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  1. AU="Garcia, Chris"
  2. AU="Lee, Wai"
  3. AU=Meyerowitz Eric A
  4. AU="Álvarez-Pouso, Claudia"
  5. AU="Razak, Sufyan"
  6. AU=Kiryluk Krzysztof
  7. AU="Ayuso García, Blanca"
  8. AU="Papaioannou, Andriana I"
  9. AU=Zupancic Nina
  10. AU="Fish, Jonathan D."
  11. AU="Herr, Austin K"
  12. AU="Cochat Pierre"
  13. AU="Didelez, V"
  14. AU=Klimek Ludger
  15. AU="Van der Most, Peter J"
  16. AU="Talosig, A Rain"
  17. AU="Loveren, Henk Van"

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  1. Artikel ; Online: Antibody titer levels and the effect on subsequent SARS-CoV-2 infection in a large US-based cohort

    Sullivan, Adam / Alfego, David / Hu, Pingsha / Gillim, Laura / Grover, Ajay / Garcia, Chris / Cohen, Oren / Letovsky, Stan

    Heliyon. 2023 Feb., v. 9, no. 2 p.e13103-

    2023  

    Abstract: Despite a growing amount of data around the kinetics and durability of the antibody response induced by vaccination and previous infection, there is little understanding of whether or not a given quantitative level of antibodies correlates to protection ... ...

    Abstract Despite a growing amount of data around the kinetics and durability of the antibody response induced by vaccination and previous infection, there is little understanding of whether or not a given quantitative level of antibodies correlates to protection against SARS-CoV-2 infection or reinfection. In this study, we examine SARS-CoV-2 anti-spike receptor binding domain (RBD) antibody titers and subsequent SARS-CoV-2 reverse transcription polymerase chain reaction (RT-PCR) tests in a large cohort of US-based patients. We analyzed antibody test results in a cohort of 22,204 individuals, 6.8% (n = 1,509) of whom eventually tested positive for SARS-CoV-2 RNA, suggesting infection or reinfection. Kaplan-Meier curves were plotted to understand the effect of various levels of anti-spike RBD antibody titers (classified into discrete ranges) on subsequent RT-PCR positivity rates. Statistical analyses included fitting a Cox proportional hazards model to estimate the age-, sex- and exposure-adjusted hazard ratios for S antibody titer, using zip-code positivity rates by week as a proxy for COVID-19 exposure. It was found that the best models of the temporally associated infection risk were those based on log antibody titer level (HR = 0.836 (p < 0.05)). When titers were binned, the hazard ratio associated with antibody titer >250 Binding Antibody Units (BAU) was 0.27 (p < 0.05, 95% CI [0.18, 0.41]), while the hazard ratio associated with previous infection was 0.20 (p < 0.05, 95% CI [0.10, 0.39]). Fisher exact odds ratio (OR) for Ab titers <250 BAU showed OR = 2.84 (p < 0.05; 95% CI: [2.30, 3.53]) for predicting the outcome of a subsequent PCR test. Antibody titer levels correlate with protection against subsequent SARS-CoV-2 infection or reinfection when examining a cohort of real-world patients who had the spike RBD antibody assay performed.
    Schlagwörter COVID-19 infection ; RNA ; Severe acute respiratory syndrome coronavirus 2 ; antibodies ; antibody formation ; durability ; hazard ratio ; models ; odds ratio ; reverse transcriptase polymerase chain reaction ; risk ; vaccination ; COVID-19 ; SARS-CoV-2 ; Antibody ; Spike ; Nucleocapsid ; Seroprevalence ; AUC ; BAU ; HR ; IQR ; OR ; ROC ; RBD ; RT-PCR
    Sprache Englisch
    Erscheinungsverlauf 2023-02
    Erscheinungsort Elsevier Ltd
    Dokumenttyp Artikel ; Online
    Anmerkung Use and reproduction
    ZDB-ID 2835763-2
    ISSN 2405-8440
    ISSN 2405-8440
    DOI 10.1016/j.heliyon.2023.e13103
    Datenquelle NAL Katalog (AGRICOLA)

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  2. Artikel: Antibody titer levels and the effect on subsequent SARS-CoV-2 infection in a large US-based cohort.

    Sullivan, Adam / Alfego, David / Hu, Pingsha / Gillim, Laura / Grover, Ajay / Garcia, Chris / Cohen, Oren / Letovsky, Stan

    Heliyon

    2023  Band 9, Heft 2, Seite(n) e13103

    Abstract: Despite a growing amount of data around the kinetics and durability of the antibody response induced by vaccination and previous infection, there is little understanding of whether or not a given quantitative level of antibodies correlates to protection ... ...

    Abstract Despite a growing amount of data around the kinetics and durability of the antibody response induced by vaccination and previous infection, there is little understanding of whether or not a given quantitative level of antibodies correlates to protection against SARS-CoV-2 infection or reinfection. In this study, we examine SARS-CoV-2 anti-spike receptor binding domain (RBD) antibody titers and subsequent SARS-CoV-2 reverse transcription polymerase chain reaction (RT-PCR) tests in a large cohort of US-based patients. We analyzed antibody test results in a cohort of 22,204 individuals, 6.8% (n = 1,509) of whom eventually tested positive for SARS-CoV-2 RNA, suggesting infection or reinfection. Kaplan-Meier curves were plotted to understand the effect of various levels of anti-spike RBD antibody titers (classified into discrete ranges) on subsequent RT-PCR positivity rates. Statistical analyses included fitting a Cox proportional hazards model to estimate the age-, sex- and exposure-adjusted hazard ratios for S antibody titer, using zip-code positivity rates by week as a proxy for COVID-19 exposure. It was found that the best models of the temporally associated infection risk were those based on log antibody titer level (HR = 0.836 (p < 0.05)). When titers were binned, the hazard ratio associated with antibody titer >250 Binding Antibody Units (BAU) was 0.27 (p < 0.05, 95% CI [0.18, 0.41]), while the hazard ratio associated with previous infection was 0.20 (p < 0.05, 95% CI [0.10, 0.39]). Fisher exact odds ratio (OR) for Ab titers <250 BAU showed OR = 2.84 (p < 0.05; 95% CI: [2.30, 3.53]) for predicting the outcome of a subsequent PCR test. Antibody titer levels correlate with protection against subsequent SARS-CoV-2 infection or reinfection when examining a cohort of real-world patients who had the spike RBD antibody assay performed.
    Sprache Englisch
    Erscheinungsdatum 2023-01-21
    Erscheinungsland England
    Dokumenttyp Journal Article
    ZDB-ID 2835763-2
    ISSN 2405-8440
    ISSN 2405-8440
    DOI 10.1016/j.heliyon.2023.e13103
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  3. Artikel: Artificial intelligence and digital pathology: clinical promise and deployment considerations.

    Zarella, Mark D / McClintock, David S / Batra, Harsh / Gullapalli, Rama R / Valante, Michael / Tan, Vivian O / Dayal, Shubham / Oh, Kei Shing / Lara, Haydee / Garcia, Chris A / Abels, Esther

    Journal of medical imaging (Bellingham, Wash.)

    2023  Band 10, Heft 5, Seite(n) 51802

    Abstract: Artificial intelligence (AI) presents an opportunity in anatomic pathology to provide quantitative objective support to a traditionally subjective discipline, thereby enhancing clinical workflows and enriching diagnostic capabilities. AI requires access ... ...

    Abstract Artificial intelligence (AI) presents an opportunity in anatomic pathology to provide quantitative objective support to a traditionally subjective discipline, thereby enhancing clinical workflows and enriching diagnostic capabilities. AI requires access to digitized pathology materials, which, at present, are most commonly generated from the glass slide using whole-slide imaging. Models are developed collaboratively or sourced externally, and best practices suggest validation with internal datasets most closely resembling the data expected in practice. Although an array of AI models that provide operational support for pathology practices or improve diagnostic quality and capabilities has been described, most of them can be categorized into one or more discrete types. However, their function in the pathology workflow can vary, as a single algorithm may be appropriate for screening and triage, diagnostic assistance, virtual second opinion, or other uses depending on how it is implemented and validated. Despite the clinical promise of AI, the barriers to adoption have been numerous, to which inclusion of new stakeholders and expansion of reimbursement opportunities may be among the most impactful solutions.
    Sprache Englisch
    Erscheinungsdatum 2023-07-31
    Erscheinungsland United States
    Dokumenttyp Journal Article ; Review
    ISSN 2329-4302
    ISSN 2329-4302
    DOI 10.1117/1.JMI.10.5.051802
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  4. Artikel ; Online: Simulation in Surgical Resident Education: A Porcine Hemostasis and Laparoscopic Model.

    Cambronero, Gabriel E / Sanin, Gloria D / Patterson, James W / Galli, Lucas D / Garcia, Chris / Bosley, Maggie E / Powell, Myron S / Ashburn, Jean H / Jordan, James E

    The American surgeon

    2023  Band 89, Heft 7, Seite(n) 3145–3147

    Abstract: The steep learning curve associated with learning laparoscopic techniques and limited training opportunities represents a challenge to general surgery resident training. The objective of this study was to use a live porcine model to improve surgical ... ...

    Abstract The steep learning curve associated with learning laparoscopic techniques and limited training opportunities represents a challenge to general surgery resident training. The objective of this study was to use a live porcine model to improve surgical training in laparoscopic technique and management of bleeding. Nineteen general surgery residents (ranging from PGY 3 to 5) completed the porcine simulation and completed pre-lab and post-lab questionnaires. The institution's industry partner served as sponsors and educators on hemostatic agents and energy devices. Residents had a significant increase in confidence with laparoscopic techniques and the management of hemostasis (
    Mesh-Begriff(e) Swine ; Animals ; Internship and Residency ; Clinical Competence ; Laparoscopy/education ; Curriculum ; Hemostasis ; General Surgery/education
    Sprache Englisch
    Erscheinungsdatum 2023-03-02
    Erscheinungsland United States
    Dokumenttyp Journal Article
    ZDB-ID 202465-2
    ISSN 1555-9823 ; 0003-1348
    ISSN (online) 1555-9823
    ISSN 0003-1348
    DOI 10.1177/00031348231161678
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  5. Artikel ; Online: The Future of Agriculture in a Water-Rich State

    Ann Lewandowski, Axel Garcia y Garcia, Chris Lenhart, David Mulla, Amit Pradhananga, and Jeff Strock

    Open Rivers, Iss Issue Ten : Spring

    2018  Band 2018

    Abstract: In 1920, Minnesota held 2.4 million people and 132,744 farms. Corn production was near 100 million bushels per year. By 1929, 18.5 million acres were under cultivation. Nearly 100 years later, the state has 5.4 million people, 74,500 farms, and 26 ... ...

    Abstract In 1920, Minnesota held 2.4 million people and 132,744 farms. Corn production was near 100 million bushels per year. By 1929, 18.5 million acres were under cultivation. Nearly 100 years later, the state has 5.4 million people, 74,500 farms, and 26 million acres of farmland. Annual production of corn is about 1.5 billion bushels and soybean is about 380 million bushels. Over that century, agricultural technology and infrastructure changed profoundly.
    Schlagwörter biological sciences ; minnesota ; planning / policy ; research ; science ; Geography. Anthropology. Recreation ; G ; History of scholarship and learning. The humanities ; AZ20-999
    Sprache Englisch
    Erscheinungsdatum 2018-04-01T00:00:00Z
    Verlag University of Minnesota Libraries Publishing
    Dokumenttyp Artikel ; Online
    Datenquelle BASE - Bielefeld Academic Search Engine (Lebenswissenschaftliche Auswahl)

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  6. Artikel: Whole Slide Imaging for Teleconsultation: The Mount Sinai Hospital, Labcorp Dianon, and Philips Collaborative Experience.

    Haghighi, Mehrvash / Tolley, Jay / Schito, Agostino N / Kwan, Ricky / Garcia, Chris / Prince, Shakira / Harpaz, Noam / Thung, Swan N / Craven, Catherine K / Cordon-Cardo, Carlos / Westra, William H

    Journal of pathology informatics

    2021  Band 12, Seite(n) 53

    Abstract: Background: With the emergence of whole slide imaging (WSI) and widespread access to high-speed Internet, pathology labs are now poised to implement digital pathology as a way to access diagnostic pathology expertise. This paper describes a ... ...

    Abstract Background: With the emergence of whole slide imaging (WSI) and widespread access to high-speed Internet, pathology labs are now poised to implement digital pathology as a way to access diagnostic pathology expertise. This paper describes a collaborative partnership between a high-volume reference diagnostic laboratory (Labcorp) and an academic pathology department (Mount Sinai Hospital) in the transition from a traditional glass slide service to a digital platform. Using the standard framework of implementation science, we evaluate the consistency and quality of the Philips IntelliSite Pathology Solution (PIPS) in delivering save and efficient diagnostic services.
    Materials and methods: Digital and glass slide diagnoses of all consult cases were documented over a 12-month period. The Proctor guideline was used to quantitatively and qualitatively measure (e.g., focus group studies, field notes, and administrative data) implementation success. Lean techniques (e.g., value stream mapping) were applied to measure changes in efficiency with the transition to a digital platform.
    Results: Our study supports the acceptability, high adoption, appropriateness, feasibility, fidelity, and sustainability of the digital pathology platform. The digital portal also improved the quality of patient care by increasing efficiency, effectiveness, safety, and timeliness. The intraobserver concordance rate was 100%. The digital transition resulted in a reduction in turnaround time from 86 h to an average 35 min and a 20-fold increase in efficiency of the consultation process.
    Conclusion: As the pathology community contemplates digital pathology as a transformational tool in providing broad access to diagnostic expertise across time and space, our study provides an implementation strategy along with evidence that the digital platform is safe, effective, and efficient.
    Sprache Englisch
    Erscheinungsdatum 2021-12-24
    Erscheinungsland United States
    Dokumenttyp Journal Article
    ZDB-ID 2579241-6
    ISSN 2153-3539 ; 2229-5089
    ISSN (online) 2153-3539
    ISSN 2229-5089
    DOI 10.4103/jpi.jpi_74_21
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  7. Artikel ; Online: Leveraging an established neighbourhood-level, open access wastewater monitoring network to address public health priorities: a population-based study.

    Bowes, Devin A / Driver, Erin M / Kraberger, Simona / Fontenele, Rafaela S / Holland, LaRinda A / Wright, Jillian / Johnston, Bridger / Savic, Sonja / Engstrom Newell, Melanie / Adhikari, Sangeet / Kumar, Rahul / Goetz, Hanah / Binsfeld, Allison / Nessi, Kaxandra / Watkins, Payton / Mahant, Akhil / Zevitz, Jacob / Deitrick, Stephanie / Brown, Philip /
    Dalton, Richard / Garcia, Chris / Inchausti, Rosa / Holmes, Wydale / Tian, Xiao-Jun / Varsani, Arvind / Lim, Efrem S / Scotch, Matthew / Halden, Rolf U

    The Lancet. Microbe

    2022  Band 4, Heft 1, Seite(n) e29–e37

    Abstract: Background: Before the COVID-19 pandemic, the US opioid epidemic triggered a collaborative municipal and academic effort in Tempe, Arizona, which resulted in the world's first open access dashboard featuring neighbourhood-level trends informed by ... ...

    Abstract Background: Before the COVID-19 pandemic, the US opioid epidemic triggered a collaborative municipal and academic effort in Tempe, Arizona, which resulted in the world's first open access dashboard featuring neighbourhood-level trends informed by wastewater-based epidemiology (WBE). This study aimed to showcase how wastewater monitoring, once established and accepted by a community, could readily be adapted to respond to newly emerging public health priorities.
    Methods: In this population-based study in Greater Tempe, Arizona, an existing opioid monitoring WBE network was modified to track SARS-CoV-2 transmission through the analysis of 11 contiguous wastewater catchments. Flow-weighted and time-weighted 24 h composite samples of untreated wastewater were collected at each sampling location within the wastewater collection system for 3 days each week (Tuesday, Thursday, and Saturday) from April 1, 2020, to March 31, 2021 (Area 7 and Tempe St Luke's Hospital were added in July, 2020). Reverse transcription quantitative PCR targeting the E gene of SARS-CoV-2 isolated from the wastewater samples was used to determine the number of genome copies in each catchment. Newly detected clinical cases of COVID-19 by zip code within the City of Tempe, Arizona were reported daily by the Arizona Department of Health Services from May 23, 2020. Maricopa County-level new positive cases, COVID-19-related hospitalisations, deaths, and long-term care facility deaths per day are publicly available and were collected from the Maricopa County Epidemic Curve Dashboard. Viral loads of SARS-CoV-2 (genome copies per day) measured in wastewater from each catchment were aggregated at the zip code level and city level and compared with the clinically reported data using root mean square error to investigate early warning capability of WBE.
    Findings: Between April 1, 2020, and March 31, 2021, 1556 wastewater samples were analysed. Most locations showed two waves in viral levels peaking in June, 2020, and December, 2020-January, 2021. An additional wave of viral load was seen in catchments close to Arizona State University (Areas 6 and 7) at the beginning of the fall (autumn) semester in late August, 2020. Additionally, an early infection hotspot was detected in the Town of Guadalupe, Arizona, starting the week of May 4, 2020, that was successfully mitigated through targeted interventions. A shift in early warning potential of WBE was seen, from a leading (mean of 8·5 days [SD 2·1], June, 2020) to a lagging (-2·0 days [1·4], January, 2021) indicator compared with newly reported clinical cases.
    Interpretation: Lessons learned from leveraging an existing neighbourhood-level WBE reporting dashboard include: (1) community buy-in is key, (2) public data sharing is effective, and (3) sub-ZIP-code (postal code) data can help to pinpoint populations at risk, track intervention success in real time, and reveal the effect of local clinical testing capacity on WBE's early warning capability. This successful demonstration of transitioning WBE efforts from opioids to COVID-19 encourages an expansion of WBE to tackle newly emerging and re-emerging threats (eg, mpox and polio).
    Funding: National Institutes of Health's RADx-rad initiative, National Science Foundation, Virginia G Piper Charitable Trust, J M Kaplan Fund, and The Flinn Foundation.
    Mesh-Begriff(e) Humans ; Access to Information ; Analgesics, Opioid ; COVID-19/epidemiology ; Health Priorities ; Pandemics ; Research Design ; SARS-CoV-2 ; United States ; Wastewater
    Chemische Substanzen Analgesics, Opioid ; Wastewater
    Sprache Englisch
    Erscheinungsdatum 2022-12-06
    Erscheinungsland England
    Dokumenttyp Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't, Non-P.H.S.
    ISSN 2666-5247
    ISSN (online) 2666-5247
    DOI 10.1016/S2666-5247(22)00289-0
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  8. Artikel ; Online: Laser angiography as a predictor of mastectomy flap necrosis after breast reconstruction.

    Murray, John D / Jones, Glyn E / Elwood, Eric T / Whitty, Lisa A / Garcia, Chris

    Plastic and reconstructive surgery

    2012  Band 129, Heft 6, Seite(n) 1017e–1018e

    Mesh-Begriff(e) Angiography/methods ; Female ; Humans ; Lasers ; Mammaplasty/adverse effects ; Mastectomy ; Necrosis/diagnosis ; Postoperative Complications/diagnosis ; Reproducibility of Results ; Surgical Flaps/blood supply ; Surgical Flaps/pathology
    Sprache Englisch
    Erscheinungsdatum 2012-04-05
    Erscheinungsland United States
    Dokumenttyp Journal Article
    ZDB-ID 208012-6
    ISSN 1529-4242 ; 0032-1052 ; 0096-8501
    ISSN (online) 1529-4242
    ISSN 0032-1052 ; 0096-8501
    DOI 10.1097/PRS.0b013e31824eff93
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  9. Buch: Transboundary waters

    O'Leary, Marilyn / Garcia, Chris

    crossing cultural boundaries for sustainable solutions ; a multicultural approach

    2005  

    Körperschaft Utton Transboundary Resources Center
    Verfasserangabe written by Marilyn C. O'Leary and Chris Garcia
    Schlagwörter Indians of North America ; Interstate agreements ; Water resources development/Law and legislation ; Water rights
    Sprache Englisch
    Umfang ii, 66 p, ill., maps, ports, 32 cm
    Verlag Utton Transboundary Resources Center
    Erscheinungsort Albuquerque, NM
    Dokumenttyp Buch
    Anmerkung "Conference Report & Synthesis" - on cover ; "This report is a synthesis of the presentations and discussions of the Utton Transboundary Resources Center's conference held September 2004 at the Sana Ana Pueblo in New Mexico."--p. i ; Cover title
    Datenquelle Ehemaliges Sondersammelgebiet Küsten- und Hochseefischerei

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  10. Artikel ; Online: Fluorescent intraoperative tissue angiography with indocyanine green: evaluation of nipple-areola vascularity during breast reduction surgery.

    Murray, John D / Jones, Glyn E / Elwood, Eric T / Whitty, Lisa A / Garcia, Chris

    Plastic and reconstructive surgery

    2010  Band 126, Heft 1, Seite(n) 33e–34e

    Mesh-Begriff(e) Coloring Agents/administration & dosage ; Female ; Fluorescein Angiography/methods ; Humans ; Indocyanine Green/administration & dosage ; Injections ; Mammaplasty/methods ; Monitoring, Intraoperative/methods ; Nipples/blood supply ; Reproducibility of Results
    Chemische Substanzen Coloring Agents ; Indocyanine Green (IX6J1063HV)
    Sprache Englisch
    Erscheinungsdatum 2010-04-23
    Erscheinungsland United States
    Dokumenttyp Letter
    ZDB-ID 208012-6
    ISSN 1529-4242 ; 0032-1052 ; 0096-8501
    ISSN (online) 1529-4242
    ISSN 0032-1052 ; 0096-8501
    DOI 10.1097/PRS.0b013e3181dab2c2
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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