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  1. Article ; Online: Dual species biofilms are enhanced by metabolite cross-feeding.

    Brunson, Debra N / Lam, Ling Ning / Lemos, José A

    Trends in microbiology

    2022  Volume 30, Issue 9, Page(s) 809–811

    Abstract: Enterococcus faecalis and Staphylococcus aureus are frequently co-isolated from biofilm-associated infections. A new study by Ch'ng et al. revealed that S. aureus-released heme feeds E. faecalis respiration, augmenting E. faecalis growth and overall ... ...

    Abstract Enterococcus faecalis and Staphylococcus aureus are frequently co-isolated from biofilm-associated infections. A new study by Ch'ng et al. revealed that S. aureus-released heme feeds E. faecalis respiration, augmenting E. faecalis growth and overall biofilm biomass. Their finding further supports the theory that metabolite cross-feeding is a critical aspect shaping polymicrobial biofilm interactions.
    MeSH term(s) Biofilms ; Enterococcus faecalis ; Humans ; Staphylococcal Infections ; Staphylococcus aureus
    Language English
    Publishing date 2022-07-20
    Publishing country England
    Document type Journal Article ; Comment
    ZDB-ID 1158963-2
    ISSN 1878-4380 ; 0966-842X
    ISSN (online) 1878-4380
    ISSN 0966-842X
    DOI 10.1016/j.tim.2022.07.003
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Methods for Using the Galleria mellonella Invertebrate Model to Probe Enterococcus faecalis Pathogenicity.

    Lam, Ling Ning / Brunson, Debra N / Kajfasz, Jessica K / Lemos, José A

    Methods in molecular biology (Clifton, N.J.)

    2022  Volume 2427, Page(s) 177–183

    Abstract: The Enterococci, mainly Enterococcus faecalis and E. faecium, are ubiquitous members of the human gastrointestinal tract consortia but also a leading cause of opportunistic infections. The global rise in human-associated enterococcal infections, often ... ...

    Abstract The Enterococci, mainly Enterococcus faecalis and E. faecium, are ubiquitous members of the human gastrointestinal tract consortia but also a leading cause of opportunistic infections. The global rise in human-associated enterococcal infections, often caused by multidrug resistant strains, highlights an urgent need to identify the bacterial factors contributing to its pathogenicity such that new therapies can be devised. The use of the Galleria mellonella (greater wax moth) larvae, commonly known as wax worm, as a model to study host-pathogen interactions has allowed the identification and characterization of numerous bacterial factors that contribute to disease in humans, serving both as an alternative and complementary approach to mammalian models. Here, we describe the methods for using G. mellonella to characterize the virulence factors of E. faecalis.
    MeSH term(s) Animals ; Disease Models, Animal ; Enterococcus faecalis/pathogenicity ; Larva/microbiology ; Moths/microbiology ; Virulence ; Virulence Factors
    Chemical Substances Virulence Factors
    Language English
    Publishing date 2022-05-23
    Publishing country United States
    Document type Journal Article
    ISSN 1940-6029
    ISSN (online) 1940-6029
    DOI 10.1007/978-1-0716-1971-1_15
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Identification of Multiple Iron Uptake Mechanisms in Enterococcus faecalis and Their Relationship to Virulence.

    Brunson, Debra N / Colomer-Winter, Cristina / Lam, Ling Ning / Lemos, José A

    Infection and immunity

    2023  Volume 91, Issue 4, Page(s) e0049622

    Abstract: Among the unfavorable conditions bacteria encounter within the host is restricted access to essential trace metals such as iron. To overcome iron deficiency, bacteria deploy multiple strategies to scavenge iron from host tissues, with abundant examples ... ...

    Abstract Among the unfavorable conditions bacteria encounter within the host is restricted access to essential trace metals such as iron. To overcome iron deficiency, bacteria deploy multiple strategies to scavenge iron from host tissues, with abundant examples of iron acquisition systems being implicated in bacterial pathogenesis. Yet the mechanisms utilized by the major nosocomial pathogen Enterococcus faecalis to maintain intracellular iron balance are poorly understood. In this study, we conducted a systematic investigation to identify and characterize the iron acquisition mechanisms of E. faecalis and to determine their contribution to virulence. Bioinformatic analysis and literature surveys revealed that E. faecalis possesses three conserved iron uptake systems. Through transcriptomics, we discovered two novel ABC-type transporters that mediate iron uptake. While inactivation of a single transporter had minimal impact on the ability of E. faecalis to maintain iron homeostasis, inactivation of all five systems (Δ5Fe strain) disrupted intracellular iron homeostasis and considerably impaired cell growth under iron deficiency. Virulence of the Δ5Fe strain was generally impaired in different animal models but showed niche-specific variations in mouse models, leading us to suspect that heme can serve as an iron source to E. faecalis during mammalian infections. Indeed, heme supplementation restored growth of Δ5Fe under iron depletion and virulence in an invertebrate infection model. This study revealed that the collective contribution of five iron transporters promotes E. faecalis virulence and that the ability to acquire and utilize heme as an iron source is critical to the systemic dissemination of E. faecalis.
    MeSH term(s) Enterococcus faecalis/metabolism ; Enterococcus faecalis/pathogenicity ; Virulence ; ATP-Binding Cassette Transporters/genetics ; ATP-Binding Cassette Transporters/metabolism ; Iron/metabolism ; Gene Expression Regulation, Bacterial ; Bacterial Proteins/metabolism ; Biological Transport ; Heme/metabolism ; Gram-Positive Bacterial Infections/metabolism ; Gram-Positive Bacterial Infections/microbiology ; Humans
    Chemical Substances ATP-Binding Cassette Transporters ; Iron (E1UOL152H7) ; Bacterial Proteins ; Heme (42VZT0U6YR)
    Language English
    Publishing date 2023-03-13
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 218698-6
    ISSN 1098-5522 ; 0019-9567
    ISSN (online) 1098-5522
    ISSN 0019-9567
    DOI 10.1128/iai.00496-22
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Dual species biofilms are enhanced by metabolite cross-feeding

    Brunson, Debra N. / Lam, Ling Ning / Lemos, José A.

    Trends in microbiology. 2022,

    2022  

    Abstract: Enterococcus faecalis and Staphylococcus aureus are frequently co-isolated from biofilm-associated infections. A new study by Ch’ng et al. revealed that S. aureus-released heme feeds E. faecalis respiration, augmenting E. faecalis growth and overall ... ...

    Abstract Enterococcus faecalis and Staphylococcus aureus are frequently co-isolated from biofilm-associated infections. A new study by Ch’ng et al. revealed that S. aureus-released heme feeds E. faecalis respiration, augmenting E. faecalis growth and overall biofilm biomass. Their finding further supports the theory that metabolite cross-feeding is a critical aspect shaping polymicrobial biofilm interactions.
    Keywords Enterococcus faecalis ; Staphylococcus aureus ; biofilm ; biomass ; heme ; metabolites ; microbiology
    Language English
    Publishing place Elsevier Ltd
    Document type Article
    Note Pre-press version
    ZDB-ID 1158963-2
    ISSN 1878-4380 ; 0966-842X
    ISSN (online) 1878-4380
    ISSN 0966-842X
    DOI 10.1016/j.tim.2022.07.003
    Database NAL-Catalogue (AGRICOLA)

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  5. Article ; Online: The AdcACB/AdcAII system is essential for zinc homeostasis and an important contributor of

    Lam, Ling Ning / Brunson, Debra N / Molina, Jonathan J / Flores-Mireles, Ana L / Lemos, José A

    Virulence

    2022  Volume 13, Issue 1, Page(s) 592–608

    Abstract: Bacterial pathogens require a variety of micronutrients for growth, including trace metals such as iron, manganese, and zinc (Zn). Despite their relative abundance in host environments, access to these metals is severely restricted during infection due ... ...

    Abstract Bacterial pathogens require a variety of micronutrients for growth, including trace metals such as iron, manganese, and zinc (Zn). Despite their relative abundance in host environments, access to these metals is severely restricted during infection due to host-mediated defense mechanisms collectively known as nutritional immunity. Despite a growing appreciation of the importance of Zn in host-pathogen interactions, the mechanisms of Zn homeostasis and the significance of Zn to the pathophysiology of
    MeSH term(s) Animals ; Bacterial Proteins/genetics ; Enterococcus faecalis/genetics ; Homeostasis ; Mice ; Virulence ; Zinc
    Chemical Substances Bacterial Proteins ; Zinc (J41CSQ7QDS)
    Language English
    Publishing date 2022-02-27
    Publishing country United States
    Document type Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't
    ZDB-ID 2657572-3
    ISSN 2150-5608 ; 2150-5594
    ISSN (online) 2150-5608
    ISSN 2150-5594
    DOI 10.1080/21505594.2022.2056965
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Optimized Replication of Arrayed Bacterial Mutant Libraries Increases Access to Biological Resources.

    Willett, Julia L E / Barnes, Aaron M T / Brunson, Debra N / Lecomte, Alexandre / Robertson, Ethan B / Dunny, Gary M

    Microbiology spectrum

    2023  Volume 11, Issue 4, Page(s) e0169323

    Abstract: Biological collections, including arrayed libraries of single transposon (Tn) or deletion mutants, greatly accelerate the pace of bacterial genetic research. Despite the importance of these resources, few protocols exist for the replication and ... ...

    Abstract Biological collections, including arrayed libraries of single transposon (Tn) or deletion mutants, greatly accelerate the pace of bacterial genetic research. Despite the importance of these resources, few protocols exist for the replication and distribution of these materials. Here, we describe a protocol for creating multiple replicates of an arrayed bacterial Tn library consisting of approximately 6,800 mutants in 96-well plates (73 plates). Our protocol provides multiple checkpoints to guard against contamination and minimize genetic drift caused by freeze/thaw cycles. This approach can also be scaled for arrayed culture collections of various sizes. Overall, this protocol is a valuable resource for other researchers considering the construction and distribution of arrayed culture collection resources for the benefit of the greater scientific community.
    MeSH term(s) Bacteria ; Gene Library ; DNA Transposable Elements ; Mutagenesis, Insertional
    Chemical Substances DNA Transposable Elements
    Language English
    Publishing date 2023-07-11
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Research Support, N.I.H., Extramural
    ZDB-ID 2807133-5
    ISSN 2165-0497 ; 2165-0497
    ISSN (online) 2165-0497
    ISSN 2165-0497
    DOI 10.1128/spectrum.01693-23
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article: Optimized replication of arrayed bacterial mutant libraries increase access to biological resources.

    Willett, Julia L E / Barnes, Aaron M T / Brunson, Debra N / Lecomte, Alexandre / Robertson, Ethan B / Dunny, Gary M

    bioRxiv : the preprint server for biology

    2023  

    Abstract: Biological collections, including arrayed libraries of single transposon or deletion mutants, greatly accelerate the pace of bacterial genetics research. Despite the importance of these resources, few protocols exist for the replication and distribution ... ...

    Abstract Biological collections, including arrayed libraries of single transposon or deletion mutants, greatly accelerate the pace of bacterial genetics research. Despite the importance of these resources, few protocols exist for the replication and distribution of these materials. Here, we describe a protocol for creating multiple replicates of an arrayed bacterial Tn library consisting of approximately 6,800 mutants in 73 × 96-well plates. Our protocol provides multiple checkpoints to guard against contamination and minimize genetic drift caused by freeze/thaw cycles. This approach can also be scaled for arrayed culture collections of various sizes. Overall, this protocol is a valuable resource for other researchers considering the construction and distribution of arrayed culture collection resources for the benefit of the greater scientific community.
    Importance: Arrayed mutant collections drive robust genetic screens, yet few protocols exist for replication of these resources and subsequent quality control. Increasing distribution of arrayed biological collections will increase accessibility to and use of these resources. Developing standardized techniques for replication of these resources is essential for ensuring their quality and usefulness to the scientific community.
    Language English
    Publishing date 2023-04-25
    Publishing country United States
    Document type Preprint
    DOI 10.1101/2023.04.25.537918
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Porin loss in Klebsiella pneumoniae clinical isolates impacts production of virulence factors and survival within macrophages.

    Brunson, Debra N / Maldosevic, Emir / Velez, Amanda / Figgins, Erika / Ellis, Terri N

    International journal of medical microbiology : IJMM

    2019  Volume 309, Issue 3-4, Page(s) 213–224

    Abstract: Clinical isolates of Klebsiella pneumoniae are often resistant to beta-lactam antibiotics via the acquisition of extended spectrum beta lactamase (ESBL) enzymes paired with loss of one or both major outer membrane porins. It has been well established ... ...

    Abstract Clinical isolates of Klebsiella pneumoniae are often resistant to beta-lactam antibiotics via the acquisition of extended spectrum beta lactamase (ESBL) enzymes paired with loss of one or both major outer membrane porins. It has been well established that loss of OmpK35 and/or OmpK36 correlates with increased minimum inhibitory concentrations of antibiotics that target the peptidoglycan. However, little is known concerning the downstream effects porin loss might have on other major virulence factors such as the polysaccharide capsule or LPS. Furthermore, it is unknown whether these cumulative changes impact pathogenesis. Therefore, the focus of this study was to identify alterations in production of the major virulence factors due to porin loss; and to investigate the effect these changes have on host pathogen interactions. Our data demonstrates that loss of a single porin is paired with reductions in capsule, increased LPS content, and up-regulated transcription of compensatory porin genes. In contrast, loss of both porins resulted in a significant increase in capsule production. Loss of OmpK35 alone or dual porin loss was further associated with reduced oxidative burst by macrophages and increased ability of the bacteria to survive phagocytic killing. These data indicate that porin loss is accompanied by a suite of changes in other virulence-associated factors. These cumulative changes act to nullify any negative fitness effect due to lack of the nonspecific porin proteins, allowing the bacteria to grow and survive phagocytic immune responses.
    MeSH term(s) Animals ; Bacterial Capsules/metabolism ; Bacterial Outer Membrane Proteins/genetics ; Bacterial Outer Membrane Proteins/metabolism ; Host-Pathogen Interactions ; Humans ; Klebsiella Infections/microbiology ; Klebsiella pneumoniae/genetics ; Klebsiella pneumoniae/isolation & purification ; Klebsiella pneumoniae/pathogenicity ; Klebsiella pneumoniae/physiology ; Lipopolysaccharides/metabolism ; Macrophages/metabolism ; Macrophages/microbiology ; Mice ; Microbial Viability ; Porins/deficiency ; Porins/genetics ; RAW 264.7 Cells ; Transcription, Genetic ; Virulence Factors/genetics ; Virulence Factors/metabolism ; beta-Lactamases/genetics ; beta-Lactamases/metabolism
    Chemical Substances Bacterial Outer Membrane Proteins ; Lipopolysaccharides ; Porins ; Virulence Factors ; beta-Lactamases (EC 3.5.2.6)
    Language English
    Publishing date 2019-04-16
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2006518-8
    ISSN 1618-0607 ; 1438-4221
    ISSN (online) 1618-0607
    ISSN 1438-4221
    DOI 10.1016/j.ijmm.2019.04.001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Porin Loss Impacts the Host Inflammatory Response to Outer Membrane Vesicles of Klebsiella pneumoniae.

    Turner, Kelli L / Cahill, Bethaney K / Dilello, Sarah K / Gutel, Dedra / Brunson, Debra N / Albertí, Sebastián / Ellis, Terri N

    Antimicrobial agents and chemotherapy

    2015  Volume 60, Issue 3, Page(s) 1360–1369

    Abstract: Antibiotic-resistant strains of Klebsiella pneumoniae often exhibit porin loss. In this study, we investigated how porin loss impacted the composition of secreted outer membrane vesicles as well as their ability to trigger proinflammatory cytokine ... ...

    Abstract Antibiotic-resistant strains of Klebsiella pneumoniae often exhibit porin loss. In this study, we investigated how porin loss impacted the composition of secreted outer membrane vesicles as well as their ability to trigger proinflammatory cytokine secretion by macrophages. We hypothesize that porin loss associated with antibiotic resistance will directly impact both the composition of outer membrane vesicles and their interactions with phagocytic cells. Using clonally related clinical isolates of extended-spectrum beta-lactamase (ESBL)-positive Klebsiella pneumoniae with different patterns of porin expression, we demonstrated that altered expression of OmpK35 and OmpK36 results in broad alterations to the protein profile of secreted vesicles. Additionally, the level of OmpA incorporation was elevated in strains lacking a single porin. Porin loss significantly impacted macrophage inflammatory responses to purified vesicles. Outer membrane vesicles lacking both OmpK35 and OmpK36 elicited significantly lower levels of proinflammatory cytokine secretion than vesicles from strains expressing one or both porins. These data demonstrate that antibiotic resistance-associated porin loss has a broad and significant effect on both the composition of outer membrane vesicles and their interactions with phagocytic cells, which may impact bacterial survival and inflammatory reactions in the host.
    MeSH term(s) Animals ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Cell Line ; Gene Expression Regulation, Bacterial ; Granulocyte-Macrophage Colony-Stimulating Factor/metabolism ; Host-Pathogen Interactions/physiology ; Inflammation/microbiology ; Klebsiella pneumoniae/growth & development ; Klebsiella pneumoniae/pathogenicity ; Macrophages/metabolism ; Macrophages/microbiology ; Macrophages/pathology ; Mice ; Porins/genetics ; Porins/metabolism ; Secretory Vesicles/genetics ; Secretory Vesicles/metabolism ; Tumor Necrosis Factor-alpha/metabolism
    Chemical Substances Bacterial Proteins ; OmpK35 porin, Klebsiella pneumoniae ; OmpK36 protein, Klebsiella pneumoniae ; Porins ; Tumor Necrosis Factor-alpha ; Granulocyte-Macrophage Colony-Stimulating Factor (83869-56-1)
    Language English
    Publishing date 2015-12-14
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 217602-6
    ISSN 1098-6596 ; 0066-4804
    ISSN (online) 1098-6596
    ISSN 0066-4804
    DOI 10.1128/AAC.01627-15
    Database MEDical Literature Analysis and Retrieval System OnLINE

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