case series study included 11 female patients with partially or completely embedded IUD in the bladder wall. Their median age was 34 (range, 32–39) years. The median duration of IUD placement was 36 (range, 24–60) months. The median duration of symptoms was 9 (range, 3–12) months. Six patients underwent laparoscopy: the operation duration was 129 (range, 114–162) min, blood loss was 15 (range, 10–25) mL, the hospital stay was 4 (range, 4–4.5) days, the visual analog scale (VAS) for pain at 6 h after surgery was 3 (range, 2–6), and the time to removal of the urethral catheter was 7 (range, 7–8) days. Five patients underwent open surgery: the operation duration was 126 (range, 96–192) min, blood loss was 30 (range, 20–50) mL, the hospital stay was 7 (range, 7–15) days, the VAS was 6 (range, 4–9) at 6 h after surgery, and the time to removal of the urethral catheter was 9 (range, 8–17) days. The IUD and bladder stones were successfully removed in all 11 (100%) patients.
    Keywords cystectomy ; intrauterine device ; intrauterine device migration ; laparoscopy ; surgery ; urinary bladder ; urinary bladder calculi ; Medicine ; R
    Subject code 616
    Language English
    Publishing date 2020-06-01T00:00:00Z
    Publisher De Gruyter
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  6. Article: [Effects of Foliar Application of Silicon Fertilizers on Phyllosphere Bacterial Community and Functional Genes of Paddy Irrigated with Reclaimed Water].

    Liang, Sheng-Xian / Liu, Chun-Cheng / Hu, Chao / Cui, Er-Ping / Li, Zhong-Yang / Fan, Xiang-Yang / Cui, Bing-Jian

    Huan jing ke xue= Huanjing kexue

    2024  Volume 45, Issue 1, Page(s) 555–566

    Abstract: Agricultural utilization of reclaimed water is considered to be an effective way to solve water shortage and reduce water environmental pollution. Silicon fertilizer can improve crop yield and quality and enhance crop resistance. The effect of foliar ... ...

    Abstract Agricultural utilization of reclaimed water is considered to be an effective way to solve water shortage and reduce water environmental pollution. Silicon fertilizer can improve crop yield and quality and enhance crop resistance. The effect of foliar spray with silicon fertilizer on phyllosphere microbial communities remains lacking. In this study, a pot experiment was conducted to explore the effects of different types of silicon fertilizer on the composition and diversity of a phyllosphere bacterial community and the abundances of related functional genes in rice irrigated with reclaimed water. The results showed that Firmicutes, Proteobacteria, Actinobacteriota, Bacteroidota, and Verrucomicrobiota dominated the phyllosphere bacteria of rice. The relative abundance of
    MeSH term(s) Fertilizers/analysis ; Silicon/pharmacology ; Soil/chemistry ; Water/analysis ; Bacteria/genetics ; Bacillus ; Oryza ; Soil Microbiology
    Chemical Substances Fertilizers ; Silicon (Z4152N8IUI) ; Soil ; Water (059QF0KO0R)
    Language Chinese
    Publishing date 2024-01-12
    Publishing country China
    Document type English Abstract ; Journal Article
    ISSN 0250-3301
    ISSN 0250-3301
    DOI 10.13227/j.hjkx.202302200
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Candida auris

    Bing, Jian / Du, Han / Guo, Penghao / Hu, Tianren / Xiao, Meng / Lu, Sha / Nobile, Clarissa J / Chu, Haiqing / Huang, Guanghua

    Emerging microbes & infections

    2024  Volume 13, Issue 1, Page(s) 2302843

    Abstract: The emerging human fungal ... ...

    Abstract The emerging human fungal pathogen
    MeSH term(s) Humans ; Antifungal Agents/pharmacology ; Antifungal Agents/therapeutic use ; Candida ; Candidiasis/microbiology ; Candida auris ; Disease Outbreaks ; China/epidemiology ; Microbial Sensitivity Tests
    Chemical Substances Antifungal Agents
    Language English
    Publishing date 2024-01-18
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2681359-2
    ISSN 2222-1751 ; 2222-1751
    ISSN (online) 2222-1751
    ISSN 2222-1751
    DOI 10.1080/22221751.2024.2302843
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Rapid evolution of an adaptive multicellular morphology of Candida auris during systemic infection.

    Bing, Jian / Guan, Zhangyue / Zheng, Tianhong / Ennis, Craig L / Nobile, Clarissa J / Chen, Changbin / Chu, Haiqing / Huang, Guanghua

    Nature communications

    2024  Volume 15, Issue 1, Page(s) 2381

    Abstract: Candida auris has become a serious threat to public health. The mechanisms of how this fungal pathogen adapts to the mammalian host are poorly understood. Here we report the rapid evolution of an adaptive C. auris multicellular aggregative morphology in ... ...

    Abstract Candida auris has become a serious threat to public health. The mechanisms of how this fungal pathogen adapts to the mammalian host are poorly understood. Here we report the rapid evolution of an adaptive C. auris multicellular aggregative morphology in the murine host during systemic infection. C. auris aggregative cells accumulate in the brain and exhibit obvious advantages over the single-celled yeast-form cells during systemic infection. Genetic mutations, specifically de novo point mutations in genes associated with cell division or budding processes, underlie the rapid evolution of this aggregative phenotype. Most mutated C. auris genes are associated with the regulation of cell wall integrity, cytokinesis, cytoskeletal properties, and cellular polarization. Moreover, the multicellular aggregates are notably more recalcitrant to the host antimicrobial peptides LL-37 and PACAP relative to the single-celled yeast-form cells. Overall, to survive in the host, C. auris can rapidly evolve a multicellular aggregative morphology via genetic mutations.
    MeSH term(s) Animals ; Mice ; Candida/genetics ; Candidiasis/microbiology ; Candida auris ; Saccharomyces cerevisiae ; Phenotype ; Sepsis ; Antifungal Agents ; Microbial Sensitivity Tests ; Mammals
    Chemical Substances Antifungal Agents
    Language English
    Publishing date 2024-03-16
    Publishing country England
    Document type Journal Article
    ZDB-ID 2553671-0
    ISSN 2041-1723 ; 2041-1723
    ISSN (online) 2041-1723
    ISSN 2041-1723
    DOI 10.1038/s41467-024-46786-8
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Gas-phase preparation of the dibenzo[

    Goettl, Shane J / Turner, Andrew M / Sun, Bing-Jian / Chang, Agnes H H / Hemberger, Patrick / Kaiser, Ralf I

    Chemical communications (Cambridge, England)

    2024  Volume 60, Issue 11, Page(s) 1404–1407

    Abstract: A high temperature phenyl-mediated addition-cyclization-dehydrogenation mechanism to form peri-fused polycyclic aromatic hydrocarbon (PAH) derivatives-illustrated through the formation of dibenzo[ ...

    Abstract A high temperature phenyl-mediated addition-cyclization-dehydrogenation mechanism to form peri-fused polycyclic aromatic hydrocarbon (PAH) derivatives-illustrated through the formation of dibenzo[
    Language English
    Publishing date 2024-02-01
    Publishing country England
    Document type Journal Article
    ZDB-ID 1472881-3
    ISSN 1364-548X ; 1359-7345 ; 0009-241X
    ISSN (online) 1364-548X
    ISSN 1359-7345 ; 0009-241X
    DOI 10.1039/d3cc05371g
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Candida auris

    Du, Han / Bing, Jian / Nobile, Clarissa J / Huang, Guanghua

    Virulence

    2022  Volume 13, Issue 1, Page(s) 589–591

    MeSH term(s) Antifungal Agents/pharmacology ; Antifungal Agents/therapeutic use ; Candida auris ; Candidiasis, Invasive ; China/epidemiology ; Humans ; Microbial Sensitivity Tests
    Chemical Substances Antifungal Agents
    Language English
    Publishing date 2022-04-19
    Publishing country United States
    Document type Editorial ; Research Support, Non-U.S. Gov't ; Research Support, N.I.H., Extramural
    ZDB-ID 2657572-3
    ISSN 2150-5608 ; 2150-5594
    ISSN (online) 2150-5608
    ISSN 2150-5594
    DOI 10.1080/21505594.2022.2054120
    Database MEDical Literature Analysis and Retrieval System OnLINE

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