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  1. Article: Evaluation of a ddPCR Commercial Assay for the Absolute Quantification of the Monkeypox Virus West Africa in Clinical Samples.

    Pomari, Elena / Mori, Antonio / Accordini, Silvia / Donini, Annalisa / Cordioli, Maddalena / Tacconelli, Evelina / Castilletti, Concetta

    Diagnostics (Basel, Switzerland)

    2023  Volume 13, Issue 7

    Abstract: Background: Monkeypox virus (MPXV) is a double-stranded DNA virus belonging to the orthopoxvirus genus in the family : Methods: The ddPCR reaction was assessed as a duplex assay using : Results: Regarding the clinical samples, compared to routine ... ...

    Abstract Background: Monkeypox virus (MPXV) is a double-stranded DNA virus belonging to the orthopoxvirus genus in the family
    Methods: The ddPCR reaction was assessed as a duplex assay using
    Results: Regarding the clinical samples, compared to routine molecular diagnostics, the ddPCR duplex assay showed 100% of specificity for all biological matrices and 100% sensitivity (10/10) for lesions, 100% (10/10) for rectal swabs, 90% (9/10) for pharyngeal swabs, and 60% (6/10) for whole blood.
    Conclusion: Overall, our data showed that the commercial ddPCR assay allowed the DNA detection of MPXV in 87.5% (35/40) of our cohort, highlighting useful technical indications for the different specimens with a potential greatest performance for skin lesions and rectal swabs.
    Language English
    Publishing date 2023-04-04
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2662336-5
    ISSN 2075-4418
    ISSN 2075-4418
    DOI 10.3390/diagnostics13071349
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Urine: A Pitfall for Molecular Detection of Toscana Virus? An Analytical Proof-of-Concept Study.

    Mori, Antonio / Matucci, Andrea / Pomari, Elena / Accordini, Silvia / Piubelli, Chiara / Donini, Annalisa / Nicolini, Lavinia / Castilletti, Concetta

    Viruses

    2024  Volume 16, Issue 1

    Abstract: Toscana virus (TOSV), a sandfly-borne virus, is an important etiological agent in human acute meningitis and meningoencephalitis in the Mediterranean area during the summer. However, the actual number of TOSV infections is underestimated. Laboratory ... ...

    Abstract Toscana virus (TOSV), a sandfly-borne virus, is an important etiological agent in human acute meningitis and meningoencephalitis in the Mediterranean area during the summer. However, the actual number of TOSV infections is underestimated. Laboratory confirmation is necessary because TOSV infection has overlapping clinical features with other neuro-invasive viral infections. Nowadays, the reference test for direct diagnosis in the acute phase of TOSV infection is the PCR based method for detecting TOSV in cerebrospinal fluid and/or plasma, serum, or blood. Although poorly employed, urine is another helpful biological matrix for TOSV detection. Urine is a matrix rich in PCR inhibitors that affect PCR efficiency; consequently, false negatives could be generated. To investigate the potential effect of urine PCR inhibitors on TOSV detection, we compared undiluted and diluted urine using 10-fold series of spiked TOSV. The results showed a significant improvement in TOSV detection performance in diluted urine (1 TCID
    MeSH term(s) Humans ; Sandfly fever Naples virus/genetics ; Body Fluids ; Plasma ; Encephalitis, California ; Laboratories
    Language English
    Publishing date 2024-01-08
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2516098-9
    ISSN 1999-4915 ; 1999-4915
    ISSN (online) 1999-4915
    ISSN 1999-4915
    DOI 10.3390/v16010098
    Database MEDical Literature Analysis and Retrieval System OnLINE

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