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  1. Article ; Online: A gauge of coral physiology: re-examining temporal changes in

    Chuang, Po-Shun / Yu, Sheng-Ping / Liu, Po-Yu / Hsu, Ming-Tsung / Chiou, Yu-Jing / Lu, Chih-Ying / Tang, Sen-Lin

    ISME communications

    2024  Volume 4, Issue 1, Page(s) ycae001

    Abstract: Bacteria contribute to many physiological functions of coral holobionts, including responses to bleaching. The bacterial genus, ...

    Abstract Bacteria contribute to many physiological functions of coral holobionts, including responses to bleaching. The bacterial genus,
    Language English
    Publishing date 2024-01-12
    Publishing country England
    Document type Journal Article
    ISSN 2730-6151
    ISSN (online) 2730-6151
    DOI 10.1093/ismeco/ycae001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: High-Quality Genome Sequences of Two Octocoral-Associated Bacteria, Endozoicomonas euniceicola EF212

    Chiou, Yu-Jing / Chen, Yu-Hsiang / Chiang, Pei-Wen / Chen, Hsing-Ju / Tang, Sen-Lin

    Microbiology resource announcements

    2022  Volume 12, Issue 1, Page(s) e0087722

    Abstract: Endozoicomonas euniceicola ... ...

    Abstract Endozoicomonas euniceicola EF212
    Language English
    Publishing date 2022-12-21
    Publishing country United States
    Document type Journal Article
    ISSN 2576-098X
    ISSN (online) 2576-098X
    DOI 10.1128/mra.00877-22
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Similar but different: Characterization of

    Chiou, Yu-Jing / Chan, Ya-Fan / Yu, Sheng-Ping / Lu, Chih-Ying / Hsiao, Silver Sung-Yun / Chiang, Pei-Wen / Hsu, Ting-Chang / Liu, Po-Yu / Wada, Naohisa / Lee, Yu / Jane, Wann-Neng / Lee, Der-Chuen / Huang, Yu-Wen / Tang, Sen-Lin

    Science advances

    2023  Volume 9, Issue 47, Page(s) eadk1910

    Abstract: ... ...

    Abstract Endozoicomonas
    MeSH term(s) Animals ; Anthozoa/metabolism ; Bacteria/metabolism ; Sulfonium Compounds/metabolism
    Chemical Substances dimethylpropiothetin (C884XA7QGG) ; Sulfonium Compounds
    Language English
    Publishing date 2023-11-22
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2810933-8
    ISSN 2375-2548 ; 2375-2548
    ISSN (online) 2375-2548
    ISSN 2375-2548
    DOI 10.1126/sciadv.adk1910
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Plasmid-mediated quinolone resistance determinants in fluoroquinolone-nonsusceptible Escherichia coli isolated from patients with urinary tract infections in a university hospital, 2009-2010 and 2020.

    Kuo, Pei-Yun / Lo, Yu-Ting / Chiou, Yu-Jing / Chen, Chao-An / Hidrosollo, Jazon Harl / Thuy, Tran Thi Dieu / Zhang, Yen-Zhen / Wang, Ming-Cheng / Lin, Tzu-Ping / Lin, Wei-Hung / Kao, Cheng-Yen

    Journal of global antimicrobial resistance

    2022  Volume 30, Page(s) 241–248

    Abstract: Objectives: This study aimed to characterize the plasmid-mediated quinolone resistance (PMQR) in fluoroquinolone nonsusceptible E. coli (FQNSEC) isolated from patients with urinary tract infections (UTIs) in 2019-2010 and 2020.: Methods: A total of ... ...

    Abstract Objectives: This study aimed to characterize the plasmid-mediated quinolone resistance (PMQR) in fluoroquinolone nonsusceptible E. coli (FQNSEC) isolated from patients with urinary tract infections (UTIs) in 2019-2010 and 2020.
    Methods: A total of 844 E. coli isolates were collected from UTI patients at National Cheng Kung University Hospital. The antimicrobial susceptibility of E. coli isolates to 21 antibiotics was determined by disk diffusion tests. The distribution of phylogenetic groups, virulence factor, and PMQR genes was determined by PCR. Conjugation assays were performed to investigate the transferability of qnr genes from FQNSEC isolates to E. coli C600.
    Results: We found 211 (41.9%) and 152 (44.7%) E. coli isolates were FQNSEC in 2009-2010 and 2020, respectively. Phylogenetic group B2 was dominant in FQNSEC isolates (52.34%), followed by group F (10.47%), group B1 (9.64%), and group D (9.64%). FQNSEC isolates were more resistant to 17 of 19 tested antimicrobial agents, compared to the fluoroquinolone susceptible E. coli. PMQR screening results showed 34, 22, and 10 FQNSEC isolates containing aac(6')-Ib-cr, qnr genes, and efflux pump genes (qepA or oqxAB), respectively. PMQR E. coli isolates were more nonsusceptible to gentamicin, amoxicillin, ampicillin/sulbactam, imipenem, cefazolin, cefuroxime, cefmetazole, ceftriaxone, ceftazidime, and cefepime compared to non-PMQR FQNSEC. Moreover, 16 of 22 qnr-carrying plasmids were transferrable to the recipient C600.
    Conclusion: Here, we reported the high prevalence of MDR- and XDR-E. coli in FQNSEC isolates. Moreover, qnr-carrying plasmids were highly transferable and led to the resistance to other classes of antibiotics in the transconjugants.
    MeSH term(s) Anti-Bacterial Agents/pharmacology ; Escherichia coli/genetics ; Escherichia coli Infections ; Fluoroquinolones/pharmacology ; Hospitals ; Humans ; Microbial Sensitivity Tests ; Phylogeny ; Plasmids/genetics ; Quinolones/pharmacology ; Urinary Tract Infections
    Chemical Substances Anti-Bacterial Agents ; Fluoroquinolones ; Quinolones
    Language English
    Publishing date 2022-06-10
    Publishing country Netherlands
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2710046-7
    ISSN 2213-7173 ; 2213-7173
    ISSN (online) 2213-7173
    ISSN 2213-7173
    DOI 10.1016/j.jgar.2022.06.004
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article: Microbiome Restructuring: Dominant Coral Bacterium

    Tandon, Kshitij / Chiou, Yu-Jing / Yu, Sheng-Ping / Hsieh, Hernyi Justin / Lu, Chih-Ying / Hsu, Ming-Tsung / Chiang, Pei-Wen / Chen, Hsing-Ju / Wada, Naohisa / Tang, Sen-Lin

    mSystems

    2022  Volume 7, Issue 4, Page(s) e0035922

    Abstract: Bacteria in the coral microbiome play a crucial role in determining coral health and fitness, and the coral host often restructures its microbiome composition in response to external factors. An important but often neglected factor determining this ... ...

    Abstract Bacteria in the coral microbiome play a crucial role in determining coral health and fitness, and the coral host often restructures its microbiome composition in response to external factors. An important but often neglected factor determining this microbiome restructuring is the ability of microbiome members to respond to changes in the environment. To address this issue, we examined how the microbiome structure of
    Language English
    Publishing date 2022-06-15
    Publishing country United States
    Document type Journal Article
    ISSN 2379-5077
    ISSN 2379-5077
    DOI 10.1128/msystems.00359-22
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: High-resolution spatial and genomic characterization of coral-associated microbial aggregates in the coral

    Wada, Naohisa / Hsu, Ming-Tsung / Tandon, Kshitij / Hsiao, Silver Sung-Yun / Chen, Hsing-Ju / Chen, Yu-Hsiang / Chiang, Pei-Wen / Yu, Sheng-Ping / Lu, Chih-Ying / Chiou, Yu-Jing / Tu, Yung-Chi / Tian, Xuejiao / Chen, Bi-Chang / Lee, Der-Chuen / Yamashiro, Hideyuki / Bourne, David G / Tang, Sen-Lin

    Science advances

    2022  Volume 8, Issue 27, Page(s) eabo2431

    Abstract: Bacteria commonly form aggregates in a range of coral species [termed coral-associated microbial aggregates (CAMAs)], although these structures remain poorly characterized despite extensive efforts studying the coral microbiome. Here, we comprehensively ... ...

    Abstract Bacteria commonly form aggregates in a range of coral species [termed coral-associated microbial aggregates (CAMAs)], although these structures remain poorly characterized despite extensive efforts studying the coral microbiome. Here, we comprehensively characterize CAMAs associated with
    Language English
    Publishing date 2022-07-06
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2810933-8
    ISSN 2375-2548 ; 2375-2548
    ISSN (online) 2375-2548
    ISSN 2375-2548
    DOI 10.1126/sciadv.abo2431
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Comparative genomics: Dominant coral-bacterium Endozoicomonas acroporae metabolizes dimethylsulfoniopropionate (DMSP).

    Tandon, Kshitij / Lu, Chih-Ying / Chiang, Pei-Wen / Wada, Naohisa / Yang, Shan-Hua / Chan, Ya-Fan / Chen, Ping-Yun / Chang, Hsiao-Yu / Chiou, Yu-Jing / Chou, Ming-Shean / Chen, Wen-Ming / Tang, Sen-Lin

    The ISME journal

    2020  Volume 14, Issue 5, Page(s) 1290–1303

    Abstract: Dominant coral-associated Endozoicomonas bacteria species are hypothesized to play a role in the coral sulfur cycle by metabolizing dimethylsulfoniopropionate (DMSP) into dimethylsulfide (DMS); however, no sequenced genome to date harbors genes for this ... ...

    Abstract Dominant coral-associated Endozoicomonas bacteria species are hypothesized to play a role in the coral sulfur cycle by metabolizing dimethylsulfoniopropionate (DMSP) into dimethylsulfide (DMS); however, no sequenced genome to date harbors genes for this process. In this study, we assembled high-quality (>95% complete) draft genomes of strains of the recently added species Endozoicomonas acroporae (Acr-14
    MeSH term(s) Animals ; Anthozoa/microbiology ; Bacteria/genetics ; Carbon-Sulfur Lyases ; Gammaproteobacteria/genetics ; Gammaproteobacteria/metabolism ; Genomics ; Sulfides ; Sulfonium Compounds/metabolism ; Sulfur/metabolism
    Chemical Substances Sulfides ; Sulfonium Compounds ; Sulfur (70FD1KFU70) ; dimethylpropiothetin (C884XA7QGG) ; Carbon-Sulfur Lyases (EC 4.4.-) ; dimethylsulfoniopropionate lyase (EC 4.4.-) ; dimethyl sulfide (QS3J7O7L3U)
    Language English
    Publishing date 2020-02-13
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2406536-5
    ISSN 1751-7370 ; 1751-7362
    ISSN (online) 1751-7370
    ISSN 1751-7362
    DOI 10.1038/s41396-020-0610-x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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