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  1. Article ; Online: Estimating lichen α- and β-diversity using satellite data at different spatial resolutions

    Cerrejón, Carlos / Valeria, Osvaldo / Fenton, Nicole J.

    Ecological Indicators. 2023 May, v. 149 p.110173-

    2023  

    Abstract: Understanding biodiversity patterns and its environmental drivers is crucial to meet conservation targets and develop effective monitoring tools. Inconspicuous species such as lichens require special attention since they are ecologically important but ... ...

    Abstract Understanding biodiversity patterns and its environmental drivers is crucial to meet conservation targets and develop effective monitoring tools. Inconspicuous species such as lichens require special attention since they are ecologically important but sensitive species that are often overlooked in conservation planning. Remote sensing (RS) can be particularly beneficial for these species as in combination with modelling techniques it allows planners to assess and better understand biodiversity patterns. This study aims to model the lichen α-diversity (species richness) and β-diversity (species turnover) biodiversity components using high resolution RS variables across a subarctic region in Northern Quebec (∼190.25 km²). Two sensors, one commercial (WorldView-3, WV3) and another freely accessible (Sentinel-2, S2), at different resolutions (1.2 m and 10 m, respectively) were tested separately to develop our variables and feed the models. Lichens were sampled in 45 plots across different habitat types, ranging from forested habitats (coniferous, deciduous) to wetlands (bogs, fens) and rocky outcrops. Two sets of uncorrelated variables (Red and NIR; EVI2) from each sensor were parallelly used to build the α- and β-diversity models (8 models in total) through Poisson regressions and generalized dissimilarity modelling (GDM), respectively. Red and NIR variables were useful for modeling the two biodiversity components at both resolutions, providing information on stand canopy closure and structure, respectively. EVI2, especially from WV3, was only informative for assessing β-diversity, providing similar information than Red. Poisson models explained up to 32 % of the variation in lichen α-diversity, with Red, NIR and EVI2, either from WV3 or S2, showing negative relationships with lichen richness. GDMs described well the relationship between β-diversity and spectral dissimilarity (R² from 0.25 to 0.30), except for the S2 EVI2 model (R² = 0.07), confirming that more spectrally and thus environmentally different areas tend to harbor different lichen communities. While WV3 often outperformed the S2 sensor, the latter still provides a powerful tool for the study of lichens and their conservation. This study contributes to improve our knowledge and to inform on the use of RS to understand biodiversity patterns of inconspicuous species, which we consider to be an essential step to enhance their representation in conservation planning.
    Keywords canopy ; fens ; habitats ; lichens ; models ; remote sensing ; species richness ; Quebec ; Boreal forests ; Cryptogams ; Ecological indicator ; High spatial resolution ; Structural attributes ; Unseen biodiversity
    Language English
    Dates of publication 2023-05
    Publishing place Elsevier Ltd
    Document type Article ; Online
    Note Use and reproduction
    ZDB-ID 2036774-0
    ISSN 1872-7034 ; 1470-160X
    ISSN (online) 1872-7034
    ISSN 1470-160X
    DOI 10.1016/j.ecolind.2023.110173
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  2. Article ; Online: How will climate change and forest harvesting influence the habitat quality of two culturally salient species?

    Thomas, Maxime / Boulanger, Yan / Asselin, Hugo / Lamara, Mebarek / Fenton, Nicole J

    The Science of the total environment

    2024  Volume 927, Page(s) 172148

    Abstract: Boreal landscapes face increasing disturbances which can affect cultural keystone species, i.e. culturally salient species that shape in a major way the cultural identity of a people. Given their importance, the fate of such species should be assessed to ...

    Abstract Boreal landscapes face increasing disturbances which can affect cultural keystone species, i.e. culturally salient species that shape in a major way the cultural identity of a people. Given their importance, the fate of such species should be assessed to be able to act to ensure their perennity. We assessed how climate change and forest harvesting will affect the habitat quality of Rhododendron groenlandicum and Vaccinium angustifolium, two cultural keystone species for many Indigenous peoples in eastern Canada. We used the forest landscape model LANDIS-II in combination with species distribution models to simulate the habitat quality of these two species on the territories of three Indigenous communities according to different climate change and forest harvesting scenarios. Climate-sensitive parameters included wildfire regimes as well as tree growth. Moderate climate change scenarios were associated with an increased proportion of R. groenlandicum and V. angustifolium in the landscape, the latter species also responding positively to severe climate change scenarios. Harvesting had a minimal effect, but slightly decreased the probability of presence of both species where it occurred. According to the modeling results, neither species is at risk under moderate climate change scenarios. However, under severe climate change, R. groenlandicum could decline as the proportion of deciduous trees would increase in the landscape. Climate change mitigation strategies, such as prescribed fires, may be necessary to limit this increase. This would prevent the decrease of R. groenlandicum, as well as contribute to preserve biodiversity and harvestable volumes.
    MeSH term(s) Climate Change ; Ecosystem ; Forests ; Conservation of Natural Resources ; Rhododendron ; Vaccinium ; Forestry ; Trees ; Canada
    Language English
    Publishing date 2024-04-01
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 121506-1
    ISSN 1879-1026 ; 0048-9697
    ISSN (online) 1879-1026
    ISSN 0048-9697
    DOI 10.1016/j.scitotenv.2024.172148
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  3. Article: Predictive mapping of bryophyte diversity associated with mature forests using LiDAR-derived indices in a strongly managed landscape

    Bourgouin, Maurane / Valeria, Osvaldo / Fenton, Nicole J.

    Ecological indicators. 2022 Mar., v. 136

    2022  

    Abstract: Recovery of bryophyte diversity following silvicultural treatments depends upon the reestablishment of favorable microhabitats and microclimatic conditions. Without sources of propagules (reproductive structures) within the managed landscape, however, ... ...

    Abstract Recovery of bryophyte diversity following silvicultural treatments depends upon the reestablishment of favorable microhabitats and microclimatic conditions. Without sources of propagules (reproductive structures) within the managed landscape, however, even optimal habitat conditions would not be sufficient to ensure bryophyte diversity. To identify sources of propagules and ensure their protection, we used indices that were derived from a Digital Elevation Model (DEMs) and an airborne point cloud (LiDAR; Light Detection and Ranging) as explanatory variables to predict bryophyte biodiversity. Bryophytes were collected in the intensively managed Black Brook District of New Brunswick, Canada, in eight mature managed and unmanaged forest types (n = 38). Our results show a strong bryophyte community gradient between wetter stands (Cedar, riparian zone and Spruce-Fir) and drier stands (Tolerant Harwood and Plantation) forming two distinctive groups. Indices explaining bryophyte composition and richness were related to moisture (closest distance to a stream), canopy (canopy relief ratio, canopy closure and density) and microtopography (Topographic Position Index). Models obtained from these indices explained 75% of bryophyte composition and predicted composition with a certainty of 71% The predominance of the closest distance to a stream in our model reinforces the great importance of buffer along the hydrological network. Buffers represent a substantial propagule source for the landscape and notably increase its ecological connectivity. Although wetter sites had greater richness, the completely different composition find at drier sites suggest that biodiversity management efforts to maintain bryophytes should not be restricted to wetter stands. Our model demonstrates the potential of airborne LiDAR-derived indices as surrogates for field data in estimating and mapping bryophyte compositions to understand the variation in diversity across the managed landscape. This model can be used as a dynamic tool to target areas that represent the overall bryophyte diversity of the managed landscape to ensure protection of propagule sources and favors reestablishment.
    Keywords Bryophyta ; biodiversity ; canopy ; data collection ; digital elevation models ; hydrology ; landscapes ; lidar ; microclimate ; microrelief ; riparian areas ; streams ; New Brunswick
    Language English
    Dates of publication 2022-03
    Publishing place Elsevier Ltd
    Document type Article
    ZDB-ID 2036774-0
    ISSN 1872-7034 ; 1470-160X
    ISSN (online) 1872-7034
    ISSN 1470-160X
    DOI 10.1016/j.ecolind.2022.108585
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  4. Article ; Online: Synergistic effects in mine offsite landscapes: Predicted ecosystem shifts could exacerbate mining effects on bryophyte community structure

    Yin, Xiangbo / Martineau, Christine / Fenton, Nicole J.

    Ecological Indicators. 2022 Nov., v. 144 p.109555-

    2022  

    Abstract: Global change is shifting ecosystem type relative abundance in boreal forests, while the green energy transition results in increased mining activities around the globe. The interaction and consequent effects of these two trends on biodiversity have not ... ...

    Abstract Global change is shifting ecosystem type relative abundance in boreal forests, while the green energy transition results in increased mining activities around the globe. The interaction and consequent effects of these two trends on biodiversity have not been examined in depth. Bryophytes species can be used as indicators to measure these effects because they play key ecological roles in boreal forests. We identified and evaluated the interaction between ecosystem type (i.e., coniferous, deciduous, mixed forest and open canopy) and mining on microhabitat scale bryophyte diversity and composition in 1-km landscapes surrounding six mine sites at different stages of the mining lifecycle in the Canadian boreal forest. Irrespective of microhabitat type, the combined effects of ecosystem type and mining stage were interactive on bryophytes. Bryophyte richness and community composition were negatively affected by offsite effects of mines in only deciduous and mixed forests. The interacted effects on bryophyte richness mainly occurred on the ground r microhabitats. We also found that deciduous, mixed forests (coniferous forest as a reference) and mines had a negative impact on the abundance of feather mosses and sphagna. Furthermore, indicator species were identified for areas affected by mines (Pohlia nutans and Dicranum polysetum) and for control areas (Sphagnum angustifolium and Plagiomnium cuspidatum). Our results suggest the predicted ecosystem shifts with global changes, from coniferous to deciduous forests, could potentially increase the effects of mining on forest ecosystem resistance through the changes in bryophyte community structure. Adding microhabitats (i.e., adding coarse woody debris) near mine sites is a potential strategy to maintain species richness. Collectively, these findings advance our understanding of how mining affects biodiversity and highlight the importance of considering mine offsite landscapes in future environmental evaluations of development projects in the context of global changes.
    Keywords Plagiomnium cuspidatum ; Sphagnum ; boreal forests ; canopy ; coarse woody debris ; community structure ; coniferous forests ; forest ecosystems ; global change ; indicator species ; microhabitats ; renewable energy sources ; species richness ; Mining activities ; Climate changes ; Indirect impacts ; Epiphytes ; Taiga
    Language English
    Dates of publication 2022-11
    Publishing place Elsevier Ltd
    Document type Article ; Online
    Note Use and reproduction
    ZDB-ID 2036774-0
    ISSN 1872-7034 ; 1470-160X
    ISSN (online) 1872-7034
    ISSN 1470-160X
    DOI 10.1016/j.ecolind.2022.109555
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  5. Article: Out of site, out of mind: Changes in feather moss phyllosphere microbiota in mine offsite boreal landscapes.

    Yin, Xiangbo / Martineau, Christine / Samad, Abdul / Fenton, Nicole J

    Frontiers in microbiology

    2023  Volume 14, Page(s) 1148157

    Abstract: Plant-microbe interactions play a crucial role in maintaining biodiversity and ecological services in boreal forest biomes. Mining for minerals, and especially the emission of heavy metal-enriched dust from mine sites, is a potential threat to ... ...

    Abstract Plant-microbe interactions play a crucial role in maintaining biodiversity and ecological services in boreal forest biomes. Mining for minerals, and especially the emission of heavy metal-enriched dust from mine sites, is a potential threat to biodiversity in offsite landscapes. Understanding the impacts of mining on surrounding phyllosphere microbiota is especially lacking. To investigate this, we characterized bacterial and fungal communities in the phyllosphere of feather moss
    Language English
    Publishing date 2023-04-05
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2587354-4
    ISSN 1664-302X
    ISSN 1664-302X
    DOI 10.3389/fmicb.2023.1148157
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  6. Article: Offsite effects of mining on the frequency and abundance of five understorey plant species in western Québec (Canada)

    Boisvert, Rémi / Yin, Xiangbo / Fenton, Nicole J.

    Botany. 2021, v. 99, no. 7

    2021  

    Abstract: Although the mining industry provides minerals and metals to the global market and represents important economic opportunities, it also constitutes a major anthropogenic disturbance in the ecosystems where it takes place. However, little is known about ... ...

    Abstract Although the mining industry provides minerals and metals to the global market and represents important economic opportunities, it also constitutes a major anthropogenic disturbance in the ecosystems where it takes place. However, little is known about its offsite impacts on plant communities. We assessed the frequency and the abundance of five common boreal understorey plant species (Coptis trifolia (L.) Salisb., Cornus canadensis L., Linnaea borealis L., Lysimachia borealis (Raf.) U.Manns & Anderb., and Maianthemum canadense Desf.) at different distances around six mines in Abitibi-Témiscamingue and Nord-du-Québec (Québec). Frequency and (or) abundance of Coptis trifolia and M. canadense decreased near mines, suggesting that they might be sensitive to the loss of forest cover, particle deposition, and soil contamination induced by mining. Conversely, the frequency and abundance of Cornus canadensis increased near active mines, which indicates its resilience to the stress caused by mines and its ability to exploit the niche space left by more sensitive species. No effects on Linnaea borealis and Lysimachia borealis were observed. Our study suggests the possible presence of offsite impacts of mines on plant communities. Further studies considering enigmatic impacts should be conducted in order to develop our understanding of the broader environmental footprint of mining activity.
    Keywords Coptis ; Cornus canadensis ; Maianthemum ; Trientalis borealis ; anthropogenic activities ; botany ; ecological footprint ; forests ; soil pollution ; understory ; world markets ; Quebec
    Language English
    Size p. 449-455.
    Publishing place NRC Research Press
    Document type Article
    ZDB-ID 2467208-7
    ISSN 1916-2804 ; 1916-2790
    ISSN (online) 1916-2804
    ISSN 1916-2790
    DOI 10.1139/cjb-2020-0158
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  7. Article: Tree-related microhabitats and deadwood dynamics form a diverse and constantly changing mosaic of habitats in boreal old-growth forests

    Martin, Maxence / Fenton, Nicole J / Morin, Hubert

    Ecological indicators. 2021 Sept., v. 128

    2021  

    Abstract: Tree-related microhabitats (TreM) and deadwood are two forest attributes providing essential resources for biodiversity conservation and ecosystem services. Old-growth forests are generally defined by a high abundance and diversity of TreM and deadwood, ... ...

    Abstract Tree-related microhabitats (TreM) and deadwood are two forest attributes providing essential resources for biodiversity conservation and ecosystem services. Old-growth forests are generally defined by a high abundance and diversity of TreM and deadwood, but little is known about TreM and deadwood dynamics once the old-growth stage is reached, in particular in the boreal biome. In this context, knowledge on TreM and deadwood dynamics in old-growth forest stands is necessary to better understand how these forests contribute to biodiversity and ecosystem services. The aim of this study is thus to determine how TreM, and deadwood abundance and diversity vary within boreal old-growth forests. To reach this objective, we surveyed TreM and deadwood attributes, as well as structural and abiotic attributes, in 71 boreal old-growth forests situated in Quebec, Canada. We used hierarchical clustering analysis to identify TreM and deadwood abundance and diversity patterns in the studied stands. We identified five clusters of TreM and deadwood characteristics, which corresponded to three stages of old-growth forest succession: canopy break-up (beginning of the old-growth stage), transition old-growth stage (replacement of the first cohort by old-growth cohorts) and true old-growth stage (first cohort all or almost all gone). The peak in TreM richness and diversity was reached at the transition old-growth stage, whereas the peak for deadwood richness and diversity was reached at the true old-growth stage. Overall, true old-growth forests were defined by a combination of moderate to high TreM density and high deadwood volume, but these values significantly varied among stands depending on past secondary disturbances, stand structure and its composition (black spruce [Picea mariana Mill.] dominated vs mixed black spruce – balsam fir [Abies balsamea (L.) Mill.]). These results therefore underscore the importance of considering old-growth forests as dynamic rather than static ecosystems, as the composition of tree- and deadwood-related microhabitats in the same old-growth stand may markedly change over time. At landscape scale, these results also imply that the mosaic of habitats present in old-growth forests can vary greatly from one location to another, highlighting the importance of maintaining a diversity of old-growth forest structure and composition.
    Keywords Abies balsamea ; Picea mariana ; biodiversity ; biodiversity conservation ; canopy ; dead wood ; ecosystems ; forest succession ; landscapes ; old-growth forests ; stand structure ; Quebec
    Language English
    Dates of publication 2021-09
    Publishing place Elsevier Ltd
    Document type Article
    Note NAL-AP-2-clean
    ZDB-ID 2036774-0
    ISSN 1872-7034 ; 1470-160X
    ISSN (online) 1872-7034
    ISSN 1470-160X
    DOI 10.1016/j.ecolind.2021.107813
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  8. Article ; Online: Small but visible: Predicting rare bryophyte distribution and richness patterns using remote sensing-based ensembles of small models.

    Cerrejón, Carlos / Valeria, Osvaldo / Muñoz, Jesús / Fenton, Nicole J

    PloS one

    2022  Volume 17, Issue 1, Page(s) e0260543

    Abstract: In Canadian boreal forests, bryophytes represent an essential component of biodiversity and play a significant role in ecosystem functioning. Despite their ecological importance and sensitivity to disturbances, bryophytes are overlooked in conservation ... ...

    Abstract In Canadian boreal forests, bryophytes represent an essential component of biodiversity and play a significant role in ecosystem functioning. Despite their ecological importance and sensitivity to disturbances, bryophytes are overlooked in conservation strategies due to knowledge gaps on their distribution, which is known as the Wallacean shortfall. Rare species deserve priority attention in conservation as they are at a high risk of extinction. This study aims to elaborate predictive models of rare bryophyte species in Canadian boreal forests using remote sensing-derived predictors in an Ensemble of Small Models (ESMs) framework. We hypothesize that high ESMs-based prediction accuracy can be achieved for rare bryophyte species despite their low number of occurrences. We also assess if there is a spatial correspondence between rare and overall bryophyte richness patterns. The study area is located in western Quebec and covers 72,292 km2. We selected 52 bryophyte species with <30 occurrences from a presence-only database (214 species, 389 plots in total). ESMs were built from Random Forest and Maxent techniques using remote sensing-derived predictors related to topography and vegetation. Lee's L statistic was used to assess and map the spatial relationship between rare and overall bryophyte richness patterns. ESMs yielded poor to excellent prediction accuracy (AUC > 0.5) for 73% of the modeled species, with AUC values > 0.8 for 19 species, which confirmed our hypothesis. In fact, ESMs provided better predictions for the rarest bryophytes. Likewise, our study revealed a spatial concordance between rare and overall bryophyte richness patterns in different regions of the study area, which have important implications for conservation planning. This study demonstrates the potential of remote sensing for assessing and making predictions on inconspicuous and rare species across the landscape and lays the basis for the eventual inclusion of bryophytes into sustainable development planning.
    MeSH term(s) Biodiversity ; Bryophyta/growth & development ; Computer Simulation/statistics & numerical data ; Ecosystem ; ROC Curve ; Remote Sensing Technology/methods ; Sustainable Development ; Taiga
    Language English
    Publishing date 2022-01-06
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2267670-3
    ISSN 1932-6203 ; 1932-6203
    ISSN (online) 1932-6203
    ISSN 1932-6203
    DOI 10.1371/journal.pone.0260543
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  9. Article ; Online: Drivers of contrasting boreal understory vegetation in coniferous and broadleaf deciduous alternative states

    Rodríguez‐Rodríguez, Juanita C. / Fenton, Nicole J. / Kembel, Steven W. / Mestre, Evick / Jean, Mélanie / Bergeron, Yves

    Ecological Monographs. 2023 Aug., v. 93, no. 3 p.e1587-

    2023  

    Abstract: Alternative states defined by tree‐canopy dominance result in different ecosystem functioning and shape habitat conditions for the understory vegetation. One example in the boreal forest is the alternation between broadleaf deciduous and coniferous ... ...

    Abstract Alternative states defined by tree‐canopy dominance result in different ecosystem functioning and shape habitat conditions for the understory vegetation. One example in the boreal forest is the alternation between broadleaf deciduous and coniferous forests. Disturbances related to natural fires and human land uses have produced changes in tree‐canopy dominance in the boreal region where coniferous forests change to broadleaved forests, affecting understory community dynamics and their related ecosystem processes and functions. To analyze the factors driving changes in understory vegetation and the resistance of its vegetation to shifts between alternative states, we compared the effects of changes in the system between two contrasting boreal forest types (black spruce vs. trembling aspen) in adjacent stands with similar topoedaphic conditions. We performed a 5‐year in situ experiment using alternative states as a theoretical framework including two approaches: (1) the ecosystem approach, manipulating environmental conditions of light, litter, and nutrients in each forest type to determine the main mechanisms associated with tree‐canopy dominance that affect the diversity and composition of understory communities; and (2) the community approach, physically exchanging understory communities between alternative states, to determine their resistance under a new tree‐canopy dominance through time, as well as the resilience of the forest understory after a small‐scale disturbance. Results indicate that the understory vegetation of trembling aspen forests were resistant through time both after changes in local conditions in the ecosystem approach and in the new black spruce‐dominated alternative state in the community approach. In contrast, mosses and ericaceous plants that typically dominate the forest floor of black spruce forests were negatively affected by the physical effect of broadleaf litter addition in our ecosystem approach and they were not resistant when transplanted to trembling aspen forests in the community approach, as they decreased in abundance and were invaded by aspen understory community species over time. The understory vegetation is a key forest ecosystem driver that can contribute to maintain the resilience of the boreal system and help to preserve their ecosystem services, which is a key aspect to consider in forest management faced with the effects of climate change.
    Keywords Picea mariana ; boreal forests ; climate change ; forest ecosystems ; forest litter ; forest management ; forest types ; habitats ; humans ; understory
    Language English
    Dates of publication 2023-08
    Publishing place John Wiley & Sons, Inc.
    Document type Article ; Online
    Note JOURNAL ARTICLE
    ZDB-ID 410216-2
    ISSN 1557-7015 ; 0012-9615
    ISSN (online) 1557-7015
    ISSN 0012-9615
    DOI 10.1002/ecm.1587
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  10. Article: Towards the regeneration of brown mosses for fen restoration

    Meilleur, Sébastien / Guêné-Nanchen, Mélina / Hugron, Sandrine / Fenton, Nicole J. / Rochefort, Line

    Bryologist. 2022 Jan. 4, v. 125, no. 1

    2022  

    Abstract: A low rate of establishment in brown mosses is generally observed following large-scale restoration of fens. As brown mosses are important components in peat accumulation in fens, their low recovery rate has been a concern in the past decade. It was ... ...

    Abstract A low rate of establishment in brown mosses is generally observed following large-scale restoration of fens. As brown mosses are important components in peat accumulation in fens, their low recovery rate has been a concern in the past decade. It was suggested that the restoration method used for bogs, the Moss Layer Transfer Technique (MLTT) should be adapted for fen restoration by identifying factors limiting the establishment and recovery of brown mosses. In this study, we evaluated the regeneration potential of four common brown mosses, Aulacomnium palustre, Campylium stellatum, Scorpidium cossonii and Tomentypnum nitens, according to three factors that can have an impact during restoration: 1) distance of the fragment below the moss apex, 2) mechanical fragmentation of mosses, and 3) enhanced nutrient availability, and this, in growth chambers (within Petri dishes) and field experiments. Under controlled conditions, similar results were obtained for all four brown mosses studied: the severe fragmentation of mosses most drastically improved their regeneration potential. Phosphate fertilization, even at the lowest dose, increased moss regeneration, and brown mosses showed higher recovery in the first 3 cm below the apex. Liming only improved the regeneration of C. stellatum. However, unclear, and even contradicting results were obtained when treatments were applied in the field, where an overall very low establishment of brown mosses was observed in response to the rather prevailing adverse environmental conditions (e.g., erosion, frost heaving, low water table level). The direct application of some of our results into an adapted version of MLTT might be challenging, as it may require a certain level of meticulosity that large-scale mechanical fen restoration cannot provide.
    Keywords fens ; frost ; mosses and liverworts ; nutrient availability ; peat ; phosphates ; water table
    Language English
    Dates of publication 2022-0104
    Size p. 23-35.
    Publishing place American Bryological and Lichenological Society
    Document type Article
    ZDB-ID 2173787-3
    ISSN 1938-4378 ; 0007-2745
    ISSN (online) 1938-4378
    ISSN 0007-2745
    DOI 10.1639/0007-2745-125.1.023
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