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  1. Article ; Online: Cytokine/chemokine profiles in squamous cell carcinoma correlate with precancerous and cancerous disease stage

    Zewen K. Tuong / Andrew Lewandowski / Jennifer A. Bridge / Jazmina L. G. Cruz / Miko Yamada / Duncan Lambie / Richard Lewandowski / Raymond J. Steptoe / Graham R. Leggatt / Fiona Simpson / Ian H. Frazer / H. Peter Soyer / James W. Wells

    Scientific Reports, Vol 9, Iss 1, Pp 1-

    2019  Volume 11

    Abstract: Abstract Actinic Keratosis (AK), Intraepidermal Carcinoma (IEC), and Squamous Cell Carcinoma (SCC) are generally considered to be advancing stages of the same disease spectrum. However, while AK often regress spontaneously, and IEC often regress in ... ...

    Abstract Abstract Actinic Keratosis (AK), Intraepidermal Carcinoma (IEC), and Squamous Cell Carcinoma (SCC) are generally considered to be advancing stages of the same disease spectrum. However, while AK often regress spontaneously, and IEC often regress in response to immune-activating treatments, SCC typically do not regress. Therefore, it is vital to define whether fundamental immunological changes occur during progression to SCC. Here we show that proinflammatory cytokine expression, chemokine expression, and immune cell infiltration density change during progression to SCC. Our findings suggest a switch from predominantly proinflammatory cytokine production to chemokine production is a key feature of progression from precancer to cancer. Together, these observations propose a model that can underpin current research and open new avenues of exploration into the clinical significance of these profiles with respect to immunotherapeutic or other treatment outcomes.
    Keywords Medicine ; R ; Science ; Q
    Subject code 616
    Language English
    Publishing date 2019-11-01T00:00:00Z
    Publisher Nature Publishing Group
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  2. Article ; Online: RNA-seq reveals more consistent reference genes for gene expression studies in human non-melanoma skin cancers

    Van L.T. Hoang / Lisa N. Tom / Xiu-Cheng Quek / Jean-Marie Tan / Elizabeth J. Payne / Lynlee L. Lin / Sudipta Sinnya / Anthony P. Raphael / Duncan Lambie / Ian H. Frazer / Marcel E. Dinger / H. Peter Soyer / Tarl W. Prow

    PeerJ, Vol 5, p e

    2017  Volume 3631

    Abstract: Identification of appropriate reference genes (RGs) is critical to accurate data interpretation in quantitative real-time PCR (qPCR) experiments. In this study, we have utilised next generation RNA sequencing (RNA-seq) to analyse the transcriptome of a ... ...

    Abstract Identification of appropriate reference genes (RGs) is critical to accurate data interpretation in quantitative real-time PCR (qPCR) experiments. In this study, we have utilised next generation RNA sequencing (RNA-seq) to analyse the transcriptome of a panel of non-melanoma skin cancer lesions, identifying genes that are consistently expressed across all samples. Genes encoding ribosomal proteins were amongst the most stable in this dataset. Validation of this RNA-seq data was examined using qPCR to confirm the suitability of a set of highly stable genes for use as qPCR RGs. These genes will provide a valuable resource for the normalisation of qPCR data for the analysis of non-melanoma skin cancer.
    Keywords RNA-seq ; Reference gene ; qPCR ; Non-melanoma skin cancer ; Medicine ; R ; Biology (General) ; QH301-705.5
    Language English
    Publishing date 2017-08-01T00:00:00Z
    Publisher PeerJ Inc.
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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