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  1. Article ; Online: Physiological, molecular, and genetic mechanism of action of the biostimulant Quantis™ for increased thermotolerance of potato (Solanum tuberosum L.)

    Dasuni P. Jayaweera / Charlene Dambire / Dimitra Angelopoulou / Sergi Munné-Bosch / Ranjan Swarup / Rumiana V. Ray

    Chemical and Biological Technologies in Agriculture, Vol 11, Iss 1, Pp 1-

    2024  Volume 19

    Abstract: Abstract Background Raising global temperatures limit crop productivity and new strategies are needed to improve the resilience of thermosensitive crops such as potato (Solanum tuberosum L.). Biostimulants are emerging as potential crop protection ... ...

    Abstract Abstract Background Raising global temperatures limit crop productivity and new strategies are needed to improve the resilience of thermosensitive crops such as potato (Solanum tuberosum L.). Biostimulants are emerging as potential crop protection products against environmental stress, however their mechanism of action remains largely unknown, hindering their wider adoption. We used comprehensive physiological, molecular, and mass spectrometry approaches to develop understanding of the mechanism of plant thermotolerance exerted by the biostimulant, Quantis™, under heat stress. Using orthologues gene mutations in Arabidopsis thaliana we report heat-defence genes, modified by Quantis™, which were also investigated for potential overlapping functions in biotic stress defence to Sclerotinia sclerotiorum and Rhizoctonia solani. Results Quantis™ enhanced PSII photochemical efficiency and decreased thermal dissipation of potato grown under heat stress. These effects were associated with upregulation of genes with antioxidant function, including PR10, flavonoid 3′‐hydroxylase and β-glucosidases, and modulation of abscisic acid (ABA) and cytokinin (CK) activity in leaves by Quantis™. The biostimulant modulated the expression of the heat-defence genes, PEN1, PR4 or MEE59, with functions in leaf photoprotection and root thermal protection, but with no overlapping function in biotic stress defence. Protective root growth under heat stress, following the biostimulant application, was correlated with enhanced CK signalling in roots. Increased endogenous concentrations of ABA and CK in potato leaves and significant upregulation of StFKF1 were consistent with tuberisation promoting effects. Quantis™ application resulted in 4% tuber weight increase and 40% larger tuber size thus mitigating negative effects of heat stress on tuber growth. Conclusions Quantis™ application prior to heat stress effectively primed heat tolerance responses and alleviated temperature stress of S. tuberosum L. and A. thaliana by modulating the ...
    Keywords Solanum tuberosum ; Biostimulant ; Thermotolerance ; Abscisic acid ; Cytokinins ; Gibberellins ; Agriculture ; S
    Subject code 580
    Language English
    Publishing date 2024-01-01T00:00:00Z
    Publisher SpringerOpen
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  2. Article ; Online: A Yeast-Based Functional Assay to Study Plant N-Degron – N-Recognin Interactions

    Aida Kozlic / Nikola Winter / Theresia Telser / Jakob Reimann / Katrin Rose / Lilian Nehlin / Sophie Berckhan / Gunjan Sharma / Charlene Dambire / Tinne Boeckx / Michael J. Holdsworth / Andreas Bachmair

    Frontiers in Plant Science, Vol

    2022  Volume 12

    Abstract: The N-degron pathway is a branch of the ubiquitin-proteasome system where amino-terminal residues serve as degradation signals. In a synthetic biology approach, we expressed ubiquitin ligase PRT6 and ubiquitin conjugating enzyme 2 (AtUBC2) from ... ...

    Abstract The N-degron pathway is a branch of the ubiquitin-proteasome system where amino-terminal residues serve as degradation signals. In a synthetic biology approach, we expressed ubiquitin ligase PRT6 and ubiquitin conjugating enzyme 2 (AtUBC2) from Arabidopsis thaliana in a Saccharomyces cerevisiae strain with mutation in its endogenous N-degron pathway. The two enzymes re-constitute part of the plant N-degron pathway and were probed by monitoring the stability of co-expressed GFP-linked plant proteins starting with Arginine N-degrons. The novel assay allows for straightforward analysis, whereas in vitro interaction assays often do not allow detection of the weak binding of N-degron recognizing ubiquitin ligases to their substrates, and in planta testing is usually complex and time-consuming.
    Keywords synthetic biology ; ubiquitin-dependent proteolysis ; N-degron pathway ; yeast-based assay ; PRT6 ; N-recognin ; Plant culture ; SB1-1110
    Language English
    Publishing date 2022-01-01T00:00:00Z
    Publisher Frontiers Media S.A.
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  3. Article: Unmasking alpha diversity, cladogenesis and biogeographical patterning in an ancient panarthropod lineage (Onychophora: Peripatopsidae: Opisthopatus cinctipes) with the description of five novel species

    Daniels, Savel R / Charlene Dambire / Sebastian Klaus / Prashant P. Sharma

    Cladistics. 2016 Oct., v. 32, no. 5

    2016  

    Abstract: Speciation and biogeographical patterning in the velvet worm Opisthopatus cinctipes was examined under a null hypothesis that numerous discrete lineages are nested within the species. A total of 184 O. cinctipes specimens, together with a single ... ...

    Abstract Speciation and biogeographical patterning in the velvet worm Opisthopatus cinctipes was examined under a null hypothesis that numerous discrete lineages are nested within the species. A total of 184 O. cinctipes specimens, together with a single specimen of each of the two congeneric point endemic sister species (O. roseus and O. herbertorum), were collected throughout the forest archipelago in the Eastern Cape, KwaZulu‐Natal and Mpumalanga provinces of South Africa. All specimens were sequenced for two partial mitochondrial DNA loci (COI and 12S rRNA), while a single specimen from each locality was sequenced for the nuclear 18S rRNA locus. Evolutionary relationships were assessed using maximum‐likelihood and Bayesian inferences, while divergence time estimations were conducted using BEAST. A Bayesian species delimitation approach was undertaken to explore the number of possible novel lineages nested within Opisthopatus, while population genetic structure was examined for the COI locus using ARLEQUIN. Phylogenetic results revealed that O. cinctipes is a species complex comprising seven geographically discrete and statistically well‐supported clades. An independent statistical approach to species delimitations circumscribed ca. 67 species. Results from divergence time estimation and rate constancy tests revealed near constant net diversification occurring throughout the Eocene and Oligocene with subdivision of ranges during the Miocene. Gross morphological characters such as leg pair number within O. cinctipes were invariant, while dorsal and ventral integument colour was highly polymorphic. However, scanning electron microscopy revealed considerable differences both between and within clades. The caveats associated with both morphological and algorithmic delineation of species boundaries are discussed. The five novel Opisthopatus species are described.
    Keywords Bayesian theory ; Peripatopsidae ; biogeography ; color ; forests ; integument ; loci ; mitochondrial DNA ; phylogeny ; ribosomal RNA ; scanning electron microscopy ; species diversity ; statistical analysis ; South Africa
    Language English
    Dates of publication 2016-10
    Size p. 506-537.
    Publishing place John Wiley & Sons, Ltd
    Document type Article
    Note JOURNAL ARTICLE
    ZDB-ID 1462608-1
    ISSN 1096-0031 ; 0748-3007
    ISSN (online) 1096-0031
    ISSN 0748-3007
    DOI 10.1111/cla.12154
    Database NAL-Catalogue (AGRICOLA)

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  4. Article ; Online: Oxygen-dependent proteolysis regulates the stability of angiosperm polycomb repressive complex 2 subunit VERNALIZATION 2

    Daniel J. Gibbs / Hannah M. Tedds / Anne-Marie Labandera / Mark Bailey / Mark D. White / Sjon Hartman / Colleen Sprigg / Sophie L. Mogg / Rory Osborne / Charlene Dambire / Tinne Boeckx / Zachary Paling / Laurentius A. C. J. Voesenek / Emily Flashman / Michael J. Holdsworth

    Nature Communications, Vol 9, Iss 1, Pp 1-

    2018  Volume 11

    Abstract: VRN2 is a Polycomb Repressive Complex 2 subunit, best known as a regulator of vernalization that accumulates during prolonged cold. Here Gibbs et al. show that VRN2 is degraded via the N-end rule pathway, which prevents ectopic accumulation of VRN2 in ... ...

    Abstract VRN2 is a Polycomb Repressive Complex 2 subunit, best known as a regulator of vernalization that accumulates during prolonged cold. Here Gibbs et al. show that VRN2 is degraded via the N-end rule pathway, which prevents ectopic accumulation of VRN2 in the absence of appropriate environmental stimuli.
    Keywords Science ; Q
    Language English
    Publishing date 2018-12-01T00:00:00Z
    Publisher Nature Portfolio
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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