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  1. Article ; Online: New analyses exploring multimorbidity in psoriasis.

    Dand, Nick / Ramessur, Ravi

    The British journal of dermatology

    2023  Volume 190, Issue 3, Page(s) 299–300

    MeSH term(s) Humans ; Multimorbidity ; Mendelian Randomization Analysis ; Psoriasis/epidemiology
    Language English
    Publishing date 2023-11-27
    Publishing country England
    Document type Editorial ; Comment
    ZDB-ID 80076-4
    ISSN 1365-2133 ; 0007-0963
    ISSN (online) 1365-2133
    ISSN 0007-0963
    DOI 10.1093/bjd/ljad475
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Comorbidities of Keloid and Hypertrophic Scars Among Participants in UK Biobank.

    Ung, Chuin Y / Warwick, Alasdair / Onoufriadis, Alexandros / Barker, Jonathan N / Parsons, Maddy / McGrath, John A / Shaw, Tanya J / Dand, Nick

    JAMA dermatology

    2023  Volume 159, Issue 2, Page(s) 172–181

    Abstract: Importance: Keloids and hypertrophic scars (excessive scarring) are relatively understudied disfiguring chronic skin conditions with high treatment resistance.: Objective: To evaluate established comorbidities of excessive scarring in European ... ...

    Abstract Importance: Keloids and hypertrophic scars (excessive scarring) are relatively understudied disfiguring chronic skin conditions with high treatment resistance.
    Objective: To evaluate established comorbidities of excessive scarring in European individuals, with comparisons across ethnic groups, and to identify novel comorbidities via a phenome-wide association study (PheWAS).
    Design, setting, and participants: This multicenter cross-sectional population-based cohort study used UK Biobank (UKB) data and fitted logistic regression models for testing associations between excessive scarring and a variety of outcomes, including previously studied comorbidities and 1518 systematically defined disease categories. Additional modeling was performed within subgroups of participants defined by self-reported ethnicity (as defined in UK Biobank). Of 502 701 UKB participants, analyses were restricted to 230078 individuals with linked primary care records.
    Exposures: Keloid or hypertrophic scar diagnoses.
    Main outcomes and measures: Previously studied disease associations (hypertension, uterine leiomyoma, vitamin D deficiency, atopic eczema) and phenotypes defined in the PheWAS Catalog.
    Results: Of the 972 people with excessive scarring, there was a higher proportion of female participants compared with the 229 106 controls (65% vs 55%) and a lower proportion of White ethnicity (86% vs 95%); mean (SD) age of the total cohort was 64 (8) years. Associations were identified with hypertension and atopic eczema in models accounting for age, sex, and ethnicity, and the association with atopic eczema (odds ratio [OR], 1.68; 95% CI, 1.36-2.07; P < .001) remained statistically significant after accounting for additional potential confounders. Fully adjusted analyses within ethnic groups revealed associations with hypertension in Black participants (OR, 2.05; 95% CI, 1.13-3.72; P = .02) and with vitamin D deficiency in Asian participants (OR, 2.24; 95% CI, 1.26-3.97; P = .006). The association with uterine leiomyoma was borderline significant in Black women (OR, 1.93; 95% CI, 1.00-3.71; P = .05), whereas the association with atopic eczema was significant in White participants (OR, 1.68; 95% CI, 1.34-2.12; P < .001) and showed a similar trend in Asian (OR, 2.17; 95% CI, 1.01-4.67; P = .048) and Black participants (OR, 1.89; 95% CI, 0.83-4.28; P = .13). The PheWAS identified 110 significant associations across disease systems; of the nondermatological, musculoskeletal disease and pain symptoms were prominent.
    Conclusions and relevance: This cross-sectional study validated comorbidities of excessive scarring in UKB with comprehensive coverage of health outcomes. It also documented additional phenome-wide associations that will serve as a reference for future studies to investigate common underlying pathophysiologic mechanisms.
    MeSH term(s) Humans ; Female ; Keloid/epidemiology ; Cicatrix, Hypertrophic/epidemiology ; Cross-Sectional Studies ; Cohort Studies ; Dermatitis, Atopic ; Biological Specimen Banks ; Hypertension/epidemiology ; Leiomyoma ; United Kingdom/epidemiology
    Language English
    Publishing date 2023-01-04
    Publishing country United States
    Document type Multicenter Study ; Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2701761-8
    ISSN 2168-6084 ; 2168-6068
    ISSN (online) 2168-6084
    ISSN 2168-6068
    DOI 10.1001/jamadermatol.2022.5607
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Text-mined phenotype annotation and vector-based similarity to improve identification of similar phenotypes and causative genes in monogenic disease patients.

    Saklatvala, Jake R / Dand, Nick / Simpson, Michael A

    Human mutation

    2018  Volume 39, Issue 5, Page(s) 643–652

    Abstract: The genetic diagnosis of rare monogenic diseases using exome/genome sequencing requires the true causal variant(s) to be identified from tens of thousands of observed variants. Typically a virtual gene panel approach is taken whereby only variants in ... ...

    Abstract The genetic diagnosis of rare monogenic diseases using exome/genome sequencing requires the true causal variant(s) to be identified from tens of thousands of observed variants. Typically a virtual gene panel approach is taken whereby only variants in genes known to cause phenotypes resembling the patient under investigation are considered. With the number of known monogenic gene-disease pairs exceeding 5,000, manual curation of personalized virtual panels using exhaustive knowledge of the genetic basis of the human monogenic phenotypic spectrum is challenging. We present improved probabilistic methods for estimating phenotypic similarity based on Human Phenotype Ontology annotation. A limitation of existing methods for evaluating a disease's similarity to a reference set is that reference diseases are typically represented as a series of binary (present/absent) observations of phenotypic terms. We evaluate a quantified disease reference set, using term frequency in phenotypic text descriptions to approximate term relevance. We demonstrate an improved ability to identify related diseases through the use of a quantified reference set, and that vector space similarity measures perform better than established information content-based measures. These improvements enable the generation of bespoke virtual gene panels, facilitating more accurate and efficient interpretation of genomic variant profiles from individuals with rare Mendelian disorders. These methods are available online at https://atlas.genetics.kcl.ac.uk/~jake/cgi-bin/patient_sim.py.
    MeSH term(s) Computer Simulation ; Data Curation ; Data Mining ; Databases, Genetic ; Disease/genetics ; Genetic Predisposition to Disease ; Humans ; Logistic Models ; Phenotype ; Probability ; Search Engine
    Language English
    Publishing date 2018-03-15
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1126646-6
    ISSN 1098-1004 ; 1059-7794
    ISSN (online) 1098-1004
    ISSN 1059-7794
    DOI 10.1002/humu.23413
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Psoriasis and Genetics.

    Dand, Nick / Mahil, Satveer K / Capon, Francesca / Smith, Catherine H / Simpson, Michael A / Barker, Jonathan N

    Acta dermato-venereologica

    2020  Volume 100, Issue 3, Page(s) adv00030

    Abstract: Psoriasis is a common inflammatory skin disease caused by the interplay between multiple genetic and environmental risk factors. This review summarises recent progress in elucidating the genetic basis of psoriasis, particularly through large genome-wide ... ...

    Abstract Psoriasis is a common inflammatory skin disease caused by the interplay between multiple genetic and environmental risk factors. This review summarises recent progress in elucidating the genetic basis of psoriasis, particularly through large genome-wide association studies. We illustrate the power of genetic analyses for disease stratification. Psoriasis can be stratified by phenotype (common plaque versus rare pustular variants), or by outcome (prognosis, comorbidities, response to treatment); recent progress has been made in delineating the genetic contribution in each of these areas. We also highlight how genetic data can directly inform the development of effective psoriasis treatments.
    MeSH term(s) Genetic Predisposition to Disease/genetics ; Genome-Wide Association Study ; Humans ; Phenotype ; Psoriasis/drug therapy ; Psoriasis/genetics ; Translational Research, Biomedical ; Treatment Outcome
    Language English
    Publishing date 2020-01-30
    Publishing country Sweden
    Document type Journal Article ; Review
    ZDB-ID 80007-7
    ISSN 1651-2057 ; 0001-5555
    ISSN (online) 1651-2057
    ISSN 0001-5555
    DOI 10.2340/00015555-3384
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: A novel heterozygous missense variant in ribosomal protein L21 associated with familial hypotrichosis simplex.

    Rayinda, Tuntas / McSweeney, Sheila M / Fassihi, Hiva / Fenton, David / Liu, Lu / Stefanato, Catherine M / Dand, Nick / McGrath, John A / Tziotzios, Christos

    Clinical and experimental dermatology

    2023  Volume 48, Issue 7, Page(s) 840–843

    MeSH term(s) Humans ; Hypotrichosis/genetics ; Ribosomal Proteins ; Mutation, Missense ; Pedigree
    Chemical Substances ribosomal protein L21 (125360-61-4) ; Ribosomal Proteins
    Language English
    Publishing date 2023-03-18
    Publishing country England
    Document type Journal Article
    ZDB-ID 195504-4
    ISSN 1365-2230 ; 0307-6938
    ISSN (online) 1365-2230
    ISSN 0307-6938
    DOI 10.1093/ced/llad102
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Characteristics of 'super responders' and 'super nonresponders' to first biologic monotherapy for psoriasis: a nested case-control study.

    Mason, Kayleigh J / Alabas, Oras A / Dand, Nick / Warren, Richard B / Reynolds, Nick J / Barker, Jonathan N W N / Yiu, Zenas Z N / Smith, Catherine H / Griffiths, Christopher E M

    The British journal of dermatology

    2023  Volume 190, Issue 3, Page(s) 441–444

    MeSH term(s) Humans ; Case-Control Studies ; Psoriasis/drug therapy ; Biological Products/therapeutic use ; Treatment Outcome
    Chemical Substances Biological Products
    Language English
    Publishing date 2023-11-10
    Publishing country England
    Document type Journal Article
    ZDB-ID 80076-4
    ISSN 1365-2133 ; 0007-0963
    ISSN (online) 1365-2133
    ISSN 0007-0963
    DOI 10.1093/bjd/ljad446
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Familial hypotrichosis simplex of the scalp associated with a novel heterozygous nonsense variant in CDSN.

    Rayinda, Tuntas / McSweeney, Sheila M / Lalagianni, Nikolina / Liu, Lu / Guy, Alyson / Fenton, David / Stefanato, Catherine M / Dand, Nick / McGrath, John A / Tziotzios, Christos

    Clinical and experimental dermatology

    2023  Volume 48, Issue 5, Page(s) 579–583

    MeSH term(s) Humans ; Scalp ; Hypotrichosis/genetics ; Codon, Nonsense ; Pedigree ; Intercellular Signaling Peptides and Proteins
    Chemical Substances Codon, Nonsense ; CDSN protein, human ; Intercellular Signaling Peptides and Proteins
    Language English
    Publishing date 2023-05-01
    Publishing country England
    Document type Journal Article
    ZDB-ID 195504-4
    ISSN 1365-2230 ; 0307-6938
    ISSN (online) 1365-2230
    ISSN 0307-6938
    DOI 10.1093/ced/llad067
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Genome-wide meta-analysis implicates variation affecting mast cell biology in urticaria.

    McSweeney, Sheila Mary / Saklatvala, Jake / Rispoli, Rossella / Ganier, Clarisse / Woszczek, Grzegorz / Thomas, Laurent / Hveem, Kristian / Løset, Mari / Dand, Nick / Tziotzios, Christos / Simpson, Michael / McGrath, John Alexander

    The Journal of allergy and clinical immunology

    2023  Volume 153, Issue 2, Page(s) 521–526.e11

    Abstract: Background: Urticaria is characterized by inappropriate mast cell degranulation leading to the development of wheals and/or angioedema. Twin and family studies indicate that there is a substantial heritable component to urticaria risk.: Objective: ... ...

    Abstract Background: Urticaria is characterized by inappropriate mast cell degranulation leading to the development of wheals and/or angioedema. Twin and family studies indicate that there is a substantial heritable component to urticaria risk.
    Objective: Our aim was to identify genomic loci at which common genetic variation influences urticaria susceptibility.
    Methods: Genome-wide association studies of urticaria (including all subtypes) from 3 European cohorts (UK Biobank, FinnGen, and the Trøndelag Health Study [HUNT]) were combined through statistical meta-analysis (14,306 urticaria cases and 650,664 controls). Cases were identified via electronic health care records from primary and/or secondary care. To identify putative causal variants and genes, statistical fine-mapping, colocalization, and interrogation of publicly available single-cell transcriptome sequencing resources were performed.
    Results: Genome-wide significant associations (P < 5 × 10
    Conclusion: Common genetic variation influencing the risk of developing urticaria was identified at 6 genomic loci. The relationship between genes with roles in mast cell biology and several association signals implicates genetic variability of specific components of mast cell function in the development of urticaria.
    MeSH term(s) Humans ; Genome-Wide Association Study ; Mast Cells ; Urticaria/genetics ; Proteins/genetics ; Angioedema ; Genetic Predisposition to Disease ; Polymorphism, Single Nucleotide
    Chemical Substances Proteins
    Language English
    Publishing date 2023-09-09
    Publishing country United States
    Document type Meta-Analysis ; Journal Article
    ZDB-ID 121011-7
    ISSN 1097-6825 ; 1085-8725 ; 0091-6749
    ISSN (online) 1097-6825 ; 1085-8725
    ISSN 0091-6749
    DOI 10.1016/j.jaci.2023.08.033
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  9. Article ; Online: Genetic Validation of Psoriasis Phenotyping in UK Biobank Supports the Utility of Self-Reported Data and Composite Definitions for Large Genetic and Epidemiological Studies.

    Saklatvala, Jake R / Hanscombe, Ken B / Mahil, Satveer K / Tsoi, Lam C / Elder, James T / Barker, Jonathan N / Simpson, Michael A / Smith, Catherine H / Dand, Nick

    The Journal of investigative dermatology

    2023  Volume 143, Issue 8, Page(s) 1598–1601.e10

    MeSH term(s) Humans ; Self Report ; Biological Specimen Banks ; Epidemiologic Studies ; Psoriasis/epidemiology ; Psoriasis/genetics ; United Kingdom/epidemiology
    Language English
    Publishing date 2023-03-03
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 80136-7
    ISSN 1523-1747 ; 0022-202X
    ISSN (online) 1523-1747
    ISSN 0022-202X
    DOI 10.1016/j.jid.2023.02.010
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Atopic Polygenic Risk Score Is Associated with Paradoxical Eczema Developing in Patients with Psoriasis Treated with Biologics.

    Al-Janabi, Ali / Eyre, Steve / Foulkes, Amy C / Khan, Adnan R / Dand, Nick / Burova, Ekaterina / DeSilva, Bernadette / Makrygeorgou, Areti / Davies, Emily / Smith, Catherine H / Griffiths, Christopher E M / Morris, Andrew P / Warren, Richard B

    The Journal of investigative dermatology

    2023  Volume 143, Issue 8, Page(s) 1470–1478.e1

    Abstract: Biologic therapies for psoriasis can cause paradoxical eczema. The role of genetic factors in its pathogenesis is unknown. To identify risk variants, we conducted a GWAS of 3,212 patients with psoriasis, of whom 88 developed paradoxical eczema. Two lead ... ...

    Abstract Biologic therapies for psoriasis can cause paradoxical eczema. The role of genetic factors in its pathogenesis is unknown. To identify risk variants, we conducted a GWAS of 3,212 patients with psoriasis, of whom 88 developed paradoxical eczema. Two lead SNPs reached genome-wide significance (P ≤ 5 × 10
    MeSH term(s) Humans ; Dermatitis, Atopic/complications ; Eczema/epidemiology ; Eczema/genetics ; Psoriasis/drug therapy ; Psoriasis/genetics ; Psoriasis/complications ; Risk Factors ; Biological Products ; Netrin Receptors
    Chemical Substances Biological Products ; UNC5B protein, human ; Netrin Receptors
    Language English
    Publishing date 2023-02-15
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 80136-7
    ISSN 1523-1747 ; 0022-202X
    ISSN (online) 1523-1747
    ISSN 0022-202X
    DOI 10.1016/j.jid.2023.01.021
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