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Article ; Online: Inhibin A contributes to the tumorigenesis of oral squamous cell carcinoma by KIAA1429-mediated m6A modification.

Chen, Xiaoqing / Fan, Renxiu

Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology

2024 Volume 53, Issue 4, Page(s) 266–274

Abstract: Background: Inhibin A and N6-methyladenosine methylation modifications participate in oral squamous cell carcinoma development. However, the N6-methyladenosine modification of Inhibin A in oral squamous cell carcinoma has not been revealed. This study ... ...

Abstract	Background: Inhibin A and N6-methyladenosine methylation modifications participate in oral squamous cell carcinoma development. However, the N6-methyladenosine modification of Inhibin A in oral squamous cell carcinoma has not been revealed. This study reveals a key gene "Inhibin A" that may affect the tumorigenesis of oral squamous cell carcinoma and its molecular mechanisms on N6-methyladenosine methyltransferase KIAA1429-mediated N6-methyladenosine methylation modification. Methods: Bioinformatics analysis and quantitative real-time polymerase chain reaction identified the potential regulatory genes in oral squamous cell carcinoma. We examined the changes in the proliferation (Cell Counting Kit-8 assay), migration (transwell migration assay), and invasion (transwell invasion assays) of oral squamous cell carcinoma cells. We performed a xenograft tumor experiment to validate the role of Inhibin A in oral squamous cell carcinoma in vivo. The interactions between Inhibin A and KIAA1429 were analyzed using bioinformatics, methylated RNA immunoprecipitation-qPCR, quantitative real-time polymerase chain reaction, and Western blotting experiments. Results: Inhibin A had the highest expression in patients with oral squamous cell carcinoma. Inhibin A silencing impaired the ability of oral squamous cell carcinoma cells to proliferate, migrate, and invade, as well as limited the tumorous growth of oral squamous cell carcinoma cells in vivo. Bioinformatics analysis showed that Inhibin A expression positively interacted with KIAA1429 expression in The Cancer Genome Atlas database. The levels were also upregulated in our clinical samples. Furthermore, KIAA1429 silencing repressed the N6-methyladenosine level of Inhibin A in oral squamous cell carcinoma. Conclusions: Inhibin A promotes the tumorigenesis of oral squamous cell carcinoma by KIAA1429-mediated N6-methyladenosine modification. This study adds to our current knowledge of the molecular mechanisms underlying oral squamous cell carcinoma malignancy.
MeSH term(s)	Humans ; Adenine ; Carcinogenesis/genetics ; Carcinoma, Squamous Cell/genetics ; Cell Transformation, Neoplastic ; Head and Neck Neoplasms ; Inhibins/metabolism ; Mouth Neoplasms/genetics ; Squamous Cell Carcinoma of Head and Neck
Chemical Substances	6-methyladenine ; Adenine (JAC85A2161) ; inhibin A ; inhibin beta A subunit ; Inhibins (57285-09-3) ; VIRMA protein, human
Language	English
Publishing date	2024-03-26
Publishing country	Denmark
Document type	Journal Article
ZDB-ID	1021270-x
ISSN	1600-0714 ; 0904-2512
ISSN (online)	1600-0714
ISSN	0904-2512
DOI	10.1111/jop.13531
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Article: Breastfeeding during the COVID-19 pandemic.

Chanda, Bwalya Mpelwa / Chen, Xiao-Qing

Frontiers in pediatrics

2023 Volume 11, Page(s) 1120763

Abstract: The coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused many significant changes to all aspects of day to day life. The disease has spread and reached pandemic proportions. The principle ... ...

Abstract	The coronavirus disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused many significant changes to all aspects of day to day life. The disease has spread and reached pandemic proportions. The principle route of transmission is the respiratory route. Infants, pregnant women and breastfeeding mothers have all been affected. Many interventions and guidelines from important societies have been instituted in order to curb the transmission of the disease. These have involved both pharmacological and non-pharmacological methods. COVID-19 vaccines have also emerged as important methods of primary prevention of the disease. But several questions have been raised concerning the safety and efficacy of their use in pregnant and breastfeeding mothers. It has also not been clear if the vaccines are effective in generating a robust immune response in the pregnant women and breastfeeding mothers to confer passive immunity to the fetuses and infants, respectively. And they have not been tested in infants. The aspect of infant feeding has equally been affected. Although breast milk has not been known to serve as the vehicle of transmission of the virus, there is still some lack of uniformity of practice regarding breastfeeding when a mother has SARS-CoV-2 infection. This has led to infant feeding being done by the use of commercial formula feeds, pasteurized human donor breast milk, feeding on the mother's own expressed breast milk by a care giver and directly breastfeeding with skin to skin contact. This is despite breast milk being the most physiologically appropriate type of feed for infants. Therefore the pertinent question remains; should breastfeeding continue during the pandemic continue? This review also seeks to analyse the vast amount of scientific information regarding the subject and to synthesize science-based information.
Language	English
Publishing date	2023-06-05
Publishing country	Switzerland
Document type	Journal Article ; Review
ZDB-ID	2711999-3
ISSN	2296-2360
ISSN	2296-2360
DOI	10.3389/fped.2023.1120763
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Article ; Online: Global Demographic Characteristics and Pathogen Spectrum of Tinea Capitis.

Chen, Xiao-Qing / Yu, Jin

Mycopathologia

2023 Volume 188, Issue 5, Page(s) 433–447

Abstract: Tinea capitis is an important superficial fungal infection with a global distribution. It mainly affects prepubertal children and is more common in males. Anthropophilic and zoophilic dermatophytes are responsible for most infections. The pathogen ... ...

Abstract	Tinea capitis is an important superficial fungal infection with a global distribution. It mainly affects prepubertal children and is more common in males. Anthropophilic and zoophilic dermatophytes are responsible for most infections. The pathogen spectrum of tinea capitis varies across different regions and changes over time, and is influenced by multiple factors, such as economic development, changes in lifestyle, immigration and animal distribution. This review aimed to clarify the demographic and etiological characteristics of tinea capitis worldwide and determine the common trends of causative pathogens. By mainly analyzing the literature published from 2015 to 2022, we found that the incidence and demographic characteristics of tinea capitis remained generally stable. Zoophilic Microsporum canis, anthropophilic Trichophyton violaceum and Trichophyton tonsurans were the predominant pathogens. The pathogen spectra in different countries changed in different directions. In some countries, the main pathogen shifted to an anthropophilic dermatophyte, such as T. tonsurans, Microsporum audouinii or T. violaceum; in contrast, it shifted to a zoophilic agent, such as M. canis, in some other countries. Dermatologists are advised to continue monitoring the pathogen spectrum and implement preventive measures according to the reported changes.
MeSH term(s)	Child ; Male ; Animals ; Humans ; Tinea Capitis/epidemiology ; Tinea Capitis/microbiology ; Microsporum ; Dermatomycoses ; Causality ; Incidence ; Trichophyton
Language	English
Publishing date	2023-04-03
Publishing country	Netherlands
Document type	Journal Article ; Review
ZDB-ID	391081-7
ISSN	1573-0832 ; 0369-299X ; 0301-486X ; 0027-5530
ISSN (online)	1573-0832
ISSN	0369-299X ; 0301-486X ; 0027-5530
DOI	10.1007/s11046-023-00710-8
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Ud II Zs.99: Show issues

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Article ; Online: ChatGPT in medicine: Evaluating psoriasis patient concerns.

Huang, Chunyan / Hong, Daorong / Chen, Xiaoqing

Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI)

2024 Volume 30, Issue 4, Page(s) e13680

Language	English
Publishing date	2024-04-01
Publishing country	England
Document type	Letter
ZDB-ID	1229160-2
ISSN	1600-0846 ; 0909-752X ; 1397-1344
ISSN (online)	1600-0846
ISSN	0909-752X ; 1397-1344
DOI	10.1111/srt.13680
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Zs.A 4278: Show issues

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Article ; Online: Alignment-Based Adversarial Training (ABAT) for Improving the Robustness and Accuracy of EEG-Based BCIs.

Chen, Xiaoqing / Wang, Ziwei / Wu, Dongrui

IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society

2024 Volume 32, Page(s) 1703–1714

Abstract: Machine learning has achieved great success in electroencephalogram (EEG) based brain-computer interfaces (BCIs). Most existing BCI studies focused on improving the decoding accuracy, with only a few considering the adversarial security. Although many ... ...

Abstract	Machine learning has achieved great success in electroencephalogram (EEG) based brain-computer interfaces (BCIs). Most existing BCI studies focused on improving the decoding accuracy, with only a few considering the adversarial security. Although many adversarial defense approaches have been proposed in other application domains such as computer vision, previous research showed that their direct extensions to BCIs degrade the classification accuracy on benign samples. This phenomenon greatly affects the applicability of adversarial defense approaches to EEG-based BCIs. To mitigate this problem, we propose alignment-based adversarial training (ABAT), which performs EEG data alignment before adversarial training. Data alignment aligns EEG trials from different domains to reduce their distribution discrepancies, and adversarial training further robustifies the classification boundary. The integration of data alignment and adversarial training can make the trained EEG classifiers simultaneously more accurate and more robust. Experiments on five EEG datasets from two different BCI paradigms (motor imagery classification, and event related potential recognition), three convolutional neural network classifiers (EEGNet, ShallowCNN and DeepCNN) and three different experimental settings (offline within-subject cross-block/-session classification, online cross-session classification, and pre-trained classifiers) demonstrated its effectiveness. It is very intriguing that adversarial attacks, which are usually used to damage BCI systems, can be used in ABAT to simultaneously improve the model accuracy and robustness.
MeSH term(s)	Brain-Computer Interfaces ; Electroencephalography/methods ; Humans ; Neural Networks, Computer ; Machine Learning ; Imagination/physiology ; Algorithms ; Evoked Potentials/physiology
Language	English
Publishing date	2024-04-29
Publishing country	United States
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	1166307-8
ISSN	1558-0210 ; 1063-6528 ; 1534-4320
ISSN (online)	1558-0210
ISSN	1063-6528 ; 1534-4320
DOI	10.1109/TNSRE.2024.3391936
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Zs.A 4726: Show issues

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Article ; Online: Erratum to “Inhibition of miR-21 improves pulmonary vascular responses in bronchopulmonary dysplasia by targeting the DDAH1/ADMA/NO pathway”

Zhong Ying / Zhang Zhiqun / Chen Xiaoqing

Open Medicine, Vol 18, Iss

2023 Volume 1

Keywords	Medicine ; R
Language	English
Publishing date	2023-03-01T00:00:00Z
Publisher	De Gruyter
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article ; Online: Identification of hub ferroptosis-related genes and immune infiltration in lupus nephritis using bioinformatics.

Hu, Weitao / Chen, Xiaoqing

Scientific reports

2022 Volume 12, Issue 1, Page(s) 18826

Abstract: Lupus nephritis (LN) is one of the most severe and more common organ manifestations of the autoimmune disease, systemic lupus erythematosus. Ferroptosis, a novel type of programmed cell death, so far its role in LN remains uncertain. In the present study, ...

Abstract	Lupus nephritis (LN) is one of the most severe and more common organ manifestations of the autoimmune disease, systemic lupus erythematosus. Ferroptosis, a novel type of programmed cell death, so far its role in LN remains uncertain. In the present study, we explored the role of ferroptosis in LN and its relationship with the immune response. The GSE112943 LN dataset was downloaded from the Gene Expression Omnibus database. Ferroptosis-Related Genes (FRGs) that drive, suppress or mark ferroptosis were retrieved from the public FerrDb database. The gene expression matrix of the GSE112943 dataset was analyzed with the "limma" package in R to obtain differentially expressed genes (DEGs) between LN and healthy samples. Subsequently, the crossover genes between DEGs and FRGs were identified as differentially expressed ferroptosis-related genes (DE-FRGs). Protein-protein interaction (PPI) network analysis, visualization, and identification of hub lupus nephritis ferroptosis-related genes (LN-FRGs) were performed with STRING and Cytoscape, while their Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were determined with the clusterProfiler package. Immune cell infiltration was calculated with CIBERSORT. The relationship between hub LN-FRGs and immune-infiltrated cells in LN was determined by Pearson correlation. A total of 96 DE-FRGs and 8 hub LN-FRGs (KRAS, PIK3CA, EGFR, MAPK14, SRC, MAPK3, VEGFA, and ATM) were identified. GO and KEGG functional classification indicated these genes enrichment in apoptotic process, programmed cell death, autophagy-animal, FoxO signaling pathway, relaxin signaling pathway, and VEGF signaling pathway. Infiltration matrix analysis of immune cells showed abundant Monocytes and M0/M1/M2 macrophages in LN kidney tissues. Correlation analysis revealed 8 hub LN-FRGs associated with immune-infiltrated cells in LN. In summary, overproduction of ROS and abnormal infiltration of immune cells would be implicated in the LN caused by ferroptosis. 8 hub lupus nephritis ferroptosis-related genes (LN-FRGs) which might be good biomarkers of ferroptosis in LN were identified in this study. These findings point to the immune response playing an important role in LN caused by ferroptosis via mutual regulation between hub LN-FRGs and immune-infiltrated cells.
MeSH term(s)	Humans ; Computational Biology ; Lupus Nephritis/genetics ; Ferroptosis/genetics ; Gene Ontology ; Protein Interaction Maps/genetics
Language	English
Publishing date	2022-11-05
Publishing country	England
Document type	Journal Article
ZDB-ID	2615211-3
ISSN	2045-2322 ; 2045-2322
ISSN (online)	2045-2322
ISSN	2045-2322
DOI	10.1038/s41598-022-23730-8
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Article ; Online: Au/Pt@ZIF-90 Nanoenzyme Capsule-Based "Explosive" Signal Amplifier for "All-in-Tube" POCT.

Liu, Wei / Yao, Yao / Liu, Qi / Chen, Xiao-Qing

Analytical chemistry

2024 Volume 96, Issue 3, Page(s) 1362–1370

Abstract: The sensitive, convenient, and visual detection of low-concentration disease markers in biological samples has always been a priority in disease diagnosis. However, existing research has been problematic due to complex operation and unsatisfactory ... ...

Abstract	The sensitive, convenient, and visual detection of low-concentration disease markers in biological samples has always been a priority in disease diagnosis. However, existing research has been problematic due to complex operation and unsatisfactory sensitivity. Consequently, an "explosive" signal amplification platform based on Au/Pt@ZIF-90 was developed for sensitive visual detection of disease markers. In this study, a controllable and explosively released Au/Pt nanoparticles (NPs) "nanoenzyme capsule" was prepared by encapsulating Au/Pt NPs with excellent peroxidase activity in ZIF-90. This was achieved by adjusting the particle size of ZIF-90 and the encapsulation amount of Au/Pt NPs. Using the prepared capsules as the signal output module and aptamer as the target recognition module, an "All-in-Tube" portable point-of-care (POC) platform was constructed by integrating the Au/Pt@ZIF-90/filter paper and TMB/strips into an Eppendorf (EP) tube. By utilizing specific competitive binding of targets to aptamers, the platform enabled the sensitive and convenient measurement of small molecular disease markers. Taking adenosine as the proof of concept, the portable detection achieved excellent sensitivity. Moreover, the platform can achieve universal detection of various targets by varying the aptamer sequence. This signal amplification strategy provides a design pattern for the detection of low-concentration targets in biological samples and holds significant potential in the fields of disease diagnosis and environmental monitoring.
MeSH term(s)	Metal Nanoparticles/chemistry ; Gold/chemistry ; Aptamers, Nucleotide/chemistry ; Adenosine ; Biosensing Techniques ; Limit of Detection ; Metal-Organic Frameworks ; Nanoparticles
Chemical Substances	ZIF-90 ; Gold (7440-57-5) ; Aptamers, Nucleotide ; Adenosine (K72T3FS567) ; Metal-Organic Frameworks
Language	English
Publishing date	2024-01-10
Publishing country	United States
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	1508-8
ISSN	1520-6882 ; 0003-2700
ISSN (online)	1520-6882
ISSN	0003-2700
DOI	10.1021/acs.analchem.3c05077
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Zs.A 4033: Show issues

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Article ; Online: Inhibition of FoxO1 alleviates polycystic ovarian syndrome by reducing inflammation and the immune response.

Huang, Xiaolan / Luo, Xiangmin / Huang, Suzhen / Chen, Xiaoqing / Qiu, Lingling

Functional & integrative genomics

2024 Volume 24, Issue 1, Page(s) 6

Abstract: The aim of this study was to explore the role of forkhead box transcription Factor O1 (FoxO1) in chronic inflammation in polycystic ovary syndrome (PCOS). A PCOS rat model was constructed as an in vivo model by letrozole induction, and granulosa cells ( ... ...

Abstract	The aim of this study was to explore the role of forkhead box transcription Factor O1 (FoxO1) in chronic inflammation in polycystic ovary syndrome (PCOS). A PCOS rat model was constructed as an in vivo model by letrozole induction, and granulosa cells (GCs) from PCOS rats were isolated and cultured as an in vitro cellular model. FoxO1 was knocked down by shRNA and siRNA in the PCOS rat model and GCs model, respectively. H&E staining was conducted to evaluate the effect of FoxO1 inhibition on ovarian pathology and dysfunction in PCOS rats. The levels of inflammatory cytokines in the ovaries and uterus of PCOS rats and in GCs were assessed by ELISA. Flow cytometry was used to evaluate the changes in the contents of neutrophils and macrophages in the peripheral blood and spleen of PCOS rats. CCK-8 assays and Annexin V-FITC/PI staining were performed to evaluate the proliferation and apoptosis of GCs. The expression of genes and proteins related to the TLR4/NF-κB/NLRP3 pathway in GCs was determined by RT-qPCR and Western blotting. The results indicated that FoxO1 was highly expressed in PCOS rat model. Inhibition of FoxO1 significantly mitigated the pathological changes and dysfunction in the ovaries of PCOS rats while also suppressing inflammation and fibrosis in the ovaries and uterus. Moreover, knocking down FoxO1 facilitated the restoration of the normal ratio of neutrophils and macrophages in the peripheral blood and spleen of PCOS rats and promoted M2 polarization of macrophages. Additionally, inhibition of FoxO1 promoted the proliferation of GCs and inhibited the inflammatory response in GCs. Furthermore, FoxO1 knockdown inhibited the activation of the NF-κB pathway and the formation of the NLRP3 inflammasome in GCs. In conclusion, inhibition of FoxO1 can alleviate PCOS by inhibiting the TLR4/NF-κB/NLRP3 pathway to reduce inflammation and the immune response.
MeSH term(s)	Animals ; Female ; Rats ; Immunity ; NF-kappa B ; NLR Family, Pyrin Domain-Containing 3 Protein ; Polycystic Ovary Syndrome/genetics ; Toll-Like Receptor 4 ; Forkhead Box Protein O1/genetics ; Gene Knockdown Techniques
Chemical Substances	NF-kappa B ; NLR Family, Pyrin Domain-Containing 3 Protein ; Toll-Like Receptor 4 ; Foxo1 protein, rat ; Forkhead Box Protein O1
Language	English
Publishing date	2024-01-08
Publishing country	Germany
Document type	Journal Article
ZDB-ID	2014670-X
ISSN	1438-7948 ; 1438-793X
ISSN (online)	1438-7948
ISSN	1438-793X
DOI	10.1007/s10142-024-01284-4
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Zs.A 5230: Show issues

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Article: ZC3H13 Enhances the Malignancy of Cervical Cancer by Regulating m6A Modification of CKAP2.

Zhang, Yuan / Chen, Xiaoqing / Chen, Huiqun / Zhang, Ying

Critical reviews in immunology

2023 Volume 43, Issue 6, Page(s) 1–13

Abstract: Sustained expression of zinc finger CCCH-type containing 13 (ZC3H13) in tumors is essential for cancer cell malignancy; however, our understanding of its clinical effects and mechanisms in cervical cancer (CC) is limited. In this study, we aimed to ... ...

Abstract	Sustained expression of zinc finger CCCH-type containing 13 (ZC3H13) in tumors is essential for cancer cell malignancy; however, our understanding of its clinical effects and mechanisms in cervical cancer (CC) is limited. In this study, we aimed to reveal the effect on CC progression of ZC3H13-mediated N6-methyladenosine (m6A) modification to stabilize cytoskeleton-associated protein 2 (CKAP2) expression. CC tissues and paired adjacent normal tissues were collected from 50 patients. qRT-PCR was used to clarify ZC3H13 and CKAP2 expression levels in the CC tissues. The functional roles of ZC3H13 and CKAP2 in CC were analyzed by detecting the changes in CC cell proliferation, migration, invasion, and tumor growth in vivo. The regulatory relationship between ZC3H13 and CKAP2 was investigated by confirming m6A modification levels and their expression correlation. ZC3H13 and CKAP2 were highly expressed in CC and linked with poor prognosis. We observed that ZC3H13 inhibition decreased CC cell proliferation, invasion, and migration, while its facilitation promoted CC cell malignancy. ZC3H13 mediated m6A modification of CKAP2 to enhance CKAP2 expression in CC cells. Furthermore, CKAP2 overexpression partially restored the malignant phenotypic promotion induced by ZC3H13 overexpression in CC cells. In summary, this study revealed that ZC3H13-mediating m6A modification of CKAP2 promotes CC development. This finding should be conducive to an understanding of the role of ZC3H13-m6A-CKAP2 in CC and should provide an effective therapeutic target for this cancer.
MeSH term(s)	Humans ; Female ; Uterine Cervical Neoplasms/genetics ; Adenosine ; Cell Proliferation ; Cytoskeletal Proteins ; Nuclear Proteins ; RNA-Binding Proteins
Chemical Substances	Adenosine (K72T3FS567) ; CKAP2 protein, human ; Cytoskeletal Proteins ; ZC3H13 protein, human ; Nuclear Proteins ; RNA-Binding Proteins
Language	English
Publishing date	2023-11-09
Publishing country	United States
Document type	Journal Article
ZDB-ID	1353116-5
ISSN	1040-8401
ISSN	1040-8401
DOI	10.1615/CritRevImmunol.2023049342
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