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  1. Article: NK cells with decreased expression of multiple activating receptors is a dominant phenotype in pediatric patients with acute lymphoblastic leukemia.

    Valenzuela-Vázquez, Lucero / Nuñez-Enriquez, Juan Carlos / Sánchez-Herrera, Jacqueline / Medina-Sanson, Aurora / Pérez-Saldivar, María Luisa / Jiménez-Hernández, Elva / Martiín-Trejo, Jorge Alfonso / Del Campo-Martínez, María de Los Ángeles / Flores-Lujano, Janet / Amador-Sánchez, Raquel / Mora-Ríos, Félix Gustavo / Peñaloza-González, José Gabriel / Duarte-Rodríguez, David Aldebarán / Torres-Nava, José Refugio / Espinosa-Elizondo, Rosa Martha / Cortés-Herrera, Beatriz / Flores-Villegas, Luz Victoria / Merino-Pasaye, Laura Elizabeth / Almeida-Hernández, Carolina /
    Ramírez-Colorado, Rosario / Solís-Labastida, Karina Anastacia / Medrano-López, Francisco / Pérez-Gómez, Jessica Arleet / Velázquez-Aviña, Martha Margarita / Martínez-Ríos, Annel / Aguilar-De Los Santos, Antonio / Santillán-Juárez, Jessica Denisse / Gurrola-Silva, Alma / García-Velázquez, Alejandra Jimena / Mata-Rocha, Minerva / Hernández-Echáurregui, Gabriela Alicia / Sepúlveda-Robles, Omar Alejandro / Rosas-Vargas, Haydeé / Mancilla-Herrera, Ismael / Jimenez-Morales, Silvia / Hidalgo-Miranda, Alfredo / Martinez-Duncker, Ivan / Waight, Jeremy D / Hance, Kenneth W / Madauss, Kevin P / Mejía-Aranguré, Juan Manuel / Cruz-Munoz, Mario Ernesto

    Frontiers in oncology

    2022  Volume 12, Page(s) 1023510

    Abstract: NK cells have unique attributes to react towards cells undergoing malignant transformation or viral infection. This reactivity is regulated by activating or inhibitory germline encoded receptors. An impaired NK cell function may result from an aberrant ... ...

    Abstract NK cells have unique attributes to react towards cells undergoing malignant transformation or viral infection. This reactivity is regulated by activating or inhibitory germline encoded receptors. An impaired NK cell function may result from an aberrant expression of such receptors, a condition often seen in patients with hematological cancers. Acute lymphoblastic leukemia (ALL) is the most common pediatric cancer worldwide and NK cells have emerged as crucial targets for developing immunotherapies. However, there are important gaps concerning the phenotype and behavior of NK cells during emergence of ALL. In this study we analyze the phenotype and function of NK cells from peripheral blood in pediatric patients with ALL at diagnosis. Our results showed that NK cells exhibited an altered phenotype highlighted by a significant reduction in the overall expression and percent representation of activating receptors compared to age-matched controls. No significant differences were found for the expression of inhibitory receptors. Moreover, NK cells with a concurrent reduced expression in various activating receptors, was the dominant phenotype among patients. An alteration in the relative frequencies of NK cells expressing NKG2A and CD57 within the mature NK cell pool was also observed. In addition, NK cells from patients displayed a significant reduction in the ability to sustain antibody-dependent cellular cytotoxicity (ADCC). Finally, an aberrant expression of activating receptors is associated with the phenomenon of leukemia during childhood.
    Language English
    Publishing date 2022-11-07
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2649216-7
    ISSN 2234-943X
    ISSN 2234-943X
    DOI 10.3389/fonc.2022.1023510
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Transcriptome Analysis Identifies LINC00152 as a Biomarker of Early Relapse and Mortality in Acute Lymphoblastic Leukemia.

    Bárcenas-López, Diego Alberto / Núñez-Enríquez, Juan Carlos / Hidalgo-Miranda, Alfredo / Beltrán-Anaya, Fredy Omar / May-Hau, Didier Ismael / Jiménez-Hernández, Elva / Bekker-Méndez, Vilma Carolina / Flores-Lujano, Janet / Medina-Sansón, Aurora / Tamez-Gómez, Edna Liliana / López-García, Víctor Hugo / Lara-Ramos, José Ramón / Núñez-Villegas, Nora Nancy / Peñaloza-González, José Gabriel / Flores-Villegas, Luz Victoria / Amador-Sánchez, Raquel / Espinosa-Elizondo, Rosa Martha / Martín-Trejo, Jorge Alfonso / Velázquez-Aviña, Martha Margarita /
    Merino-Pasaye, Laura Elizabeth / Pérez-Saldívar, María Luisa / Duarte-Rodríguez, David Aldebarán / Torres-Nava, José Refugio / Cortés-Herrera, Beatriz / Solís-Labastida, Karina Anastacia / González-Ávila, Ana Itamar / Santillán-Juárez, Jessica Denisse / García-Velázquez, Alejandra Jimena / Rosas-Vargas, Haydee / Mata-Rocha, Minerva / Sepúlveda-Robles, Omar Alejandro / Mejía-Aranguré, Juan Manuel / Jiménez-Morales, Silvia

    Genes

    2020  Volume 11, Issue 3

    Abstract: Evidence showing the role of long non-coding RNAs (lncRNAs) in leukemogenesis have emerged in the last decade. It has been proposed that these genes can be used as diagnosis and/or prognosis biomarkers in childhood acute lymphoblastic leukemia (ALL). To ... ...

    Abstract Evidence showing the role of long non-coding RNAs (lncRNAs) in leukemogenesis have emerged in the last decade. It has been proposed that these genes can be used as diagnosis and/or prognosis biomarkers in childhood acute lymphoblastic leukemia (ALL). To know if lncRNAs are associated with early relapse and early mortality, a microarray-based gene expression analysis in children with B-lineage ALL (B-ALL) was conducted. Cox regression analyses were performed. Hazard ratios (HR) and 95% confidence intervals (95% CI) were calculated. LINC00152 and LINC01013 were among the most differentially expressed genes in patients with early relapse and early mortality. For
    MeSH term(s) Biomarkers, Tumor/genetics ; Cell Line, Tumor ; Cell Proliferation/genetics ; Child ; Child, Preschool ; Female ; Gene Expression Profiling ; Gene Expression Regulation, Neoplastic/genetics ; Humans ; Infant ; Male ; Microarray Analysis/methods ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/genetics ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/pathology ; RNA, Long Noncoding/genetics ; Recurrence ; Transcriptome/genetics
    Chemical Substances Biomarkers, Tumor ; RNA, Long Noncoding ; long non-coding RNA Linc00152, human
    Language English
    Publishing date 2020-03-13
    Publishing country Switzerland
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2527218-4
    ISSN 2073-4425 ; 2073-4425
    ISSN (online) 2073-4425
    ISSN 2073-4425
    DOI 10.3390/genes11030302
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article: Transcriptome Analysis Identifies LINC00152 as a Biomarker of Early Relapse and Mortality in Acute Lymphoblastic Leukemia

    Bárcenas-López, Diego Alberto / Núñez-Enríquez, Juan Carlos / Hidalgo-Miranda, Alfredo / Beltrán-Anaya, Fredy Omar / May-Hau, Didier Ismael / Jiménez-Hernández, Elva / Bekker-Méndez, Vilma Carolina / Flores-Lujano, Janet / Medina-Sansón, Aurora / Tamez-Gómez, Edna Liliana / López-García, Víctor Hugo / Lara-Ramos, José Ramón / Núñez-Villegas, Nora Nancy / Peñaloza-González, José Gabriel / Flores-Villegas, Luz Victoria / Amador-Sánchez, Raquel / Espinosa-Elizondo, Rosa Martha / Martín-Trejo, Jorge Alfonso / Velázquez-Aviña, Martha Margarita /
    Merino-Pasaye, Laura Elizabeth / Pérez-Saldívar, María Luisa / Duarte-Rodríguez, David Aldebarán / Torres-Nava, José Refugio / Cortés-Herrera, Beatriz / Solís-Labastida, Karina Anastacia / González-Ávila, Ana Itamar / Santillán-Juárez, Jessica Denisse / García-Velázquez, Alejandra Jimena / Rosas-Vargas, Haydee / Mata-Rocha, Minerva / Sepúlveda-Robles, Omar Alejandro / Mejía-Aranguré, Juan Manuel / Jiménez-Morales, Silvia

    Genes. 2020 Mar. 13, v. 11, no. 3

    2020  

    Abstract: Evidence showing the role of long non-coding RNAs (lncRNAs) in leukemogenesis have emerged in the last decade. It has been proposed that these genes can be used as diagnosis and/or prognosis biomarkers in childhood acute lymphoblastic leukemia (ALL). To ... ...

    Abstract Evidence showing the role of long non-coding RNAs (lncRNAs) in leukemogenesis have emerged in the last decade. It has been proposed that these genes can be used as diagnosis and/or prognosis biomarkers in childhood acute lymphoblastic leukemia (ALL). To know if lncRNAs are associated with early relapse and early mortality, a microarray-based gene expression analysis in children with B-lineage ALL (B-ALL) was conducted. Cox regression analyses were performed. Hazard ratios (HR) and 95% confidence intervals (95% CI) were calculated. LINC00152 and LINC01013 were among the most differentially expressed genes in patients with early relapse and early mortality. For LINC00152 high expression, the risks of relapse and death were HR: 4.16 (95% CI: 1.46–11.86) and HR: 1.99 (95% CI: 0.66–6.02), respectively; for LINC01013 low expression, the risks of relapse and death were HR: 3.03 (95% CI: 1.14–8.05) and HR: 6.87 (95% CI: 1.50–31.48), respectively. These results were adjusted by NCI risk criteria and chemotherapy regimen. The lncRNA–mRNA co-expression analysis showed that LINC00152 potentially regulates genes involved in cell substrate adhesion and peptidyl–tyrosine autophosphorylation biological processes. The results of the present study point out that LINC00152 could be a potential biomarker of relapse in children with B-ALL.
    Keywords biomarkers ; childhood ; children ; confidence interval ; drug therapy ; gene expression ; gene expression regulation ; genes ; hazard ratio ; lymphocytic leukemia ; microarray technology ; mortality ; non-coding RNA ; patients ; prognosis ; protein phosphorylation ; regression analysis ; relapse ; risk ; transcriptomics
    Language English
    Dates of publication 2020-0313
    Publishing place Multidisciplinary Digital Publishing Institute
    Document type Article
    ZDB-ID 2527218-4
    ISSN 2073-4425
    ISSN 2073-4425
    DOI 10.3390/genes11030302
    Database NAL-Catalogue (AGRICOLA)

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  4. Article ; Online: Gene Expression Profiling of Acute Lymphoblastic Leukemia in Children with Very Early Relapse.

    Núñez-Enríquez, Juan Carlos / Bárcenas-López, Diego Alberto / Hidalgo-Miranda, Alfredo / Jiménez-Hernández, Elva / Bekker-Méndez, Vilma Carolina / Flores-Lujano, Janet / Solis-Labastida, Karina Anastacia / Martínez-Morales, Gabriela Bibiana / Sánchez-Muñoz, Fausto / Espinoza-Hernández, Laura Eugenia / Velázquez-Aviña, Martha Margarita / Merino-Pasaye, Laura Elizabeth / García Velázquez, Alejandra Jimena / Pérez-Saldívar, María Luisa / Mojica-Espinoza, Raúl / Ramírez-Bello, Julián / Jiménez-Morales, Silvia / Mejía-Aranguré, Juan Manuel

    Archives of medical research

    2017  Volume 47, Issue 8, Page(s) 644–655

    Abstract: Background and aims: Acute lymphoblastic leukemia (ALL) is the most common childhood cancer worldwide. Mexican patients have high mortality rates, low frequency of good prognosis biomarkers (i.e., ETV6-RUNX1) and a high proportion is classified at the ... ...

    Abstract Background and aims: Acute lymphoblastic leukemia (ALL) is the most common childhood cancer worldwide. Mexican patients have high mortality rates, low frequency of good prognosis biomarkers (i.e., ETV6-RUNX1) and a high proportion is classified at the time of diagnosis with a high risk to relapse according to clinical features. In addition, very early relapses are more frequently observed than in other populations. The aim of the study was to identify new potential biomarkers associated with very early relapse in Mexican ALL children through transcriptome analysis.
    Methods: Microarray gene expression profiling on bone marrow samples of 54 pediatric ALL patients, collected at time of diagnosis and/or at relapse, was performed. Eleven patients presented relapse within the first 18 months after diagnosis. Affymetrix Human Transcriptome Array 2.0 (HTA 2.0) was used to perform gene expression analysis. Annotation and functional enrichment analyses were carried out using Gene Ontology, KEGG pathway analysis and Ingenuity Pathway Analysis tools.
    Results: BLVRB, ZCCHC7, PAX5, EBF1, TMOD1 and BLNK were differentially expressed (fold-change >2.0 and p value <0.01) between relapsed and non-relapsed patients. Functional analysis of abnormally expressed genes revealed their important role in cellular processes related to the development of hematological diseases, cancer, cell death and survival and in cell-to-cell signaling interaction.
    Conclusions: Our data support previous findings showing the relevance of PAX5, EBF1 and ZCCHC7 as potential biomarkers to identify a subgroup of ALL children in high risk to relapse.
    MeSH term(s) Adolescent ; Biomarkers, Tumor/genetics ; Biomarkers, Tumor/metabolism ; Bone Marrow/metabolism ; Child ; Child, Preschool ; Cohort Studies ; Female ; Gene Expression Profiling ; Humans ; Infant ; Male ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/diagnosis ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/genetics ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/metabolism ; Prognosis ; Recurrence
    Chemical Substances Biomarkers, Tumor
    Language English
    Publishing date 2017-05-04
    Publishing country United States
    Document type Journal Article ; Multicenter Study ; Research Support, Non-U.S. Gov't
    ZDB-ID 1156844-6
    ISSN 1873-5487 ; 0188-4409 ; 0188-0128
    ISSN (online) 1873-5487
    ISSN 0188-4409 ; 0188-0128
    DOI 10.1016/j.arcmed.2016.12.005
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Overweight and obesity as predictors of early mortality in Mexican children with acute lymphoblastic leukemia: a multicenter cohort study.

    Núñez-Enríquez, Juan Carlos / Gil-Hernández, Ana Elena / Jiménez-Hernández, Elva / Fajardo-Gutiérrez, Arturo / Medina-Sansón, Aurora / Flores-Lujano, Janet / Espinoza-Hernández, Laura Eugenia / Duarte-Rodríguez, David Aldebarán / Amador-Sánchez, Raquel / Peñaloza-González, José Gabriel / Torres-Nava, José Refugio / Espinosa-Elizondo, Rosa Martha / Flores-Villegas, Luz Victoria / Merino-Pasaye, Laura Elizabeth / Pérez-Saldivar, María Luisa / Dorantes-Acosta, Elisa María / Cortés-Herrera, Beatriz / Solis-Labastida, Karina Anastacia / Núñez-Villegas, Nora Nancy /
    Velázquez-Aviña, Martha Margarita / Rangel-López, Angélica / González-Ávila, Ana Itamar / Santillán-Juárez, Jessica Denisse / García-Velázquez, Alejandra Jimena / Jiménez-Morales, Silvia / Bekker-Méndez, Vilma Carolina / Rosas-Vargas, Haydee / Mata-Rocha, Minerva / Sepúlveda-Robles, Omar Alejandro / Martín-Trejo, Jorge Alfonso / Mejía-Aranguré, Juan Manuel

    BMC cancer

    2019  Volume 19, Issue 1, Page(s) 708

    Abstract: Background: Mexico City has one of the highest incidences and mortality rates of acute lymphoblastic leukemia (ALL) in the world and a high frequency of early relapses (17%) and early mortality (15%). Otherwise, childhood overweight and obesity are ... ...

    Abstract Background: Mexico City has one of the highest incidences and mortality rates of acute lymphoblastic leukemia (ALL) in the world and a high frequency of early relapses (17%) and early mortality (15%). Otherwise, childhood overweight and obesity are reaching epidemic proportions. They have been associated with poor outcomes in children with ALL. The aim of present study was to identify if overweight and obesity are predictors of early mortality and relapse in Mexican children with ALL.
    Methods: A multicenter cohort study was conducted. ALL children younger than 15 years old were included and followed-up during the first 24 months after diagnosis. Overweight and obesity were classified according World Health Organization (WHO) and Centers for Disease Control and Prevention (CDC) criteria. Early mortality and early relapses were the main outcomes.
    Results: A total of 1070 children were analyzed. Overweight/obesity at diagnosis were predictors of early mortality (WHO: HR = 1.4, 95%CI:1.0-2.0; CDC: HR = 1.6, 95%CI:1.1-2.3). However, no associations between overweight (WHO: HR = 1.5, 95%CI:0.9-2.5; CDC: HR = 1.0; 95% CI:0.6-1.6) and obesity (WHO: HR = 1.5, 95%CI:0.7-3.2; CDC: HR = 1.4; 95%CI:0.9-2.3) with early relapse were observed.
    Conclusions: Overweight and obese patients embody a subgroup with high risk of dying during leukemia treatment.
    MeSH term(s) Adolescent ; Body Mass Index ; Child ; Child, Preschool ; Disease-Free Survival ; Female ; Follow-Up Studies ; Humans ; Incidence ; Infant ; Male ; Mexico/epidemiology ; Pediatric Obesity/epidemiology ; Pediatric Obesity/mortality ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/epidemiology ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/mortality ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/therapy ; Prognosis ; Recurrence
    Language English
    Publishing date 2019-07-18
    Publishing country England
    Document type Journal Article ; Multicenter Study
    ISSN 1471-2407
    ISSN (online) 1471-2407
    DOI 10.1186/s12885-019-5878-8
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Identification and Characterization of Novel Fusion Genes with Potential Clinical Applications in Mexican Children with Acute Lymphoblastic Leukemia.

    Mata-Rocha, Minerva / Rangel-López, Angelica / Jiménez-Hernández, Elva / Morales-Castillo, Blanca Angélica / González-Torres, Carolina / Gaytan-Cervantes, Javier / Álvarez-Olmos, Enrique / Núñez-Enríquez, Juan Carlos / Fajardo-Gutiérrez, Arturo / Martín-Trejo, Jorge Alfonso / Solís-Labastida, Karina Anastacia / Medina-Sansón, Aurora / Flores-Lujano, Janet / Sepúlveda-Robles, Omar Alejandro / Peñaloza-González, José Gabriel / Espinoza-Hernández, Laura Eugenia / Núñez-Villegas, Nora Nancy / Espinosa-Elizondo, Rosa Martha / Cortés-Herrera, Beatriz /
    Torres-Nava, José Refugio / Flores-Villegas, Luz Victoria / Merino-Pasaye, Laura Elizabeth / Bekker-Méndez, Vilma Carolina / Velázquez-Aviña, Martha Margarita / Pérez-Saldívar, María Luisa / Bautista-Martínez, Benito Alejandro / Amador-Sánchez, Raquel / González-Avila, Ana Itamar / Jiménez-Morales, Silvia / Duarte-Rodríguez, David Aldebarán / Santillán-Juárez, Jessica Denisse / García-Velázquez, Alejandra Jimena / Rosas-Vargas, Haydeé / Mejía-Aranguré, Juan Manuel

    International journal of molecular sciences

    2019  Volume 20, Issue 10

    Abstract: Acute lymphoblastic leukemia is the most common type of childhood cancer worldwide. Mexico City has one of the highest incidences and mortality rates of this cancer. It has previously been recognized that chromosomal translocations are important in ... ...

    Abstract Acute lymphoblastic leukemia is the most common type of childhood cancer worldwide. Mexico City has one of the highest incidences and mortality rates of this cancer. It has previously been recognized that chromosomal translocations are important in cancer etiology. Specific fusion genes have been considered as important treatment targets in childhood acute lymphoblastic leukemia (ALL). The present research aimed at the identification and characterization of novel fusion genes with potential clinical implications in Mexican children with acute lymphoblastic leukemia. The RNA-sequencing approach was used. Four fusion genes not previously reported were identified:
    MeSH term(s) Adolescent ; Adult ; CREB-Binding Protein/genetics ; Child ; Child, Preschool ; Dyneins/genetics ; Female ; GTPase-Activating Proteins/genetics ; Gene Expression Regulation, Neoplastic ; Gene Rearrangement ; Humans ; Ikaros Transcription Factor/genetics ; Infant ; Male ; Mexico ; Nuclear Proteins/genetics ; Oncogene Proteins, Fusion/genetics ; Precursor Cell Lymphoblastic Leukemia-Lymphoma/genetics ; Prognosis ; Proto-Oncogene Proteins c-ets/genetics ; RNA Cap-Binding Proteins/genetics ; RNA-Binding Proteins/genetics ; Receptors, Cytoplasmic and Nuclear/genetics ; Repressor Proteins/genetics ; Translocation, Genetic/genetics ; Young Adult ; ETS Translocation Variant 6 Protein
    Chemical Substances GTPase-Activating Proteins ; IKZF1 protein, human ; NUFIP1 protein, human ; Nuclear Proteins ; Oncogene Proteins, Fusion ; Proto-Oncogene Proteins c-ets ; RNA Cap-Binding Proteins ; RNA-Binding Proteins ; Receptors, Cytoplasmic and Nuclear ; Repressor Proteins ; SNUPN protein, human ; SRGAP3 protein, human ; Ikaros Transcription Factor (148971-36-2) ; CREB-Binding Protein (EC 2.3.1.48) ; CREBBP protein, human (EC 2.3.1.48) ; DNAH14 protein, human (EC 3.6.4.2) ; Dyneins (EC 3.6.4.2)
    Language English
    Publishing date 2019-05-15
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms20102394
    Database MEDical Literature Analysis and Retrieval System OnLINE

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