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Article ; Online: Making EHRs Reusable: A Common Framework of Data Operations.

Pedrera, Miguel / Garcia, Noelia / Rubio, Paula / Cruz, Juan Luis / Bernal, José Luis / Serrano, Pablo

Studies in health technology and informatics

2021 Volume 287, Page(s) 129–133

Abstract: Reuse of EHRs requires data extraction and transformation processes are based on homogeneous and formalized operations in order to make them understandable, reproducible and auditable. This work aims to define a common framework of data operations for ... ...

Abstract	Reuse of EHRs requires data extraction and transformation processes are based on homogeneous and formalized operations in order to make them understandable, reproducible and auditable. This work aims to define a common framework of data operations for obtaining EHR-derived datasets for secondary use. Thus, 21 operations were identified from different data-driven projects of a 1,300-beds tertiary Hospital. Then, ISO 13606 standard was used to formalize them. This work is the starting point to homogenize ETL processes for the reuse of EHRs, applicable to any condition and organization. In future studies, defined data operations will be implemented and validated in projects of different purposes.
MeSH term(s)	Electronic Health Records
Language	English
Publishing date	2021-11-18
Publishing country	Netherlands
Document type	Journal Article
ISSN	1879-8365
ISSN (online)	1879-8365
DOI	10.3233/SHTI210831
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article ; Online: Soil polluted by waste motor oil

Pasaye-Anaya Lizbeth / Márquez-Benavides Liliana / Ignacio-De la Cruz Juan Luis / Sánchez-Yáñez Juan Manuel

Journal of the Selva Andina Research Society, Vol 11, Iss 2, Pp 84-

remediation by biostimulation

2020 Volume 93

Abstract: Soil impacted by waste motor oil (WMO) inhibits microbial activity for recycling the basic elements of life an affecting negatively its fertility. Biostimulation is a way to recover soil by eliminating WMO at a value lower than 4400 ppm permitted by an ... ...

Abstract	Soil impacted by waste motor oil (WMO) inhibits microbial activity for recycling the basic elements of life an affecting negatively its fertility. Biostimulation is a way to recover soil by eliminating WMO at a value lower than 4400 ppm permitted by an environmental rule called NOM-138-SEMARNAT/SSA1-2012. The aim of this research was the biostimulation of soil polluted by WMO in different in depending ways with the mineral solution (MS), or vermicompost (VC) with Phaseolus vulgaris o green manure (GM). Recovering soil was determined by the production of CO2 from WMO´s oxidation, by measuring the WMO oxidizing bacterial population (WMOOB) and WMO´s concentration by Soxhlet; experimental data were analyzed with standard Tukey-error. The results showed that biostimulation of soil impacted by 17000 ppm of WMO with MS decreased it until 4386 ppm, but better biostimulation with VC which reducing WMO until 3766 ppm in 6 months, both values lower than the maximum accepted by the NOM 138, and statistically different compared to soil BIS by P. vulgaris or GM with 8596 ppm of WMO and the 17000 ppm of WMO from soil non-BIS or negative control. This concludes that biostimulation could be specific depending on hydrocarbon´s complex as WMO was eliminated by MS and VC according to NOM-138 for recovering soil´s fertility.
Keywords	soil ; wmo ; biostimulation ; microbial population ; mineralization ; nom-138 ; Science ; Q ; Biology (General) ; QH301-705.5 ; Biochemistry ; QD415-436
Subject code	630
Language	Spanish
Publishing date	2020-08-01T00:00:00Z
Publisher	Selva Andina Research Society
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article ; Online: Recovering of soil polluted by hydrocarbons mixing

Rico-Cerda José Luis / Ignacio-De la Cruz Juan Luis / Mondragón-Reynel Perla Guadalupe / Sánchez-Yáñez Juan Manuel

Journal of the Selva Andina Research Society, Vol 11, Iss 2, Pp 76-

2020 Volume 83

Abstract: In Mexico, a soil poor in nitrogen (N) polluted by 100000 ppm of waste motor oil (WMO) is an environmental problem also because is drastically affecting soil´s proprieties related with mineralization of organic matter and lost its fertility since ... ...

Abstract	In Mexico, a soil poor in nitrogen (N) polluted by 100000 ppm of waste motor oil (WMO) is an environmental problem also because is drastically affecting soil´s proprieties related with mineralization of organic matter and lost its fertility since exceeding the maximum accepted limit of 4400 ppm of the Mexican environmental rule called NOM-138-SEMARNAT-2012 (NOM-138). An ecological alternative to solve it is to treat for eliminating WMO and to recover its fertility. Therefore, the aims of this research were: a) bioremediation of soil polluted by 100000 ppm of WMO b) phytoremediation by Sorghum vulgare with Aspergillus niger and Penicillium chrysogenum to decrease WMO´s concentration at lower value of 4400 ppm accepted by the NOM-138. In that sense the variable response to measure soil´s recovering was: a) WMO´s concentration with Soxhlet, after bioremediation and phytoremediation b) while at phytoremediation the phenology and biomass at seedling stage of S. vulgare with A. niger and P. chrysogenum. All experimental data were validated by ANOVA/Tukey HSD P<0.05%. Results showed that bioremediation and phytoremediation decreased WMO until 3400 ppm, numerical value lower than the maximum established by NOM-138, both processing were efficient to recover for cropping aim. In 120 days regarding as a short period of time.
Keywords	soil ; wmo ; biostimulation ; nom-138 ; s. vulgare ; fungy ; Science ; Q ; Biology (General) ; QH301-705.5 ; Biochemistry ; QD415-436
Subject code	630
Language	Spanish
Publishing date	2020-08-01T00:00:00Z
Publisher	Selva Andina Research Society
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article ; Online: Ovarian Response and Fertility after Short-Term Progestagen/eCG Treatments Are Compromised in Nulliparous Sheep during Non-Breeding Season.

Santos-Jimenez, Zurisaday / Martínez-Ros, Paula / Encinas, Teresa / Morales-Cruz, Juan Luis / Guerrero-Gallegos, Hugo Zuriel / Gonzalez-Avalos, Ramiro / Gonzalez-Bulnes, Antonio / Guillen-Muñoz, Juan Manuel

Veterinary sciences

2022 Volume 9, Issue 12

Abstract: The objective of this investigation was to determine the ovarian response, fertility, and prolificacy of nulliparous sheep when compared to multiparous sheep after a short-term (7 days) CIDR/eCG treatment which was administered during the non-breeding ... ...

Abstract	The objective of this investigation was to determine the ovarian response, fertility, and prolificacy of nulliparous sheep when compared to multiparous sheep after a short-term (7 days) CIDR/eCG treatment which was administered during the non-breeding season. All the multiparous sheep, whereas only 54% of the nulliparous ewes, showed signs of estrus. However, 81.8% of the multiparous sheep and 100% of the nulliparous ewes ovulated. Fertility was also low after short-term progesterone treatments during the anestrous season in maiden sheep (30.8 vs. 72.7% in multiparous ewes). Such results indicate significant differences in the response to CIDR/eCG protocols for induction and synchronization of estrus and ovulation between nulliparous and multiparous sheep during the non-breeding season.
Language	English
Publishing date	2022-11-28
Publishing country	Switzerland
Document type	Journal Article
ZDB-ID	2768971-2
ISSN	2306-7381 ; 2306-7381
ISSN (online)	2306-7381
ISSN	2306-7381
DOI	10.3390/vetsci9120663
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Article ; Online: Growth of Zea mays innoculated with Bacillus cereus and Micromonospora echinospora at 50% of nitrogen fertilizer

García-Radillo Pedro / Montaño-Arias Noé Manuel / Ignacio-Cruz Juan Luis / Santoyo-Pizano Gustavo / Sánchez-Yáñez Juan Manuel

Journal of the Selva Andina Research Society, Vol 10, Iss 1, Pp 16-

2019 Volume 24

Abstract: In México Zea mays (maize) is a crop which demands nitrogen fertilizer (NIFE) as a NH4NO3 (ammonium nitrate), in that sense hiperfertilization causes soil's lost productivity. An altemative of solution to solve this problem is the reduction and the ... ...

Abstract	In México Zea mays (maize) is a crop which demands nitrogen fertilizer (NIFE) as a NH4NO3 (ammonium nitrate), in that sense hiperfertilization causes soil's lost productivity. An altemative of solution to solve this problem is the reduction and the optimization of NIFE with inoculants based on genus and species of plant growth-promoting bacteria (PGPB). The aim of this study was to analyze the growth of Z. mays inoculated with Bacillus cereus and Micromono-spora echinospora at 50% reduced NIFE. An experimental design of randomized blocks was used with (NH4NO3) as NIFE at the dose 50% (5 g/L) for Z. mays inoculated with the PGPB: the response variables on its seed: germination percent, day to germination, its shoot and root phenology: height plant, number of leaves, and root long and biomass: aerial fresh weight, root fresh weight, aerial dry weight, root dry weight (AFW/RFW/ADW/RDW). Experimental data were analyzed by ANOVA and minimal significant difference (LSD). Results showed a positive effect of B. cereus and M. echinospora on Z. mays seed as well as at seedling and flowering stages, where Z. mays had a RDW of 3.5 g, numerical valué statistically different compared with 1.1 g of RDW of Z. mays fed with NIFE at 100% dose, not inoculated used as a relative control (RC) Those data suggested that the inoculation of Z. mays with B. cereus and M. echinospora improving radical absorption of NIFE reduce at 50%, due to PGBP were able to transform seed and root organic exudates into growth promoting vegetal compounds (GPVC) or phytohormons avoiding soil's lost productivity.
Keywords	soil ; z. mays ; nitrogen fertilizer ; radical absorption ; b. cereus ; m. echinospora ; phytohormons ; Science ; Q ; Biology (General) ; QH301-705.5 ; Biochemistry ; QD415-436
Subject code	580
Language	Spanish
Publishing date	2019-02-01T00:00:00Z
Publisher	Selva Andina Research Society
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article ; Online: Response of Glycine max to Azospirillum lipoferum y Rhizobium etli at 50% dose of nitrogen fertilizer

Santoyo-Pizano Gustavo / Ignacio-Cruz Juan Luis / Vargas-Hernández Martha Elizabeth / Gallegos-Morales Gabriel / Sánchez-Yáñez Juan Manuel

Journal of the Selva Andina Research Society, Vol 9, Iss 2, Pp 96-

2018 Volume 103

Abstract: The production of Glycine max (soybean) demands nitrogenous fertilizer (NIFE), as a NH4NO3 (ammonium nitrate) to supply its N demand, which when is applied in excess causes lost soil`s productivity. An alternative for this problem is to reduce and to ... ...

Abstract	The production of Glycine max (soybean) demands nitrogenous fertilizer (NIFE), as a NH4NO3 (ammonium nitrate) to supply its N demand, which when is applied in excess causes lost soil`s productivity. An alternative for this problem is to reduce and to optimize NIFE, with inoculants based in genus and species of plant growth promoting bacteria (PGPB). The aim of this research was to analyze G. max response to Azospirillum lipoferum and Rhizobium etli at 50% dose of NIFE. In that sense experimental was conducting by 5 treatments with NIFE at 100% and 50% doses for G. max inoculated with PGPB, response was based on its phenology: plant height (PH) and root length (RL) and its biomass: shoot fresh weight (SFW), root fresh weight (RFW), shoot dry weight (SDW), root dry weight (RDW). Experimental data were analyzed by ANOVA and Tukey HSD p<0.05%. Results indicated a positive respond of G. max with A. lipoferum and R. etli at seedling level was registered 0.90 g of SDW, this numerical value was statistically different than 0.16 g of SDW of G. max not inoculating, fed with mineral solution with 100% of NIFE dose, used as relative control (RC). At level of flowering G. max responded to A. lipoferum and R. etli registered 3.17 g of RFW this numerical value was statistically different compared to 1.79 g of RFW of G. max or RC. This data suggests that the positive respond of G. max was due to both PGPB able to transform radical exudates in phytohormones to improve radical absorption of N and optimize NIFE reduced at 50% dose, showing health growing and at the same preventing soil`s lost productivity
Keywords	soil ; nife ; glycine max ; azospirillum lipoferum ; rhizobium etli ; root exudates ; phytohormones ; Science ; Q ; Biology (General) ; QH301-705.5 ; Biochemistry ; QD415-436
Subject code	580
Language	Spanish
Publishing date	2018-08-01T00:00:00Z
Publisher	Selva Andina Research Society
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article ; Online: Use of EHRs in a Tertiary Hospital During COVID-19 Pandemic: A Multi-Purpose Approach Based on Standards.

Pedrera, Miguel / Garcia, Noelia / Blanco, Alvar / Terriza, Ana Isabel / Cruz, Jaime / Lopez, Elena Ana / Calvo, Fernando / Jimenez, María Jesús / Gonzalez, Patricia / Quiros, Víctor / Cruz, Juan Luis / Bernal, José Luis / Serrano, Pablo

Studies in health technology and informatics

2021 Volume 281, Page(s) 28–32

Abstract: This work aims to describe how EHRs have been used to meet the needs of healthcare providers and researchers in a 1,300-beds tertiary Hospital during COVID-19 pandemic. For this purpose, essential clinical concepts were identified and standardized with ... ...

Abstract	This work aims to describe how EHRs have been used to meet the needs of healthcare providers and researchers in a 1,300-beds tertiary Hospital during COVID-19 pandemic. For this purpose, essential clinical concepts were identified and standardized with LOINC and SNOMED CT. After that, these concepts were implemented in EHR systems and based on them, data tools, such as clinical alerts, dynamic patient lists and a clinical follow-up dashboard, were developed for healthcare support. In addition, these data were incorporated into standardized repositories and COVID-19 databases to improve clinical research on this new disease. In conclusion, standardized EHRs allowed implementation of useful multi- purpose data resources in a major Hospital in the course of the pandemic.
MeSH term(s)	COVID-19 ; Electronic Health Records ; Humans ; Pandemics ; SARS-CoV-2 ; Tertiary Care Centers
Language	English
Publishing date	2021-05-27
Publishing country	Netherlands
Document type	Journal Article
ISSN	1879-8365
ISSN (online)	1879-8365
DOI	10.3233/SHTI210114
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Article: A simple thermal-detoxified method for castor bean (Ricinus communis L.) cake, and its potential nutraceutical properties

Herrera, Mayra Denise / Jiménez-Ocampo, Rafael / Rosales-Serna, Rigoberto / Rodríguez-González, Jorge Alberto / Santos-De la Cruz, Juan Luis / Cruz-Bravo, Raquel Karina / Alvarado-Aguilar, Pablo / Gamboa-Gómez, Claudia Ivette / Guerrero-Romero, Fernando

Industrial crops and products. 2021 Dec. 15, v. 174

2021

Abstract: In order to search viable alternatives for detoxifying the castor bean toxic waste, and harnessing for diverse applications, the objective of this study was evaluate the thermal-detoxified method and determinate the castor bean cake nutraceutical ... ...

Abstract	In order to search viable alternatives for detoxifying the castor bean toxic waste, and harnessing for diverse applications, the objective of this study was evaluate the thermal-detoxified method and determinate the castor bean cake nutraceutical potential properties. Autoclaving (15 psi, 15 min, 121 ° C) process in presence of humidity (30 %) was performed as detoxified method. Presence of ricin was evaluated using ELISA and the castor bean cake lethal dose (LD₅₀) determinate by acute toxicity assay in male Wistar rats. Additionally, the castor bean cake chemical and phytochemical characterization was evaluated and its nutraceutical potential determinate throughout antioxidant and hypoglycemic effects. The results showed that after the thermal-detoxified treatment, ricin concentration decreased over 99 %, and the castor bean cake LD₅₀ was greater than 5000 mg/kg of body weight. After detoxified process, protein content increases 17.5 % and lipids decreases 10 %. In addition, a greater content of insoluble fraction (13 %) and 2.6-fold times more of resistant starch, as compared to un-detoxified cake, was observed. Furthermore, in comparison with untreated cake, thermal process led to an upsurge of gallic acid (3.5-fold times) and 4-O- caffeoylquinic acid (8.8-fold times). About nutraceutical potential properties, a lower antioxidant capacity and a hypoglycemic effect, in comparison with the control, were observed. The thermal-detoxified method eliminates ricin of castor bean cake, providing to be a potential source of proteins, lipids, fiber, and bioactive compounds as well as exhibiting antioxidant and hypoglycemic effects.
Keywords	Ricinus communis ; acute toxicity ; antioxidant activity ; antioxidants ; autoclaving ; body weight ; cakes ; castor bean cake ; castor beans ; chlorogenic acid ; dietary supplements ; gallic acid ; glycemic effect ; humidity ; males ; phytochemicals ; protein content ; resistant starch ; ricin ; wastes
Language	English
Dates of publication	2021-1215
Publishing place	Elsevier B.V.
Document type	Article
ZDB-ID	1132158-1
ISSN	1872-633X ; 0926-6690
ISSN (online)	1872-633X
ISSN	0926-6690
DOI	10.1016/j.indcrop.2021.114151
Database	NAL-Catalogue (AGRICOLA)

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Article ; Online: Soil impacted by 90000 ppm of waste motor oil

Ignacio-De la Cruz Juan Luis / Márquez-Benavides Liliana / Rico-Cerda José Luis / Saucedo-Martínez Blanca Celeste / Sánchez-Yáñez Juan Manuel

Journal of the Selva Andina Research Society, Vol 10, Iss 2, Pp 86-

biostimulation and phytoremediation

2019 Volume 95

Abstract: In México any soil polluted by 90000 ppm waste motor oil (WMO), this concentration is over the maximun acepted of 4400 ppm by regulation law called as a NOM-138-SEMARNAT / SSA1-2003 (NOM-138), 9000 ppm of WMO is causing soils fertility decreasing. An ... ...

Abstract	In México any soil polluted by 90000 ppm waste motor oil (WMO), this concentration is over the maximun acepted of 4400 ppm by regulation law called as a NOM-138-SEMARNAT / SSA1-2003 (NOM-138), 9000 ppm of WMO is causing soils fertility decreasing. An alternative solution is biostimulation (BIS) by detergent following by mineral solution then. Subsequently the BIS by H2O2 as a supplier of O2 and a crude fungi extract containing lacease able to hydrolyze aromatic of WMO, then by Phaseolus vulgarís as a green manure to reduce WMO; concluding by phytoremediation (PHYTO) with Cicer aretinum The objectives of this research were: i) BIS of soil contaminated by 90000 ppm of WMO ii) PHYTO by C. aretinum with Micromonospora echinospora and Penicillium chrysogenumlo decrease WMO at lower concentration valué than the máximum accepted by NOM-138. In sense at soil's, variable-response of BIS was initial and final concentration of WMO by Soxhlet, at the PHYTO, phenology and biomass of C. aretinum were taken at seedling. The experimental data were analyzed by ANOVA/Tukey HSD P <0.05%. Results showed that BIS and PHYTO of soil impacted by 90000 ppm of WMO decreased until 1200 ppm numerical valué statistically different compared to 79000 ppm of soil polluted by WMO, without BIS and either PHYTO or negative control. Those results showed that BIS and PHYTO are an effective technique for recovering soil polluting by relative high level of WMO according to NOM-138.
Keywords	soil ; wmo ; biostimulation ; phytoremediation ; c. arietinum ; m. echinospora ; p. chrysogenum ; mineralization ; coometabolism ; nom-138 ; Science ; Q ; Biology (General) ; QH301-705.5 ; Biochemistry ; QD415-436
Subject code	630
Language	Spanish
Publishing date	2019-08-01T00:00:00Z
Publisher	Selva Andina Research Society
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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Article ; Online: Responds of Zea mays to Burkholderia spp endophyte from Zea mays var mexicana (teocinte)

García-Reyna Miriam Judith / Santoyo-Pizano Gustavo / Hernández-Mendoza José Luis / Ignacio-De la Cruz Juan Luis / Sánchez-Yáñez, Juan Manuel

Journal of the Selva Andina Research Society, Vol 10, Iss 2, Pp 73-

2019 Volume 85

Abstract: Zea mays var mexicana or teocinte is a grass, considered one of the main ancestors of Zea mays. Teocinte, like other grasses, is associated with genera of endophytic plant growth promoters (EPGPB) in the interior of plant tissues. Z. mays is a domestic ... ...

Abstract	Zea mays var mexicana or teocinte is a grass, considered one of the main ancestors of Zea mays. Teocinte, like other grasses, is associated with genera of endophytic plant growth promoters (EPGPB) in the interior of plant tissues. Z. mays is a domestic grass normally cultivated under the intensive production system, with relatively high doses of nitrogen fertilizer (NIFE), a possible alternative solution to minimize this problem, is the inoculation of the seed of Z. mays with genera of EPGPB teocinte, which colonize the roots, stems, leaves and promote a healthy growth at a reduced dose up to 50% NIFE such as urea, which is equivalent to decrease from 280 kg/ha-1to 140 kg/ha-1, of what is recommended for the región of northern Michoacán and southern Guanajuato, México. The objectives of this work were: i) to determine the density of Burkholderia spp BEPCV of teocinte, ii) to analyze the effect of the inoculation of Burkholderia spp EPGPB on the growth of Z. mays, at reduced dose of NIFE in greenhouse, iii) identify Burkholderia spp BEPCV teocinte. The population density of Burkholdería spp EPGPB was determined in tissues (organs), seeds, stem-leaves and roots of teocinte by sowing them on Pseudomonas cepacia azelaic acid tryptamine (PCAT), after incubation. Burkholdería spp colonies were selected for abundance in: leaves, stem, roots and/or seeds. These isolates of Burkholdería spp, were coded with the keys T41 and T42 and inoculated in Z. mays sown in sterile sand, where as the only variable-response the total dry weight was determined compared to the Z. mays cultivated with the recommended NIFE dose, for that región, it was concluded with the biochemical characterization. The results show that in Burkholdería spp BEPCV of teocinte, a density of 3.4 Log CFU/g of fresh weight (GPF) was registered in the root, of 3.0 Log CFU/GPF in the seed and a similar valué in the stem-leaves of teocinte The response of Z. mays to Burkholdería T41 caused an increase of 47% in the dry weight of the root to the tillering, and of 57% to the extensión of the stem, compared with the Z. mays without inoculating with the máximum level of NIFE (urea) 280 kg/ha-1. The biochemical identification profile of Burkholdería spp supports a genetic relationship with B. víetnamíensís. It is concluded that teocinte is a source of EPGPB for sustainable production Z. mays at a reduced dose of NIFE.
Keywords	teocinte ; entophytic bacteria ; biological fixing n2 ; n fertilizer ; z. mays ; ; Science ; Q ; Biology (General) ; QH301-705.5 ; Biochemistry ; QD415-436
Subject code	580
Language	Spanish
Publishing date	2019-08-01T00:00:00Z
Publisher	Selva Andina Research Society
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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