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  1. Article: Soil Thermophiles and Their Extracellular Enzymes: A Set of Capabilities Able to Provide Significant Services and Risks.

    Gonzalez, Juan M / Santana, Margarida M / Gomez, Enrique J / Delgado, José A

    Microorganisms

    2023  Volume 11, Issue 7

    Abstract: During this century, a number of reports have described the potential roles of thermophiles in the upper soil layers during high-temperature periods. This study evaluates the capabilities of these microorganisms and proposes some potential consequences ... ...

    Abstract During this century, a number of reports have described the potential roles of thermophiles in the upper soil layers during high-temperature periods. This study evaluates the capabilities of these microorganisms and proposes some potential consequences and risks associated with the activity of soil thermophiles. They are active in organic matter mineralization, releasing inorganic nutrients (C, S, N, P) that otherwise remain trapped in the organic complexity of soil. To process complex organic compounds in soils, these thermophiles require extracellular enzymes to break down large polymers into simple compounds, which can be incorporated into the cells and processed. Soil thermophiles are able to adapt their extracellular enzyme activities to environmental conditions. These enzymes can present optimum activity under high temperatures and reduced water content. Consequently, these microorganisms have been shown to actively process and decompose substances (including pollutants) under extreme conditions (i.e., desiccation and heat) in soils. While nutrient cycling is a highly beneficial process to maintain soil service quality, progressive warming can lead to excessive activity of soil thermophiles and their extracellular enzymes. If this activity is too high, it may lead to reduction in soil organic matter, nutrient impoverishment and to an increased risk of aridity. This is a clear example of a potential effect of future predicted climate warming directly caused by soil microorganisms with major consequences for our understanding of ecosystem functioning, soil health and the risk of soil aridity.
    Language English
    Publishing date 2023-06-24
    Publishing country Switzerland
    Document type Journal Article ; Review
    ZDB-ID 2720891-6
    ISSN 2076-2607
    ISSN 2076-2607
    DOI 10.3390/microorganisms11071650
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Plastic Debris in Nests of Two Water Bird Species Breeding on Inland Saline Lakes in a Mediterranean Biosphere Reserve.

    Luna, Álvaro / Gil-Delgado, José A / Bernat-Ponce, Edgar

    Animals : an open access journal from MDPI

    2022  Volume 12, Issue 22

    Abstract: Despite more studies being carried out to know the impacts associated with plastic debris and much effort being spent on marine ecosystems, the impacts of plastics on terrestrial and freshwater species remain largely unknown. Here, we explored the ... ...

    Abstract Despite more studies being carried out to know the impacts associated with plastic debris and much effort being spent on marine ecosystems, the impacts of plastics on terrestrial and freshwater species remain largely unknown. Here, we explored the presence of anthropogenic materials in nests of two wader species, the gull-billed tern (Gelochelidon nilotica) and the black-winged stilt (Himantopus himantopus), breeding on the inland salt lakes in the “La Mancha Húmeda” Biosphere Reserve, Central Spain. We revealed the presence of anthropogenic debris, mainly macroplastics (>5 mm), in 2.4% and 12.5% of the sampled nests of the gull-billed tern and the black-winged stilt, respectively. The fragments found in nests ranged from 8 mm to 257 mm for the gull-billed tern and from 7 mm to 19 mm for the black-winged stilt. This debris showed no clear pattern of color or size and probably originated both in the agricultural activities in the surroundings and domestic refuse. Although we did not detect any pernicious impacts on adults or chicks (e.g., entangled, injured, or dead individuals), the presence of plastics and other human waste directly placed in nests located in a protected area should warn us about the ubiquity of these pollutants, and the endocrine and immunological effects, among others, that may reduce the recruitment of new animals to the population should be assessed.
    Language English
    Publishing date 2022-11-21
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2606558-7
    ISSN 2076-2615
    ISSN 2076-2615
    DOI 10.3390/ani12223222
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article: Influence of water availability and temperature on estimates of microbial extracellular enzyme activity.

    Gomez, Enrique J / Delgado, Jose A / Gonzalez, Juan M

    PeerJ

    2021  Volume 9, Page(s) e10994

    Abstract: Soils are highly heterogeneous and support highly diverse microbial communities. Microbial extracellular enzymes breakdown complex polymers into small assimilable molecules representing the limiting step of soil organic matter mineralization. This ... ...

    Abstract Soils are highly heterogeneous and support highly diverse microbial communities. Microbial extracellular enzymes breakdown complex polymers into small assimilable molecules representing the limiting step of soil organic matter mineralization. This process occurs on to soil particles although currently it is typically estimated in laboratory aqueous solutions. Herein, estimates of microbial extracellular enzyme activity were obtained over a broad range of temperatures and water availabilities frequently observed at soil upper layers. A
    Language English
    Publishing date 2021-03-03
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2703241-3
    ISSN 2167-8359
    ISSN 2167-8359
    DOI 10.7717/peerj.10994
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Side-Selective Solid-Phase Metallaphotoredox

    Delgado, José A C / Tian, Ya-Ming / Marcon, Michela / König, Burkhard / Paixão, Márcio W

    Journal of the American Chemical Society

    2023  Volume 145, Issue 48, Page(s) 26452–26462

    Abstract: Postsynthetic diversification of peptides through selective modification of endogenous amino acid side chains has enabled significant advances in peptide drug discovery while expanding the biological and medical chemistry space. However, current tools ... ...

    Abstract Postsynthetic diversification of peptides through selective modification of endogenous amino acid side chains has enabled significant advances in peptide drug discovery while expanding the biological and medical chemistry space. However, current tools have been focused on the modification of reactive polar and ionizable side chains, whereas the decoration of aromatic systems (e.g., the
    MeSH term(s) Tryptophan/chemistry ; Peptides/chemistry ; Amino Acids/chemistry ; Oxidation-Reduction ; Solid-Phase Synthesis Techniques
    Chemical Substances Tryptophan (8DUH1N11BX) ; Peptides ; Amino Acids
    Language English
    Publishing date 2023-11-17
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 3155-0
    ISSN 1520-5126 ; 0002-7863
    ISSN (online) 1520-5126
    ISSN 0002-7863
    DOI 10.1021/jacs.3c10792
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Eating in the city: Experimental effect of anthropogenic food resources on the body condition, nutritional status, and oxidative stress of an urban bioindicator passerine.

    Bernat-Ponce, Edgar / Gil-Delgado, José A / Guardiola, José V / López-Iborra, Germán M

    Journal of experimental zoology. Part A, Ecological and integrative physiology

    2023  Volume 339, Issue 9, Page(s) 803–815

    Abstract: Urban areas provide a constant and predictable supply of anthropogenic processed food. The House Sparrow (Passer domesticus Linnaeus, 1758), a declining urban bioindicator species, has recently been reported to have a high level of oxidative stress, with ...

    Abstract Urban areas provide a constant and predictable supply of anthropogenic processed food. The House Sparrow (Passer domesticus Linnaeus, 1758), a declining urban bioindicator species, has recently been reported to have a high level of oxidative stress, with urban diet or pollutants proposed as the potential cause. In this study, we aimed to experimentally determine the effects of two urban trophic resource types (bar snack food leftovers and pet food) on sparrows' physical condition, plasma biochemical nutritional parameters, and blood oxidative status in captivity. To exclude the potential previous effect of urban pollutants, 75 House Sparrows were captured from a rural area in SE Spain and kept in outdoor aviaries. Individuals were exposed to one of three diet treatments: control diet (fruit, vegetables, poultry grain mixture), bar snack diet (ultra-processed snacks), or cat food diet (dry pellets) for 20 days. Blood samples were collected before and after diet treatments to analyze the relative change rates of 12 variables, including physical condition, nutritional status, and oxidant-antioxidant status. A principal component analysis was run to identify gradients of variables covariation, and Generalized Linear Mixed Models were used to determine the effect of diets on each selected PC and on raw variables. The bar snack diet led to signs of anemia and malnutrition, and females tended to lose body condition. The cat food diet increased oxidative stress indicators and protein catabolism. Unbalanced urban diets can affect the body condition and nutritional physiology of House Sparrows and may also induce oxidative stress despite the absence of environmental pollution.
    Language English
    Publishing date 2023-07-09
    Publishing country United States
    Document type Journal Article
    ZDB-ID 1474896-4
    ISSN 2471-5646 ; 1932-5223 ; 2471-5646 ; 1932-5231 ; 1552-499X
    ISSN (online) 2471-5646 ; 1932-5223
    ISSN 2471-5646 ; 1932-5231 ; 1552-499X
    DOI 10.1002/jez.2730
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: Effect of replacing surface with underground rubbish containers on urban House Sparrows Passer domesticus

    Bernat-Ponce, Edgar / Ferrer, David / Gil-Delgado, José A. / López-Iborra, Germán M.

    Urban ecosystems. 2022 Feb., v. 25, no. 1

    2022  

    Abstract: Urbanisation processes are increasing worldwide at surprising rates affecting wildlife in many ways: changing habitat structure, reducing resources, and modifying the distribution, composition and abundance of local biota. In different countries, urban ... ...

    Abstract Urbanisation processes are increasing worldwide at surprising rates affecting wildlife in many ways: changing habitat structure, reducing resources, and modifying the distribution, composition and abundance of local biota. In different countries, urban waste collection techniques are evolving and surface rubbish containers (neighbourhood receptacles for temporarily storing anthropogenic household waste located above-ground on the streets) are being replaced with underground ones (metal boxes with steel chutes that fed into large underground containers) to improve sanitation measures, to avoid bad smells and waste scattering by animals. We aimed to detect if House Sparrows were more abundant close to surface rubbish containers than close to the underground ones. We recorded an abundance index of House Sparrows during two visits in winter 2018–2019 to point counts located in groups of both container types (80 and 85 groups of underground and surface containers, respectively) in eight towns of Eastern Spain. We modelled the abundance index according to rubbish container type, and 14 other environmental variables at four scales: container, nearest buildings, near urban features, and general locality features using GLMMs. House Sparrows were more abundant close to surface than to underground rubbish containers, which may be linked with higher food debris availability. The presence of other urban features (bar terraces, private gardens, mature trees) interacting with the rubbish containers also influenced the abundance of House Sparrows. The replacement of above-ground rubbish containers with underground ones may deprive House Sparrows resources, which could lead to the decline of this species, especially in urban areas with little green cover.
    Keywords Passer domesticus ; habitats ; sanitation ; steel ; urbanization ; wastes ; wildlife ; Spain
    Language English
    Dates of publication 2022-02
    Size p. 121-132.
    Publishing place Springer US
    Document type Article
    ZDB-ID 2019257-5
    ISSN 1573-1642 ; 1083-8155
    ISSN (online) 1573-1642
    ISSN 1083-8155
    DOI 10.1007/s11252-021-01138-y
    Database NAL-Catalogue (AGRICOLA)

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  7. Article: Environmental factors affect the response of microbial extracellular enzyme activity in soils when determined as a function of water availability and temperature.

    Gomez, Enrique J / Delgado, José A / Gonzalez, Juan M

    Ecology and evolution

    2020  Volume 10, Issue 18, Page(s) 10105–10115

    Abstract: Microorganisms govern soil carbon cycling with critical effects at local and global scales. The activity of microbial extracellular enzymes is generally the limiting step for soil organic matter mineralization. Nevertheless, the influence of soil ... ...

    Abstract Microorganisms govern soil carbon cycling with critical effects at local and global scales. The activity of microbial extracellular enzymes is generally the limiting step for soil organic matter mineralization. Nevertheless, the influence of soil characteristics and climate parameters on microbial extracellular enzyme activity (EEA) performance at different water availabilities and temperatures remains to be detailed. Different soils from the Iberian Peninsula presenting distinctive climatic scenarios were sampled for these analyses. Results showed that microbial EEA in the mesophilic temperature range presents optimal rates under wet conditions (high water availability) while activity at the thermophilic temperature range (60°C) could present maximum EEA rates under dry conditions if the soil is frequently exposed to high temperatures. Optimum water availability conditions for maximum soil microbial EEA were influenced mainly by soil texture. Soil properties and climatic parameters are major environmental components ruling soil water availability and temperature which were decisive factors regulating soil microbial EEA. This study contributes decisively to the understanding of environmental factors on the microbial EEA in soils, specifically on the decisive influence of water availability and temperature on EEA. Unlike previous belief, optimum EEA in high temperature exposed soil upper layers can occur at low water availability (i.e., dryness) and high temperatures. This study shows the potential for a significant response by soil microbial EEA under conditions of high temperature and dryness due to a progressive environmental warming which will influence organic carbon decomposition at local and global scenarios.
    Language English
    Publishing date 2020-08-16
    Publishing country England
    Document type Journal Article
    ZDB-ID 2635675-2
    ISSN 2045-7758
    ISSN 2045-7758
    DOI 10.1002/ece3.6672
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: Persistence of microbial extracellular enzymes in soils under different temperatures and water availabilities.

    Gómez, Enrique J / Delgado, Jose A / González, Juan M

    Ecology and evolution

    2020  Volume 10, Issue 18, Page(s) 10167–10176

    Abstract: Microbial extracellular enzyme activity (EEA) is critical for the decomposition of organic matter in soils. Generally, EEA represents the limiting step governing soil organic matter mineralization. The high complexity of soil microbial communities and ... ...

    Abstract Microbial extracellular enzyme activity (EEA) is critical for the decomposition of organic matter in soils. Generally, EEA represents the limiting step governing soil organic matter mineralization. The high complexity of soil microbial communities and the heterogeneity of soils suggest potentially complex interactions between microorganisms (and their extracellular enzymes), organic matter, and physicochemical factors. Previous studies have reported the existence of maximum soil EEA at high temperatures although microorganisms thriving at high temperature represent a minority of soil microbial communities. To solve this paradox, we attempt to evaluate if soil extracellular enzymes from thermophiles could accumulate in soils. Methodology at this respect is scarce and an adapted protocol is proposed. Herein, the approach is to analyze the persistence of soil microbial extracellular enzymes at different temperatures and under a broad range of water availability. Results suggest that soil high-temperature EEA presented longer persistence than enzymes with optimum activity at moderate temperature. Water availability influenced enzyme persistence, generally preserving for longer time the extracellular enzymes. These results suggest that high-temperature extracellular enzymes could be naturally accumulated in soils. Thus, soils could contain a reservoir of enzymes allowing a quick response by soil microorganisms to changing conditions. This study suggests the existence of novel mechanisms of interaction among microorganisms, their enzymes and the soil environment with relevance at local and global levels.
    Language English
    Publishing date 2020-08-17
    Publishing country England
    Document type Journal Article
    ZDB-ID 2635675-2
    ISSN 2045-7758
    ISSN 2045-7758
    DOI 10.1002/ece3.6677
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Recreational noise pollution of traditional festivals reduces the juvenile productivity of an avian urban bioindicator.

    Bernat-Ponce, Edgar / Gil-Delgado, José A / López-Iborra, Germán M

    Environmental pollution (Barking, Essex : 1987)

    2021  Volume 286, Page(s) 117247

    Abstract: Noise is a pollutant of emergent concern for ecologists and conservation biologists. Recreational noise pollution, especially unpredictable and intermittent sounds, and its effects on wildlife and biodiversity have been poorly studied. Researchers have ... ...

    Abstract Noise is a pollutant of emergent concern for ecologists and conservation biologists. Recreational noise pollution, especially unpredictable and intermittent sounds, and its effects on wildlife and biodiversity have been poorly studied. Researchers have paid very little attention to the effect of noisy traditional festivals (fireworks and powder-guns). This study aimed to explore the effect of these recreational activities on the juvenile productivity of an urban avian bioindicator: the house sparrow. We studied five pairs of localities in the Valencia Region (E Spain) with noisy traditional festivals. Each pair was composed of one locality with festivals during the breeding season and the closest similar locality, but with festivals outside the reproductive period (controls). Both locality types were sampled twice each spring (May-June of 2019 and 2020). Sampling dates were selected as 15 and 30 days after noisy festivals ended, while the control localities were sampled 1 day after the census of their correspondent town pair with noisy breeding season festivals. The ratio of the juveniles/adults detected during surveys in the influence area of festivals (100-m buffer around the parades route) was used as a house sparrow breeding success proxy. Data were analysed using GLMM: year (2019/2020), festivals season (breeding/non-breeding), survey (15/30 days), and their interactions were included as fixed factors. Pair of localities and locality nested within the pair were random factors. In 2019, juvenile productivity was lower in the towns with noisy traditional festivals during the breeding season than in the control towns. The 2020 festivals were cancelled due to COVID-19. In spring 2020, house sparrow juvenile productivity was the same in both town groups. Lockdown did not increase this species' juvenile productivity in the control localities in 2020 versus 2019.
    MeSH term(s) Animals ; COVID-19 ; Communicable Disease Control ; Environmental Biomarkers ; Holidays ; Humans ; Noise ; Plant Breeding ; SARS-CoV-2 ; Sparrows
    Chemical Substances Environmental Biomarkers
    Language English
    Publishing date 2021-05-03
    Publishing country England
    Document type Journal Article
    ZDB-ID 280652-6
    ISSN 1873-6424 ; 0013-9327 ; 0269-7491
    ISSN (online) 1873-6424
    ISSN 0013-9327 ; 0269-7491
    DOI 10.1016/j.envpol.2021.117247
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Metal-Mediated Organocatalysis in Water: Serendipitous Discovery of Aldol Reaction Catalyzed by the [Ru(bpy)

    Guzmán Ríos, David / Romero, Miguel A / González-Delgado, José A / Arteaga, Jesús F / Pischel, Uwe

    The Journal of organic chemistry

    2022  Volume 87, Issue 8, Page(s) 5412–5418

    Abstract: The [Ru(bpy) ...

    Abstract The [Ru(bpy)
    MeSH term(s) Aldehydes ; Catalysis ; Metals ; Nicotine/analogs & derivatives ; Water
    Chemical Substances Aldehydes ; Metals ; Water (059QF0KO0R) ; Nicotine (6M3C89ZY6R) ; nornicotine (83H6L5QD8Z) ; 3-hydroxybutanal (8C6G962B53)
    Language English
    Publishing date 2022-03-25
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 123490-0
    ISSN 1520-6904 ; 0022-3263
    ISSN (online) 1520-6904
    ISSN 0022-3263
    DOI 10.1021/acs.joc.2c00472
    Database MEDical Literature Analysis and Retrieval System OnLINE

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