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  1. Article: Comparison of Serologic Assays for Middle East Respiratory Syndrome Coronavirus

    Drosten, Christian

    Emerging infectious diseases, 25(10):1878-1883

    2019  

    Abstract: Middle East respiratory syndrome coronavirus (MERS-CoV) was detected in humans in 2012. Since then, sporadic outbreaks with primary transmission through dromedary camels to humans and outbreaks in healthcare settings have shown that MERS-CoV continues to ...

    Institution Charité - Universitätsmedizin Berlin
    Deutsches Zentrum für Infektionsforschung
    Abstract Middle East respiratory syndrome coronavirus (MERS-CoV) was detected in humans in 2012. Since then, sporadic outbreaks with primary transmission through dromedary camels to humans and outbreaks in healthcare settings have shown that MERS-CoV continues to pose a threat to human health. Several serologic assays for MERS-CoV have been developed globally. We describe a collaborative study to investigate the comparability of serologic assays for MERS-CoV and assess any benefit associated with the introduction of a standard reference reagent for MERS-CoV serology. Our study findings indicate that, when possible, laboratories should use a testing algorithm including >2 tests to ensure correct diagnosis of MERS-CoV. We also demonstrate that the use of a reference reagent greatly improves the agreement between assays, enabling more consistent and therefore more meaningful comparisons between results.
    Keywords COVID-19 ; Coronavirus ; Oman ; MERS-CoV ; Middle East respiratory syndrome coronavirus ; South Korea ; Saudi Arabia ; antibodies ; diagnostics ; serology ; standard ; viruses
    Language English
    Document type Article
    Database Repository for Life Sciences

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  2. Article: Enzootic patterns of Middle East respiratory syndrome coronavirus in imported African and local Arabian dromedary camels: a prospective genomic study

    Drosten, Christian

    The lancet, 3(12):e521-e528

    2019  

    Abstract: BACKGROUND: The Middle East respiratory syndrome coronavirus (MERS-CoV) is a lethal zoonotic pathogen endemic to the Arabian Peninsula. Dromedary camels are a likely source of infection and the virus probably originated in Africa. We studied the genetic ... ...

    Institution Charité - Universitätsmedizin Berlin
    Deutsches Zentrum für Infektionsforschung
    Abstract BACKGROUND: The Middle East respiratory syndrome coronavirus (MERS-CoV) is a lethal zoonotic pathogen endemic to the Arabian Peninsula. Dromedary camels are a likely source of infection and the virus probably originated in Africa. We studied the genetic diversity, geographical structure, infection prevalence, and age-associated prevalence among camels at the largest entry port of camels from Africa into the Arabian Peninsula. METHODS: In this prospective genomic study, we took nasal samples from camels imported from Sudan and Djibouti into the Port of Jeddah in Jeddah, Saudi Arabia, over an almost 2-year period and local Arabian camels over 2 months in the year after surveillance of the port. We determined the prevalence of MERS-CoV infection, age-associated patterns of infection, and undertook phylogeographical and migration analyses to determine intercountry virus transmission after local lineage establishment. We compared all virological characteristics between the local and imported cohorts. We compared major gene deletions between African and Arabian strains of the virus. Reproductive numbers were inferred with Bayesian birth death skyline analyses. FINDINGS: Between Aug 10, 2016, and May 3, 2018, we collected samples from 1196 imported camels, of which 868 originated from Sudan and 328 from Djibouti, and between May 1, and June 25, 2018, we collected samples from 472 local camels, of which 189 were from Riyadh and 283 were from Jeddah, Saudi Arabia. Virus prevalence was higher in local camels than in imported camels (224 [47•5%] of 472 vs 157 [13•1%] of 1196; p<0•0001). Infection prevalence peaked among camels older than 1 year and aged up to 2 years in both groups, with 255 (66•9%) of 381 positive cases in this age group. Although the overall geographical distribution of the virus corresponded with the phylogenetic tree topology, some virus exchange was observed between countries corresponding with trade routes in the region. East and west African strains of the virus appear to be geographically separated, with an origin of west African strains in east Africa. African strains of the virus were not re-sampled in Saudi Arabia despite sampling approximately 1 year after importation from Africa. All local Arabian samples contained strains of the virus that belong to a novel recombinant clade (NRC) first detected in 2014 in Saudi Arabia. Reproduction number estimates informed by the sequences suggest sustained endemicity of NRC, with a mean Re of 1•16. INTERPRETATION: Despite frequent imports of MERS-CoV with camels from Africa, African lineages of MERS-CoV do not establish themselves in Saudi Arabia. Arabian strains of the virus should be tested for changes in virulence and transmissibility.
    Keywords COVID-19 ; Coronavirus ; MERS-CoV
    Language English
    Document type Article
    Database Repository for Life Sciences

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  3. Article: Virus- and Interferon Alpha-Induced Transcriptomes of Cells from the Microbat Myotis daubentonii

    Drosten, Christian

    iScience, 19:647-661

    2019  

    Abstract: Antiviral interferons (IFN-alpha/beta) are possibly responsible for the high tolerance of bats to zoonotic viruses. Previous studies focused on the IFN system of megabats (suborder Yinpterochiroptera). We present statistically robust RNA sequencing (RNA- ... ...

    Institution Charité - Universitätsmedizin Berlin
    Deutsches Zentrum für Infektionsforschung
    Abstract Antiviral interferons (IFN-alpha/beta) are possibly responsible for the high tolerance of bats to zoonotic viruses. Previous studies focused on the IFN system of megabats (suborder Yinpterochiroptera). We present statistically robust RNA sequencing (RNA-seq) data on transcriptomes of cells from the “microbat” Myotis daubentonii (suborder Yangochiroptera) responding at 6 and 24 h to either an IFN-inducing virus or treatment with IFN. Our data reveal genes triggered only by virus, either in both humans and Myotis (CCL4, IFNL3, CH25H), or exclusively in Myotis (STEAP4). Myotis cells also express a series of conserved IFN-stimulated genes (ISGs) and an unusually high paralog number of the antiviral ISG BST2 (tetherin) but lack several ISGs that were described for megabats (EMC2, FILIP1, IL17RC, OTOGL, SLC24A1). Also, in contrast to megabats, we detected neither different IFN-alpha subtypes nor an unusually high baseline expression of IFNs. Thus, Yangochiroptera microbats, represented by Myotis, may possess an IFN system with distinctive features.
    Keywords Coronavirus ; Biological Sciences ; Immunity ; Omics ; Transcriptomics
    Language English
    Document type Article
    Database Repository for Life Sciences

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  4. Article: A metaanalysis of bat phylogenetics and positive selection based on genomes and transcriptomes from 18 species

    Drosten, Christian

    Proceedings of the National Academy of Sciences of the United States of America, 116(23):11351-11360

    2019  

    Abstract: Historically, the evolution of bats has been analyzed using a small number of genetic loci for many species or many genetic loci for a few species. Here we present a phylogeny of 18 bat species, each of which is represented in 1,107 orthologous gene ... ...

    Institution Charité - Universitätsmedizin Berlin
    Deutsches Zentrum für Infektionsforschung
    Abstract Historically, the evolution of bats has been analyzed using a small number of genetic loci for many species or many genetic loci for a few species. Here we present a phylogeny of 18 bat species, each of which is represented in 1,107 orthologous gene alignments used to build the tree. We generated a transcriptome sequence of Hypsignathus monstrosus, the African hammer-headed bat, and additional transcriptome sequence for Rousettus aegyptiacus, the Egyptian fruit bat. We then combined these data with existing genomic and transcriptomic data from 16 other bat species. In the analysis of such datasets, there is no clear consensus on the most reliable computational methods for the curation of quality multiple sequence alignments since these public datasets represent multiple investigators and methods, including different source materials (chromosomal DNA or expressed RNA). Here we lay out a systematic analysis of parameters and produce an advanced pipeline for curating orthologous gene alignments from combined transcriptomic and genomic data, including a software package: the Mismatching Isoform eXon Remover (MIXR). Using this method, we created alignments of 11,677 bat genes, 1,107 of which contain orthologs from all 18 species. Using the orthologous gene alignments created, we assessed bat phylogeny and also performed a holistic analysis of positive selection acting in bat genomes. We found that 181 genes have been subject to positive natural selection. This list is dominated by genes involved in immune responses and genes involved in the production of collagens.
    Keywords Coronavirus ; Chiroptera ; gene alignment ; orthologous genes ; phylogenetics ; transcriptome
    Language English
    Document type Article
    Database Repository for Life Sciences

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  5. Book ; Thesis: Untersuchung von bulgarischen Ixodida auf Infektionen mit Bunyaviren

    Ohlendorf, Valerie / Drosten, Christian

    2020  

    Institution Rheinische Friedrich-Wilhelms-Universität Bonn
    Author's details Valerie Ohlendorf, geb. Biewener ; 1. Gutachter: Prof. Dr. med. Christian Drosten
    Language German ; English
    Size 113 Seiten, Illustrationen, Diagramme, Karten
    Publishing place Bonn
    Publishing country Germany
    Document type Book ; Thesis
    Thesis / German Habilitation thesis Dissertation, Rheinische Friedrich-Wilhelms-Universität Bonn, 2020
    Note Enthält Veröffentlichung: "Huge diversity of phleboviruses in ticks from Strandja Nature Park, Bulgaria", DOI:10.1016/j.ttbdis.2019.03.001
    HBZ-ID HT020455241
    Database Catalogue ZB MED Medicine, Health

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  6. Article: Fusogenicity of the Ghana Virus (Henipavirus: Ghanaian bat henipavirus) Fusion Protein is Controlled by the Cytoplasmic Domain of the Attachment Glycoprotein

    Hoffmann, Markus / Mueller, Marcel / Drosten, Christian / Krüger, Nadine

    Viruses, 11(9):800

    2019  

    Abstract: The Ghana virus (GhV) is phylogenetically related to the zoonotic henipaviruses Nipah (NiV) and Hendra virus. Although GhV uses the highly conserved receptor ephrin-B2, the fusogenicity is restricted to cell lines of bat origin. Furthermore, the surface ... ...

    Institution Charité - Universitätsmedizin Berlin
    Deutsches Primatenzentrum (Göttingen)
    Abstract The Ghana virus (GhV) is phylogenetically related to the zoonotic henipaviruses Nipah (NiV) and Hendra virus. Although GhV uses the highly conserved receptor ephrin-B2, the fusogenicity is restricted to cell lines of bat origin. Furthermore, the surface expression of the GhV attachment glycoprotein (G) is reduced compared to NiV and most of this protein is retained in the endoplasmic reticulum (ER). Here, we generated truncated as well as chimeric GhV G proteins and investigated the influence of the structural domains (cytoplasmic tail, transmembrane domain, ectodomain) of this protein on the intracellular transport and the fusogenicity following coexpression with the GhV fusion protein (F). We demonstrate that neither the cytoplasmic tail nor the transmembrane domain is responsible for the intracellular retention of GhV G. Furthermore, the cytoplasmic tail of GhV G modulates the fusogenicity of GhV F and therefore controls the species-restricted fusogenicity of the GhV surface glycoproteins.
    Keywords Coronavirus ; Ghana virus ; attachment glycoprotein ; fusion ; intracellular retention
    Language English
    Document type Article
    Database Repository for Life Sciences

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  7. Article: Studies on membrane topology, N-glycosylation and functionality of SARS-CoV membrane protein

    Drosten, Christian

    Virology journal, 6(1):79

    2009  

    Abstract: The glycosylated membrane protein M of the severe acute respiratory syndrome associated coronavirus (SARS-CoV) is the main structural component of the virion and mediates assembly and budding of viral particles. The membrane topology of SARS-CoV M and ... ...

    Institution Institut für Virologie (Bonn)
    Robert Koch-Institut
    Philipps-Universität Marburg. Institut für Virologie
    Bernhard-Nocht-Institut für Tropenmedizin
    Abstract The glycosylated membrane protein M of the severe acute respiratory syndrome associated coronavirus (SARS-CoV) is the main structural component of the virion and mediates assembly and budding of viral particles. The membrane topology of SARS-CoV M and the functional significance of its N-glycosylation are not completely understood as is its interaction with the surface glycoprotein S. Using biochemical and immunofluorescence analyses we found that M consists of a short glycosylated N-terminal ectodomain, three transmembrane segments and a long, immunogenic C-terminal endodomain. Although the N-glycosylation site of M seems to be highly conserved between group 1 and 3 coronaviruses, studies using a recombinant SARS-CoV expressing a glycosylation-deficient M revealed that N-glycosylation of M neither influence the shape of the virions nor their infectivity in cell culture. Further functional analysis of truncated M proteins showed that the N-terminal 134 amino acids comprising the three transmembrane domains are sufficient to mediate accumulation of M in the Golgi complex and to enforce recruitment of the viral spike protein S to the sites of virus assembly and budding in the ERGIC.
    Keywords COVID-19 ; Infectious Bronchitis Virus ; Membrane Topology ; Severe Acute Respiratory Syndrome ; Perinuclear Region
    Language English
    Document type Article
    Database Repository for Life Sciences

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  8. Article: Development of a Whole-Virus ELISA for Serological Evaluation of Domestic Livestock as Possible Hosts of Human Coronavirus NL63

    El-Duah, Philip / SYLVERKEN, AUGUSTINA / Frimpong, Yaw / Adu-Sarkodie, Yaw / Drosten, Christian

    Viruses, 11(1):43

    2019  

    Abstract: Known human coronaviruses are believed to have originated in animals and made use of intermediate hosts for transmission to humans. The intermediate hosts of most of the human coronaviruses are known, but not for HCoV-NL63. This study aims to assess the ... ...

    Institution Charité - Universitätsmedizin Berlin
    Universitätsklinikum Bonn
    Abstract Known human coronaviruses are believed to have originated in animals and made use of intermediate hosts for transmission to humans. The intermediate hosts of most of the human coronaviruses are known, but not for HCoV-NL63. This study aims to assess the possible role of some major domestic livestock species as intermediate hosts of HCoV-NL63. We developed a testing algorithm for high throughput screening of livestock sera with ELISA and confirmation with recombinant immunofluorescence assay testing for antibodies against HCoV-NL63 in livestock. Optimization of the ELISA showed a capability of the assay to significantly distinguish HCoV-NL63 from HCoV-229E (U = 27.50, p < 0.001) and HCoV-OC43 (U = 55.50, p < 0.001) in coronavirus-characterized sera. Evaluation of the assay with collected human samples showed no significant difference in mean optical density values of immunofluorescence-classified HCoV-NL63-positive and HCoV-NL63-negative samples (F (1, 215) = 0.437, p = 0.509). All the top 5% (n = 8) most reactive human samples tested by ELISA were HCoV-NL63 positive by immunofluorescence testing. In comparison, only a proportion (84%, n = 42) of the top 25% were positive by immunofluorescence testing, indicating an increased probability of the highly ELISA reactive samples testing positive by the immunofluorescence assay. None of the top 5% most ELISA reactive livestock samples were positive for HCoV-NL63-related viruses by immunofluorescence confirmation. Ghanaian domestic livestock are not likely intermediate hosts of HCoV-NL63-related coronaviruses.
    Keywords COVID-19 ; Coronavirus ; ELISA ; immunofluorescence ; intermediate host ; livestock
    Language English
    Document type Article
    Database Repository for Life Sciences

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  9. Article: Im Corona-Gespräch mit Christian Drosten: "Wir werden das Virus nicht auslöschen"

    Drosten, Christian

    Laborjournal

    2020  Volume 27, Issue 10, Page(s) 16

    Language German
    Document type Article
    ZDB-ID 1237282-1
    ISSN 1612-8354
    Database Current Contents Medicine

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  10. Article ; Online: Zika virus and congenital malformations in perspective.

    Drosten, Christian

    Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

    2016  Volume 21, Issue 13

    MeSH term(s) Brain/abnormalities ; Brain/embryology ; Brain/virology ; Congenital Abnormalities/virology ; Fetus/abnormalities ; Humans ; Microcephaly/virology ; Travel ; Zika Virus ; Zika Virus Infection/complications
    Language English
    Publishing date 2016
    Publishing country Sweden
    Document type Editorial
    ZDB-ID 1338803-4
    ISSN 1560-7917 ; 1025-496X
    ISSN (online) 1560-7917
    ISSN 1025-496X
    DOI 10.2807/1560-7917.ES.2016.21.13.30182
    Database MEDical Literature Analysis and Retrieval System OnLINE

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