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  1. Article: Increased Serum Levels of miR-125b and miR-132 in Fragile X Syndrome: A Preliminary Study.

    Couto, Rowena Rubim / Kubaski, Francyne / Siebert, Marina / Félix, Têmis Maria / Brusius-Facchin, Ana Carolina / Leistner-Segal, Sandra

    Neurology. Genetics

    2022  Volume 8, Issue 6, Page(s) e200024

    Abstract: Background and objectives: Fragile X syndrome (FXS) is a neurodevelopmental disorder, identified as the most common cause of hereditary intellectual disability and monogenic cause of autism spectrum disorders (ASDs), caused by the loss of fragile X ... ...

    Abstract Background and objectives: Fragile X syndrome (FXS) is a neurodevelopmental disorder, identified as the most common cause of hereditary intellectual disability and monogenic cause of autism spectrum disorders (ASDs), caused by the loss of fragile X mental retardation protein (FMRP). FMRP is an RNA-binding protein, a regulator of translation that plays an important role in neurodevelopment, and its loss causes cognitive and behavioral deficits. MicroRNAs (miRNAs) are small molecules that regulate gene expression in diverse biological processes. Previous studies found that the interaction of FMRP with miR-125b and miR-132 regulates the maturation and synaptic plasticity in animal models and miRNA dysregulation plays a role in the pathophysiology of FXS. The present study aimed to analyze the expression of miR-125b-5p and miR-132-3p in the serum of patients with FXS.
    Methods: The expressions of circulating miRNAs were studied in the serum of 10 patients with FXS and 20 controls using the real-time quantitative retrotranscribed method analyzed by relative quantification. Receiver operating characteristic (ROC) curves and the area under the ROC curve (AUC) were generated to assess the diagnostic values of the miRNAs.
    Results: We found that both miR-125b and miR-132 were increased in the serum of patients with FXS compared with controls and likely involved with FMRP loss. The AUC (95% confidence interval) of miR-125b and miR-132 was 0.94 (0.86-1.0) and 0.89 (0.77-1.0), respectively. Databases allowed for the identification of possible target genes for miR-125b and miR-132, whose products play an important role in the homeostasis of the nervous system.
    Discussion: Our results indicate that serum miR-125b and miR-132 may serve as potential biomarkers for FXS. The increased expression of circulating miR-125b and miR-132 seems to be associated with the genotype of FXS. Predicted gene targets of the differentially regulated miRNAs are involved in cognitive performance and ASD phenotype.
    Classification of evidence: This study provides Class III evidence that miR-125b and miR-132 distinguish men with FXS from normal controls.
    Language English
    Publishing date 2022-10-26
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2818607-2
    ISSN 2376-7839
    ISSN 2376-7839
    DOI 10.1212/NXG.0000000000200024
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Polymorphic variants (p.Ser141Ser and p.Arg737Gly) at the NAGLU gene are really indicative of pseudodeficiency alleles?

    Rojas Malaga, Diana / Leistner-Segal, Sandra / Brusius-Facchin, Ana Carolina

    Italian journal of pediatrics

    2019  Volume 45, Issue 1, Page(s) 60

    Abstract: Filocamo et al. recently published a paper describing the presence of a pseudodeficiency allele, constituted by p.Ser141Ser and p.Arg737Gly polymorphisms at the NAGLU gene, which leads to a reduced level of the alpha-N-acetyl-D-glucosaminidase activity. ... ...

    Abstract Filocamo et al. recently published a paper describing the presence of a pseudodeficiency allele, constituted by p.Ser141Ser and p.Arg737Gly polymorphisms at the NAGLU gene, which leads to a reduced level of the alpha-N-acetyl-D-glucosaminidase activity. Based on analysis performed in Brazilian patients, using a customized gene panel containing SGSH, NAGLU, HGSNAT and GNS we observed that p.Ser141Ser (rs659497) and p.Arg737Gly (rs86312) variants were present in homozygosis in all of our MPS IIIB patients and in the majority of MPS IIIA, IIIC and IIID patients, and there was no significant decrease of the alpha-N-acetyl-D-glucosaminidase enzyme activity in this group when compared with those without the "pseudodeficiency allele". Thus, we suggest that these two variants are not producing a pseudodeficiency allele.
    MeSH term(s) Acetylglucosaminidase/genetics ; Brazil ; Humans ; Mucopolysaccharidosis III/diagnosis ; Mucopolysaccharidosis III/genetics ; Polymorphism, Genetic/genetics
    Chemical Substances alpha-N-acetyl-D-glucosaminidase (EC 3.2.1.50) ; Acetylglucosaminidase (EC 3.2.1.52)
    Language English
    Publishing date 2019-05-14
    Publishing country England
    Document type Letter
    ZDB-ID 2084688-5
    ISSN 1824-7288 ; 1720-8424 ; 0392-5161
    ISSN (online) 1824-7288
    ISSN 1720-8424 ; 0392-5161
    DOI 10.1186/s13052-019-0657-3
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Copy number variations in SPAST and ATL1 are rare among Brazilians.

    Fussiger, Helena / Pereira, Bruna Letícia da Silva / Padilha, Janice Pacheco Dias / Donis, Karina Carvalho / Siebert, Marina / Brusius-Facchin, Ana Carolina / Baldo, Guilherme / Saute, Jonas Alex Morales

    Clinical genetics

    2023  Volume 103, Issue 5, Page(s) 580–584

    Abstract: Copy number variations (CNV) may represent a significant proportion of SPG4 and SPG3A diagnosis, the most frequent autosomal dominant subtypes of hereditary spastic paraplegias (HSP). We aimed to assess the frequency of CNVs in SPAST and ATL1 and to ... ...

    Abstract Copy number variations (CNV) may represent a significant proportion of SPG4 and SPG3A diagnosis, the most frequent autosomal dominant subtypes of hereditary spastic paraplegias (HSP). We aimed to assess the frequency of CNVs in SPAST and ATL1 and to update the molecular epidemiology of HSP families in southern Brazil. A cohort study that included 95 Brazilian index cases with clinical suspicion of HSP was conducted between April 2011 and September 2022. Multiplex Ligation Dependent Probe Amplification (MLPA) was performed in 41 cases without defined diagnosis by different massive parallel sequencing techniques (MPS). Diagnosis was obtained in 57/95 (60%) index cases, 15/57 (26.3%) being SPG4. Most frequent autosomal recessive HSP subtypes were SPG7 followed by SPG11, SPG76 and cerebrotendinous xanthomatosis. No CNVs in SPAST and ATL1 were found. Copy number variations are rare among SPG4 and SPG3A families in Brazil. Considering the possibility of CNVs detection by specific algorithms with MPS data, we consider that this is likely the most cost-effective approach to investigate CNVs in these genes in low-risk populations, with MLPA being reserved as an orthogonal confirmatory test.
    MeSH term(s) Humans ; Brazil/epidemiology ; Cohort Studies ; DNA Copy Number Variations/genetics ; Mutation ; Proteins/genetics ; Spastic Paraplegia, Hereditary/epidemiology ; Spastic Paraplegia, Hereditary/genetics ; Spastic Paraplegia, Hereditary/diagnosis ; Spastin/genetics
    Chemical Substances Proteins ; SPAST protein, human (EC 5.6.1.1) ; Spastin (EC 3.6.4.3) ; SPG11 protein, human
    Language English
    Publishing date 2023-01-15
    Publishing country Denmark
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 221209-2
    ISSN 1399-0004 ; 0009-9163
    ISSN (online) 1399-0004
    ISSN 0009-9163
    DOI 10.1111/cge.14280
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Detection of Mosaic Variants in Mothers of MPS II Patients by Next Generation Sequencing.

    Oliveira Netto, Alice Brinckmann / Brusius-Facchin, Ana Carolina / Leistner-Segal, Sandra / Kubaski, Francyne / Josahkian, Juliana / Giugliani, Roberto

    Frontiers in molecular biosciences

    2021  Volume 8, Page(s) 789350

    Abstract: Mucopolysaccharidosis type II is an X-linked lysosomal storage disorder caused by mutations in ... ...

    Abstract Mucopolysaccharidosis type II is an X-linked lysosomal storage disorder caused by mutations in the
    Language English
    Publishing date 2021-11-05
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2814330-9
    ISSN 2296-889X
    ISSN 2296-889X
    DOI 10.3389/fmolb.2021.789350
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: A novel DMD intronic alteration: a potentially disease-causing variant of an intermediate muscular dystrophy phenotype.

    Santin, Ricardo / Vieira, Igor Araujo / Nunes, Jean Costa / Benevides, Maria Luiza / Quadros, Fernanda / Brusius-Facchin, Ana Carolina / Macedo, Gabriel / Bertoni, Ana Paula Santin

    Acta myologica : myopathies and cardiomyopathies : official journal of the Mediterranean Society of Myology

    2021  Volume 40, Issue 2, Page(s) 93–100

    Abstract: Pathogenic germline variants ... ...

    Abstract Pathogenic germline variants in
    MeSH term(s) Dystrophin/genetics ; Genetic Testing ; Humans ; Introns/genetics ; Muscular Dystrophy, Duchenne/genetics ; Mutation ; Phenotype
    Chemical Substances Dystrophin
    Language English
    Publishing date 2021-06-30
    Publishing country Italy
    Document type Case Reports
    ZDB-ID 2102328-1
    ISSN 2532-1900 ; 1128-2460
    ISSN (online) 2532-1900
    ISSN 1128-2460
    DOI 10.36185/2532-1900-048
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: Gene-environment interactions and preterm birth predictors: A Bayesian network approach.

    Elias, Dario E / Santos, Maria R / Campaña, Hebe / Poletta, Fernando A / Heisecke, Silvina L / Gili, Juan A / Ratowiecki, Julia / Cosentino, Viviana R / Uranga, Rocio / Málaga, Diana Rojas / Oliveira Netto, Alice Brinckmann / Brusius-Facchin, Ana Carolina / Saleme, César / Rittler, Mónica / Krupitzki, Hugo B / Camelo, Jorge S Lopez / Gimenez, Lucas G

    Genetics and molecular biology

    2024  Volume 46, Issue 4, Page(s) e20230090

    Abstract: Preterm birth (PTB) is the main condition related to perinatal morbimortality worldwide. The aim of this study was to identify gene-environment interactions associated with spontaneous PTB or its predictors. We carried out a retrospective case-control ... ...

    Abstract Preterm birth (PTB) is the main condition related to perinatal morbimortality worldwide. The aim of this study was to identify gene-environment interactions associated with spontaneous PTB or its predictors. We carried out a retrospective case-control study including parental sociodemographic and obstetric data as well as newborn genetic variants of 69 preterm and 61 at term newborns born at a maternity hospital from Tucumán, Argentina, between 2005 and 2010. A data-driven Bayesian network including the main PTB predictors was created where we identified gene-environment interactions. We used logistic regressions to calculate the odds ratios and confidence intervals of the interactions. From the main PTB predictors (nine exposures and six genetic variants) we identified an interaction between low neighbourhood socioeconomic status and rs2074351 (PON1, genotype GG) variant that was associated with an increased risk of toxoplasmosis (odds ratio 12.51, confidence interval 95%: 1.71 - 91.36). The results of this exploratory study suggest that structural social disparities could influence the PTB risk by increasing the frequency of exposures that potentiate the risk associated with individual characteristics such as genetic traits. Future studies with larger sample sizes are necessary to confirm these findings.
    Language English
    Publishing date 2024-01-19
    Publishing country Brazil
    Document type Journal Article
    ZDB-ID 1445712-x
    ISSN 1678-4685 ; 1415-4757
    ISSN (online) 1678-4685
    ISSN 1415-4757
    DOI 10.1590/1678-4685-GMB-2023-0090
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  7. Article ; Online: Diagnostic yield of targeted sequential and massive panel approaches for inherited neuropathies.

    Padilha, Janice Pacheco Dias / Brasil, Carolina Serpa / Hoefel, Alice Maria Luderitz / Winckler, Pablo Brea / Donis, Karina Carvalho / Brusius-Facchin, Ana Carolina / Saute, Jonas Alex Morales

    Clinical genetics

    2020  Volume 98, Issue 2, Page(s) 185–190

    Abstract: Diagnostic yield of genetic studies for Charcot-Marie-Tooth disease (CMT) is little known, with a lack of epidemiological data to build better diagnostic strategies outside the United States and Europe. We aimed to evaluate the performance of two ... ...

    Abstract Diagnostic yield of genetic studies for Charcot-Marie-Tooth disease (CMT) is little known, with a lack of epidemiological data to build better diagnostic strategies outside the United States and Europe. We aimed to evaluate the performance of two molecular diagnostic strategies for patients with CMT, and to characterize epidemiological findings of these conditions in southern Brazil. We performed a single-center cross-sectional study, in which 94 patients (55 families) with CMT suspicion were evaluated. Overall, the diagnostic yield of the combined strategy of Multiplex-ligation-dependent-probe-amplification (MLPA) of PMP22/GJB1/MPZ and GJB1/MPZ/PMP22 Sanger sequencing was 63.6% (28/44) for index cases with demyelinating/intermediate CMT suspicion (21 CMT1A-PMP22, 5 CMTX1-GJB1 and 2 with probably CMT1B-MPZ diagnosis). Five of the 11 index cases (45.4%) with axonal CMT had at least a possible diagnosis with next generation sequencing (NGS) panel of 104 inherited neuropathies-related genes (one each with CMT1A-PMP22, CMT2A-MFN2, CMT2K-GDAP1, CMT2U-MARS, CMT2W-HARS1). Detailed clinical, neurophysiological and molecular data of families are provided. Sequential molecular diagnosis strategies with MLPA plus target Sanger sequencing for demyelinating/intermediate CMT had high diagnostic yield, and almost half of axonal CMT families had at least a possible diagnosis with the comprehensive NGS panel. Most frequent subtypes of CMT in our region are CMT1A-PMP22 and CMTX1-GJB1.
    MeSH term(s) Adult ; Brazil/epidemiology ; Charcot-Marie-Tooth Disease/classification ; Charcot-Marie-Tooth Disease/diagnosis ; Charcot-Marie-Tooth Disease/epidemiology ; Charcot-Marie-Tooth Disease/genetics ; Connexins/genetics ; Female ; Humans ; Male ; Multiplex Polymerase Chain Reaction/methods ; Mutation ; Myelin P0 Protein/genetics ; Myelin Proteins/genetics ; Pathology, Molecular/methods ; Sequence Analysis, DNA ; Gap Junction beta-1 Protein
    Chemical Substances Connexins ; MPZ protein, human ; Myelin P0 Protein ; Myelin Proteins ; PMP22 protein, human
    Language English
    Publishing date 2020-06-29
    Publishing country Denmark
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 221209-2
    ISSN 1399-0004 ; 0009-9163
    ISSN (online) 1399-0004
    ISSN 0009-9163
    DOI 10.1111/cge.13793
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Recent advances in molecular testing to improve early diagnosis in children with mucopolysaccharidoses.

    Brusius-Facchin, Ana Carolina / Rojas Malaga, Diana / Leistner-Segal, Sandra / Giugliani, Roberto

    Expert review of molecular diagnostics

    2018  Volume 18, Issue 10, Page(s) 855–866

    Abstract: Introduction: The mucopolysaccharidoses (MPS) are a group of lysosomal storage disorders with high phenotypic and genotypic heterogeneity, making precise diagnosis challenging. Although enzyme activity assay is considered the gold standard for the ... ...

    Abstract Introduction: The mucopolysaccharidoses (MPS) are a group of lysosomal storage disorders with high phenotypic and genotypic heterogeneity, making precise diagnosis challenging. Although enzyme activity assay is considered the gold standard for the diagnosis of these disorders, molecular testing can greatly refine this task. New methods for rapid detection of variants are useful to reduce the 'diagnostic odyssey' faced by patients and their family, to lead to appropriate genetic counseling and to select the most appropriate therapy for each case. Areas covered: We review and discuss the advantages, disadvantages and limitations of the modern technologies in the field of molecular diagnosis of MPS, presenting our own experience. Expert commentary: While current molecular genetics testing for MPS mostly relies on PCR and Sanger sequencing, promising alternative techniques have emerged over the last few years, and its application into routine clinical practice is gaining momentum.
    MeSH term(s) Biomarkers ; Child ; DNA Mutational Analysis/methods ; Early Diagnosis ; Genetic Testing ; Genomics/methods ; Humans ; Infant, Newborn ; Molecular Diagnostic Techniques ; Mucopolysaccharidoses/diagnosis ; Mucopolysaccharidoses/etiology ; Mucopolysaccharidoses/metabolism ; Mutation ; Neonatal Screening/methods
    Chemical Substances Biomarkers
    Language English
    Publishing date 2018-09-26
    Publishing country England
    Document type Journal Article ; Review
    ZDB-ID 2112530-2
    ISSN 1744-8352 ; 1473-7159
    ISSN (online) 1744-8352
    ISSN 1473-7159
    DOI 10.1080/14737159.2018.1523722
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  9. Article: Genes, exposures, and interactions on preterm birth risk: an exploratory study in an Argentine population.

    Elias, Dario E / Santos, Maria R / Campaña, Hebe / Poletta, Fernando A / Heisecke, Silvina L / Gili, Juan A / Ratowiecki, Julia / Cosentino, Viviana / Uranga, Rocio / Málaga, Diana Rojas / Netto, Alice Brinckmann Oliveira / Brusius-Facchin, Ana Carolina / Saleme, César / Rittler, Mónica / Krupitzki, Hugo B / Camelo, Jorge S Lopez / Gimenez, Lucas G

    Journal of community genetics

    2022  Volume 13, Issue 6, Page(s) 557–565

    Abstract: Preterm birth (PTB) is the main condition related to perinatal morbimortality worldwide. The aim of this study was to identify associations of spontaneous PTB with genetic variants, exposures, and interactions between and within them. We carried out a ... ...

    Abstract Preterm birth (PTB) is the main condition related to perinatal morbimortality worldwide. The aim of this study was to identify associations of spontaneous PTB with genetic variants, exposures, and interactions between and within them. We carried out a retrospective case-control study including parental sociodemographic and obstetric data, and fetal genetic variants. We sequenced the coding and flanking regions of five candidate genes from the placental blood cord of 69 preterm newborns and 61 at term newborns. We identify the characteristics with the greatest predictive power of PTB using penalized regressions, in which we include exposures (E), genetic variants (G), and two-way interactions. Few prenatal visits (< 5) was the main predictor of PTB from 26 G, 35 E, 299 G × G, 564 E × E, and 875 G × E evaluated terms. Within the fetal genetic characteristics, we observed associations of rs4845397 (KCNN3, allele T) variant; G × G interaction between rs12621551 (COL4A3, allele T) and rs73993878 (COL4A3, allele A), which showed sensitivity to anemia; and G × G interaction between rs11680670 (COL4A3, allele T) and rs2074351 (PON1, allele A), which showed sensitivity to vaginal discharge. The results of this exploratory study suggest that social disparities and metabolic pathways linked to uterine relaxation, inflammation/infections, and collagen metabolism would be involved in PTB etiology. Future studies with a larger sample size are necessary to confirm these findings and to analyze a greater number of exposures.
    Language English
    Publishing date 2022-08-17
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 2543127-4
    ISSN 1868-6001 ; 1868-310X
    ISSN (online) 1868-6001
    ISSN 1868-310X
    DOI 10.1007/s12687-022-00605-z
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Experience of the NPC Brazil Network with a Comprehensive Program for the Screening and Diagnosis of Niemann-Pick Disease Type C.

    Kubaski, Francyne / Burlina, Alberto / Polo, Giulia / Pereira, Danilo / Herbst, Zackary M / Silva, Camilo / Trapp, Franciele B / Michelin-Tirelli, Kristiane / Lopes, Franciele F / Burin, Maira G / Brusius-Facchin, Ana Carolina / Netto, Alice B O / Faqueti, Larissa / Iop, Gabrielle D / Poletto, Edina / Giugliani, Roberto

    International journal of neonatal screening

    2022  Volume 8, Issue 3

    Abstract: Niemann-Pick disease type C (NPC) is a lysosomal disorder caused by impaired cholesterol metabolism. Levels of lysosphingomyelin 509 (LysoSM509) have been shown elevated in dried blood spots (DBS) of NPC and acid sphingomyelinase deficiency patients. In ... ...

    Abstract Niemann-Pick disease type C (NPC) is a lysosomal disorder caused by impaired cholesterol metabolism. Levels of lysosphingomyelin 509 (LysoSM509) have been shown elevated in dried blood spots (DBS) of NPC and acid sphingomyelinase deficiency patients. In this study, we report our experience using a two-tier approach (1st tier is the quantification of lysoSM509 by ultra-performance liquid chromatography tandem mass spectrometry followed by the 2nd tier with next-generation sequencing of the
    Language English
    Publishing date 2022-06-28
    Publishing country Switzerland
    Document type Journal Article
    ISSN 2409-515X
    ISSN (online) 2409-515X
    DOI 10.3390/ijns8030039
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