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  1. Article ; Online: Airborne bacterial community and antibiotic resistome in the swine farming environment: Metagenomic insights into livestock relevance, pathogen hosts and public risks.

    Gao, Fang-Zhou / He, Liang-Ying / Bai, Hong / He, Lu-Xi / Zhang, Min / Chen, Zi-Yin / Liu, You-Sheng / Ying, Guang-Guo

    Environment international

    2023  Volume 172, Page(s) 107751

    Abstract: Globally extensive use of antibiotics has accelerated antimicrobial resistance (AMR) in the environment. As one of the biggest antibiotic consumers, livestock farms are hotspots in AMR prevalence, especially those in the atmosphere can transmit over long ...

    Abstract Globally extensive use of antibiotics has accelerated antimicrobial resistance (AMR) in the environment. As one of the biggest antibiotic consumers, livestock farms are hotspots in AMR prevalence, especially those in the atmosphere can transmit over long distances and pose inhalation risks to the public. Here, we collected total suspended particulates in swine farms and ambient air of an intensive swine farming area. Bacterial communities and antibiotic resistomes were analyzed using amplicon and metagenomic sequencing approaches. AMR risks and inhalation exposure to potential human-pathogenic antibiotic-resistant bacteria (HPARB) were subsequently estimated with comparison to the reported hospital samples. The results show that swine farms shaped the airborne bacterial community by increasing abundances, reducing diversities and shifting compositions. Swine feces contributed 77% of bacteria to swine farm air, and about 35% to ambient air. Airborne antibiotic resistomes in swine farms mainly conferred resistance to tetracyclines, aminoglycosides and lincosamides, and over 48% were originated from swine feces. Distinct to the hospital air, Firmicutes were dominant bacteria in swine farming environments with conditional pathogens including Clostridium, Streptococcus and Aerococcus being major hosts of antibiotic resistance genes (ARGs). Therein, genomes of S. alactolyticus carrying (transposase/recombinase-associated) ARGs and virulence factor genes were retrieved from the metagenomes of all swine feces and swine farm air samples, but they were not detected in any hospital air samples. This suggests the indication of S. alactolyticus in swine farming environments with potential hazards to human health. Swine farm air faced higher AMR risks than hospital air and swine feces. The inhalation intake of HPARB by a swine farm worker was about three orders of magnitude higher than a person who works in the hospital. Consequently, this study depicted atmospheric transmission of bacteria and antibiotic resistomes from swine feces to the environment.
    MeSH term(s) Swine ; Humans ; Animals ; Anti-Bacterial Agents/pharmacology ; Farms ; Livestock/genetics ; Genes, Bacterial ; Metagenome ; Bacteria/genetics ; Agriculture ; Drug Resistance, Bacterial/genetics
    Chemical Substances Anti-Bacterial Agents
    Language English
    Publishing date 2023-01-13
    Publishing country Netherlands
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 554791-x
    ISSN 1873-6750 ; 0160-4120
    ISSN (online) 1873-6750
    ISSN 0160-4120
    DOI 10.1016/j.envint.2023.107751
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Integrating global microbiome data into antibiotic resistance assessment in large rivers.

    Gao, Fang-Zhou / He, Liang-Ying / Liu, You-Sheng / Zhao, Jian-Liang / Zhang, Tong / Ying, Guang-Guo

    Water research

    2023  Volume 250, Page(s) 121030

    Abstract: Rivers are important in spreading antimicrobial resistance (AMR). Assessing AMR risk in large rivers is challenged by large spatial scale and numerous contamination sources. Integrating river resistome data into a global framework may help addressing ... ...

    Abstract Rivers are important in spreading antimicrobial resistance (AMR). Assessing AMR risk in large rivers is challenged by large spatial scale and numerous contamination sources. Integrating river resistome data into a global framework may help addressing this difficulty. Here, we conducted an omics-based assessment of AMR in a large river (i.e. the Pearl River in China) with global microbiome data. Results showed that antibiotic resistome in river water and sediment was more diversified than that in other rivers, with contamination levels in some river reaches higher than global baselines. Discharge of WWTP effluent and landfill waste drove AMR prevalence in the river, and the resistome level was highly associated with human and animal sources. Detection of 54 risk rank I ARGs and emerging mobilizable mcr and tet(X) highlighted AMR risk in the river reaches with high human population density and livestock pollution. Florfenicol-resistant floR therein deserved priority concerns due to its high detection frequency, dissimilar phylogenetic distance, mobilizable potential, and presence in multiple pathogens. Co-sharing of ARGs across taxonomic ranks implied their transfer potentials in the community. By comparing with global genomic data, we found that Burkholderiaceae, Enterobacteriaceae, Moraxellaceae and Pseudomonadaceae were important potential ARG-carrying bacteria in the river, and WHO priority carbapenem-resistant Enterobacteriaceae, A. baumannii and P. aeruginosa should be included in future surveillance. Collectively, the findings from this study provide an omics-benchmarked assessment strategy for public risk associated with AMR in large rivers.
    MeSH term(s) Animals ; Humans ; Genes, Bacterial ; Rivers/microbiology ; Phylogeny ; Drug Resistance, Microbial/genetics ; Microbiota ; Anti-Bacterial Agents/pharmacology ; Pseudomonas aeruginosa
    Chemical Substances Anti-Bacterial Agents
    Language English
    Publishing date 2023-12-17
    Publishing country England
    Document type Journal Article
    ZDB-ID 202613-2
    ISSN 1879-2448 ; 0043-1354
    ISSN (online) 1879-2448
    ISSN 0043-1354
    DOI 10.1016/j.watres.2023.121030
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Antibiotics in soil and water: Occurrence, fate, and risk

    Jia, Wei-Li / Song, Chao / He, Liang-Ying / Wang, Ben / Gao, Fang-Zhou / Zhang, Min / Ying, Guang-Guo

    Current Opinion in Environmental Science & Health. 2022 Dec. 29, p.100437-

    2022  , Page(s) 100437–

    Abstract: Due to the mass production and extensive use in clinical application and livestock breeding, antibiotics have been detected frequently in soil and water, where a range of abiotic and biotic processes can jointly determine their environmental fate. The ... ...

    Abstract Due to the mass production and extensive use in clinical application and livestock breeding, antibiotics have been detected frequently in soil and water, where a range of abiotic and biotic processes can jointly determine their environmental fate. The continuous accumulation of antibiotics in the environment has raised great concerns because both the residual antibiotics and their transformation products (TPs) could pose potential risks to the ecosystem and human health. Herein, based on summarizing and analyzing the literature in recent three years, we review the occurrence, adsorption and degradation processes of antibiotics in soil and water. Furthermore, the risks associated with environmental toxicity, antibiotic resistance triggered by both antibiotics and TPs, as well as antibiotic resistance genes (ARGs) through food chains are also addressed. Finally, future research perspectives are proposed including plant uptake of antibiotics and ARGs, TPs and their risks associated with food chains.
    Keywords adsorption ; antibiotic resistance ; ecosystems ; ecotoxicology ; environmental fate ; human health ; livestock ; risk ; soil ; Antibiotics ; Fate ; Transformation products
    Language English
    Dates of publication 2022-1229
    Publishing place Elsevier B.V.
    Document type Article ; Online
    Note Pre-press version
    ISSN 2468-5844
    DOI 10.1016/j.coesh.2022.100437
    Database NAL-Catalogue (AGRICOLA)

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  4. Article ; Online: The azole biocide climbazole induces oxidative stress, inflammation, and apoptosis in fish gut.

    Lu, Zhi-Jie / Shi, Wen-Jun / Ma, Dong-Dong / Zhang, Jin-Ge / Long, Xiao-Bing / Li, Si-Ying / Gao, Fang-Zhou / Zhang, Qian-Qian / Ying, Guang-Guo

    The Science of the total environment

    2024  Volume 923, Page(s) 171475

    Abstract: Climbazole is an azole biocide that has been widely used in formulations of personal care products. Climbazole can cause developmental toxicity and endocrine disruption as well as gut disturbance in aquatic organisms. However, the mechanisms behind gut ... ...

    Abstract Climbazole is an azole biocide that has been widely used in formulations of personal care products. Climbazole can cause developmental toxicity and endocrine disruption as well as gut disturbance in aquatic organisms. However, the mechanisms behind gut toxicity induced by climbazole still remain largely unclear in fish. Here, we evaluate the gut effects by exposing grass carp (Ctenopharyngodon idella) to climbazole at levels ranging from 0.2 to 20 μg/L for 42 days by evaluating gene transcription and expression, biochemical analyses, correlation network analysis, and molecular docking. Results showed that climbazole exposure increased cyp1a mRNA expression and ROS level in the three treatment groups. Climbazole also inhibited Nrf2 and Keap1 transcripts as well as proteins, and suppressed the transcript levels of their subordinate antioxidant molecules (cat, sod, and ho-1), increasing oxidative stress. Additionally, climbazole enhanced NF-κB and iκBα transcripts and proteins, and the transcripts of NF-κB downstream pro-inflammatory factors (tnfα, and il-1β/6/8), leading to inflammation. Climbazole increased pro-apoptosis-related genes (fadd, bad1, and caspase3), and decreased anti-apoptosis-associated genes (bcl2, and bcl-xl), suggesting a direct reaction to apoptosis. The molecular docking data showed that climbazole could form stable hydrogen bonds with CYP1A. Mechanistically, our findings suggested that climbazole can induce inflammation and oxidative stress through CYP450s/ROS/Nrf2/NF-κB pathways, resulting in cell apoptosis in the gut of grass carp.
    MeSH term(s) Animals ; Dietary Supplements/analysis ; Diet ; NF-kappa B ; Kelch-Like ECH-Associated Protein 1/metabolism ; Immunity, Innate ; Azoles/toxicity ; NF-E2-Related Factor 2/metabolism ; Molecular Docking Simulation ; Reactive Oxygen Species/metabolism ; Signal Transduction ; Fish Proteins/genetics ; Fish Proteins/metabolism ; Inflammation/chemically induced ; Inflammation/veterinary ; Oxidative Stress ; Apoptosis ; Carps/metabolism ; Imidazoles
    Chemical Substances NF-kappa B ; climbazole (9N42CW7I54) ; Kelch-Like ECH-Associated Protein 1 ; Azoles ; NF-E2-Related Factor 2 ; Reactive Oxygen Species ; Fish Proteins ; Imidazoles
    Language English
    Publishing date 2024-03-06
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 121506-1
    ISSN 1879-1026 ; 0048-9697
    ISSN (online) 1879-1026
    ISSN 0048-9697
    DOI 10.1016/j.scitotenv.2024.171475
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Airborne antibiotic resistome and microbiome in pharmaceutical factories.

    Bai, Hong / He, Liang-Ying / Gao, Fang-Zhou / Yao, Kai-Sheng / Zhang, Min / Qiao, Lu-Kai / Chen, Zi-Yin / He, Lu-Xi / Liu, You-Sheng / Zhao, Jian-Liang / Ying, Guang-Guo

    Environment international

    2024  Volume 186, Page(s) 108639

    Abstract: Antimicrobial resistance is considered to be one of the biggest public health problems, and airborne transmission is an important but under-appreciated pathway for the spread of antibiotic resistance genes (ARGs) in the environment. Previous research has ...

    Abstract Antimicrobial resistance is considered to be one of the biggest public health problems, and airborne transmission is an important but under-appreciated pathway for the spread of antibiotic resistance genes (ARGs) in the environment. Previous research has shown pharmaceutical factories to be a major source of ARGs and antibiotic resistant bacteria (ARB) in the surrounding receiving water and soil environments. Pharmaceutical factories are hotspots of antibiotic resistance, but the atmospheric transmission and its environmental risk remain more concerns. Here, we conducted a metagenomic investigation into the airborne microbiome and resistome in three pharmaceutical factories in China. Soil (average: 38.45%) and wastewater (average: 28.53%) were major contributors of airborne resistome. ARGs (vanR/vanS, bla
    MeSH term(s) Microbiota/genetics ; Microbiota/drug effects ; China ; Air Microbiology ; Anti-Bacterial Agents/pharmacology ; Wastewater/microbiology ; Bacteria/genetics ; Bacteria/drug effects ; Drug Resistance, Microbial/genetics ; Drug Resistance, Bacterial/genetics
    Chemical Substances Anti-Bacterial Agents ; Wastewater
    Language English
    Publishing date 2024-04-07
    Publishing country Netherlands
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 554791-x
    ISSN 1873-6750 ; 0160-4120
    ISSN (online) 1873-6750
    ISSN 0160-4120
    DOI 10.1016/j.envint.2024.108639
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Antibiotic resistome in landfill leachate and impact on groundwater.

    Jia, Wei-Li / Zhang, Min / Gao, Fang-Zhou / Bai, Hong / He, Lu-Xi / He, Liang-Ying / Liu, Ting / Han, Yu / Ying, Guang-Guo

    The Science of the total environment

    2024  Volume 927, Page(s) 171991

    Abstract: Landfill leachate is a hotspot in antibiotic resistance development. However, little is known about antibiotic resistome and host pathogens in leachate and their effects on surrounding groundwater. Here, metagenomic sequencing was used to explore ... ...

    Abstract Landfill leachate is a hotspot in antibiotic resistance development. However, little is known about antibiotic resistome and host pathogens in leachate and their effects on surrounding groundwater. Here, metagenomic sequencing was used to explore profiles, host bacteria, environmental risks and influencing factors of antibiotic resistome in raw and treated leachate and surrounding groundwater of three landfills. Results showed detection of a total of 324 antibiotic resistance genes (ARGs). The ARGs conferring resistance to multidrug (8.8 %-25.7 %), aminoglycoside (13.1 %-39.2 %), sulfonamide (10.0 %-20.9 %), tetracycline (5.7 %-34.4 %) and macrolide-lincosamide-streptogramin (MLS, 5.3 %-29.5 %) were dominant in raw leachate, while multidrug resistance genes were the major ARGs in treated leachate (64.1 %-83.0 %) and groundwater (28.7 %-76.6 %). Source tracking analysis suggests non-negligible influence of leachate on the ARGs in groundwater. The pathogens including Acinetobacter pittii, Pseudomonas stutzeri and P. alcaligenes were the major ARG-carrying hosts. Variance partitioning analysis indicates that the microbial community, abiotic variables and their interaction contributed most to the antibiotic resistance development. Our results shed light on the dissemination and driving mechanisms of ARGs from leachate to the groundwater, indicating that a comprehensive risk assessment and efficient treatment approaches are needed to deal with ARGs in landfill leachate and nearby groundwater. ENVIRONMENTAL IMPLICATIONS: Antibiotic resistance genes are found abundant in the landfill sites, and these genes could be disseminated into groundwater via leaching of wastewater and infiltration of leachate. This results in deterioration of groundwater quality and human health risks posed by these ARGs and related pathogens. Thus measures should be taken to minimize potential negative impacts of landfills on the surrounding environment.
    MeSH term(s) Groundwater/microbiology ; Groundwater/chemistry ; Water Pollutants, Chemical/analysis ; Waste Disposal Facilities ; Drug Resistance, Microbial/genetics ; Anti-Bacterial Agents/pharmacology ; Environmental Monitoring ; Bacteria/drug effects ; Bacteria/genetics
    Chemical Substances Water Pollutants, Chemical ; Anti-Bacterial Agents
    Language English
    Publishing date 2024-03-26
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 121506-1
    ISSN 1879-1026 ; 0048-9697
    ISSN (online) 1879-1026
    ISSN 0048-9697
    DOI 10.1016/j.scitotenv.2024.171991
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: An azole fungicide climbazole damages the gut-brain axis in the grass carp.

    Lu, Zhi-Jie / Shi, Wen-Jun / Gao, Fang-Zhou / Ma, Dong-Dong / Zhang, Jin-Ge / Li, Si-Ying / Long, Xiao-Bing / Zhang, Qian-Qian / Ying, Guang-Guo

    Journal of hazardous materials

    2024  Volume 465, Page(s) 133463

    Abstract: Azole antifungal climbazole has frequently been detected in aquatic environments and shows various effects in fish. However, the underlying mechanism of toxicity through the gut-brain axis of climbazole is unclear. Here, we investigated the effects of ... ...

    Abstract Azole antifungal climbazole has frequently been detected in aquatic environments and shows various effects in fish. However, the underlying mechanism of toxicity through the gut-brain axis of climbazole is unclear. Here, we investigated the effects of climbazole at environmental concentrations on the microbiota-intestine-brain axis in grass carp via histopathological observation, gene expression and biochemical analyses, and high-throughput sequencing of the 16 S rRNA. Results showed that exposure to 0.2 to 20 μg/L climbazole for 42 days significantly disrupted gut microbiota and caused brain neurotoxicity in grass carp. In this study, there was an alteration in the phylum and genus compositions in the gut microbiota following climbazole treatment, including reducing Fusobacteria (e.g., Cetobacterium) and increasing Actinobacteria (e.g., Nocardia). Climbazole disrupted intestinal microbial abundance, leading to increased levels of lipopolysaccharide and tumor necrosis factor-alpha in the gut, serum, and brain. They passed through the impaired intestinal barrier into the circulation and caused the destruction of the blood-brain barrier through the gut-brain axis, allowing them into the brain. In the brain, climbazole activated the nuclear factor kappaB pathway to increase inflammation, and suppressed the E2-related factor 2 pathway to produce oxidative damage, resulting in apoptosis, which promoted neuroinflammation and neuronal death. Besides, our results suggested that this neurotoxicity was caused by the breakdown of the microbiota-gut-brain axis, mediated by reduced concentrations of dopamine, short chain fatty acids, and intestinal microbial activity induced by climbazole.
    MeSH term(s) Animals ; Brain-Gut Axis ; Fungicides, Industrial ; Azoles ; Carps ; Imidazoles
    Chemical Substances climbazole (9N42CW7I54) ; Fungicides, Industrial ; Azoles ; Imidazoles
    Language English
    Publishing date 2024-01-10
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 1491302-1
    ISSN 1873-3336 ; 0304-3894
    ISSN (online) 1873-3336
    ISSN 0304-3894
    DOI 10.1016/j.jhazmat.2024.133463
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article: [Factor Analysis of Disinfection Byproduct Formation in Drinking Water Distribution Systems Through the Bayesian Network].

    Jiang, Shan-Shan / Wang, Zhen-Yu / Gao, Quan / Yang, Yuan-Yuan / Gao, Fang-Zhou / Hua, Pei / Ying, Guang-Guo

    Huan jing ke xue= Huanjing kexue

    2022  Volume 43, Issue 3, Page(s) 1512–1520

    Abstract: Disinfection byproducts (DBPs) in drinking water distribution systems are affected by multi-factors, such as basic water quality parameters, microbial community structures, and residual organic pollutants that cannot be removed by the water treatment ... ...

    Abstract Disinfection byproducts (DBPs) in drinking water distribution systems are affected by multi-factors, such as basic water quality parameters, microbial community structures, and residual organic pollutants that cannot be removed by the water treatment process. The relationship between the above-mentioned factors that forms a complicated network structure, which causes the dominating factor that affects DBPs formation unclear. This study investigated the water quality in regional tap water in January-February 2021. Trihalomethanes were determined using P&T-GC-MS, and antibiotics and nitrosamines were determined using UPLC-MS/MS. Microbial communities were determined using Illumina 16S rRNA gene sequencing. A Bayesian network was constructed to evaluate the intercorrelation between the factors. Three species of trihalomethanes, six species of nitrosamines, 23 types of antibiotics, and 236 OTUs were detected in the tap water. The mass concentrations of trihalomethanes, nitrosamines, and antibiotics were 18.33-32.09 μg·L
    MeSH term(s) Bayes Theorem ; Chromatography, Liquid ; Disinfectants/analysis ; Disinfection/methods ; Drinking Water/analysis ; Factor Analysis, Statistical ; Halogenation ; RNA, Ribosomal, 16S ; Tandem Mass Spectrometry ; Trihalomethanes ; Water Pollutants, Chemical/analysis ; Water Purification/methods
    Chemical Substances Disinfectants ; Drinking Water ; RNA, Ribosomal, 16S ; Trihalomethanes ; Water Pollutants, Chemical
    Language Chinese
    Publishing date 2022-03-07
    Publishing country China
    Document type Journal Article
    ISSN 0250-3301
    ISSN 0250-3301
    DOI 10.13227/j.hjkx.202106138
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article: Spread of airborne antibiotic resistance from animal farms to the environment: Dispersal pattern and exposure risk

    Bai, Hong / He, Liang-Ying / Wu, Dai-Ling / Gao, Fang-Zhou / Zhang, Min / Zou, Hai-Yan / Yao, Mao-Sheng / Ying, Guang-Guo

    Environment international. 2022 Jan., v. 158

    2022  

    Abstract: Animal farms have been considered as the critical reservoir of antibiotic resistance genes (ARGs) and antibiotic resistant bacteria (ARB). Spread of antibiotic resistance from animal farms to the surrounding environments via aerosols has become a growing ...

    Abstract Animal farms have been considered as the critical reservoir of antibiotic resistance genes (ARGs) and antibiotic resistant bacteria (ARB). Spread of antibiotic resistance from animal farms to the surrounding environments via aerosols has become a growing concern. Here we investigated the dispersal pattern and exposure risk of airborne ARGs (especially in zoonotic pathogens) in the environment of chicken and dairy farms. Aerosol, dust and animal feces samples were collected from the livestock houses and surrounding environments (upwind and downwind areas) for assessing ARG profiles. Antibiotic resistance phenotype and genotype of airborne Staphylococcus spp. was especially analyzed to reveal the exposure risk of airborne ARGs. Results showed that airborne ARGs were detected from upwind (50 m/100 m) and downwind (50 m/100 m/150 m) air environment, wherein at least 30% of bacterial taxa dispersed from the animal houses. Moreover, atmospheric dispersion modeling showed that airborne ARGs can disperse from the animal houses to a distance of 10 km along the wind direction. Clinically important pathogens were identified in airborne culturable bacteria. Genus of Staphylococcus, Sphingomonas and Acinetobacter were potential bacterial host of airborne ARGs. Airborne Staphylococcus spp. were isolated from the environment of chicken farm (n = 148) and dairy farm (n = 87). It is notable that all isolates from chicken-related environment were multidrug-resistance (>3 clinical-relevant antibiotics), with more than 80% of them carrying methicillin resistance gene (mecA) and associated ARGs and MGEs. Presence of numerous ARGs and diverse pathogens in dust from animal houses and the downwind residential areas indicated the accumulation of animal feces origin ARGs in bioaerosols. Employees and local residents in the chick farming environment are exposed to chicken originated ARGs and multidrug resistant Staphylococcus spp. via inhalation. This study highlights the potential exposure risks of airborne ARGs and antibiotic resistant pathogens to human health.
    Keywords Acinetobacter ; Sphingomonas ; Staphylococcus ; air ; antibiotic resistance ; bioaerosols ; breathing ; chickens ; chicks ; dairy farming ; dust ; environment ; farms ; feces ; genotype ; human health ; methicillin ; multiple drug resistance ; phenotype ; risk ; wind direction
    Language English
    Dates of publication 2022-01
    Publishing place Elsevier Ltd
    Document type Article
    ZDB-ID 554791-x
    ISSN 1873-6750 ; 0160-4120
    ISSN (online) 1873-6750
    ISSN 0160-4120
    DOI 10.1016/j.envint.2021.106927
    Database NAL-Catalogue (AGRICOLA)

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  10. Article ; Online: Swine farm groundwater is a hidden hotspot for antibiotic-resistant pathogenic Acinetobacter.

    Gao, Fang-Zhou / He, Liang-Ying / Chen, Xin / Chen, Jing-Liang / Yi, Xinzhu / He, Lu-Xi / Huang, Xin-Yi / Chen, Zi-Yin / Bai, Hong / Zhang, Min / Liu, You-Sheng / Ying, Guang-Guo

    ISME communications

    2023  Volume 3, Issue 1, Page(s) 34

    Abstract: Acinetobacter is present in the livestock environment, but little is known about their antibiotic resistance and pathogenic species in the farm groundwater. Here we investigated antibiotic resistance of Acinetobacter in the swine farm groundwater (JZPG) ... ...

    Abstract Acinetobacter is present in the livestock environment, but little is known about their antibiotic resistance and pathogenic species in the farm groundwater. Here we investigated antibiotic resistance of Acinetobacter in the swine farm groundwater (JZPG) and residential groundwater (JZG) of a swine farming village, in comparison to a nearby (3.5 km) non-farming village (WTG) using metagenomic and culture-based approaches. Results showed that the abundance of antibiotic resistome in some JZG and all JZPG (~3.4 copies/16S rRNA gene) was higher than that in WTG (~0.7 copies/16S rRNA gene), indicating the influence of farming activities on both groundwater types. Acinetobacter accounted for ~95.7% of the bacteria in JZG and JZPG, but only ~8.0% in WTG. They were potential hosts of ~95.6% of the resistome in farm affected groundwater, which includes 99 ARG subtypes against 23 antibiotic classes. These ARGs were associated with diverse intrinsic and acquired resistance mechanisms, and the predominant ARGs were tetracyclines and fluoroquinolones resistance genes. Metagenomic binning analysis elucidated that non-baumannii Acinetobacter including A. oleivorans, A. beijerinckii, A. seifertii, A. bereziniae and A. modestus might pose environmental risks because of multidrug resistance, pathogenicity and massive existence in the groundwater. Antibiotic susceptibility tests showed that the isolated strains were resistant to multiple antibiotics including sulfamethoxazole (resistance ratio: 96.2%), levofloxacin (42.5%), gatifloxacin (39.0%), ciprofloxacin (32.6%), tetracycline (32.0%), doxycycline (29.0%) and ampicillin (12.0%) as well as last-resort polymyxin B (31.7%), colistin (24.1%) and tigecycline (4.1%). The findings highlight potential prevalence of groundwater-borne antibiotic-resistant pathogenic Acinetobacter in the livestock environment.
    Language English
    Publishing date 2023-04-20
    Publishing country England
    Document type Journal Article
    ISSN 2730-6151
    ISSN (online) 2730-6151
    DOI 10.1038/s43705-023-00240-w
    Database MEDical Literature Analysis and Retrieval System OnLINE

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