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  1. Article ; Online: Microbiological Indication of Soils in Forest Plantations of the Shirinskaya Steppe

    Grodnitskaya, I. D. / Senashova, V. A. / Antonov, G. I. / Pashkeeva, O. E.

    Contemp. Probl. Ecol.. 2022 Dec., v. 15, no. 7 p.765-776

    2022  

    Abstract: To control soil degradation and desertification, sustainable long-term protective forest plantations that perform water and soil protection functions are commonly used on the erosion-prone lands of steppe ecosystems. In the Shirinskaya dry lake-basin ... ...

    Abstract To control soil degradation and desertification, sustainable long-term protective forest plantations that perform water and soil protection functions are commonly used on the erosion-prone lands of steppe ecosystems. In the Shirinskaya dry lake-basin steppe (Khakassia) in the coastal zone of Lake Shira, the staff of the Sukachev Institute of Forest, Siberian Branch, Russian Academy of Sciences, has created artificial plantings of forest cultures (Pinus sylvestris L., Larix sibirica L., and Ulmus humilis L.) and provenance trials (P. sibirica Du Tour and P. sylvestris). A wildfire damaged the coastal 40-year-old forest cultures in 2015; the surface soil layer was burnt out. Agrotechnical soil cultivation for planting provenance trials (2017) and wildfire in forest cultures affected the state of soil microbiomes. The aim of the research is to assess the rate of recovery and formation of biological soil properties in forest plantations after disturbances (wildfire and agrotechnical influences) in the coastal dry-steppe zone of Lake Shira using microbiological indicators. The research objects are the Burnt Areas (postfire and postconflagration areas) and Provenance Trial Plantation sites. The use of microbial indicators shows that the soil microbiomes on the burnt sites are restored with different intensities. The recovery of soil microbiomes on the postfire sites is much faster than in the postconflagration sites, as is evidenced by the high values of the total number of microorganisms (TNM), microbial biomass (MB), enzymatic activity (EA), and humification coefficient (Cₕ), which are close to the control values. Specific microbial respiration (qCO₂) is within the range of natural variability. The burnt soil is characterized by an increased proportion of hydrolytic microorganisms actively participating in the decomposition of half-burnt plant residues. On the provenance trial sites under the pine seedlings, specific rhizosphere microbiomes are forming due to the influence of the root exudates of climatypes. The values of TNM, ETGM, MB, EA, and qCO₂ change either upwards or downwards; the state of microbial communities has not reached its ecophysiological norm.
    Keywords Larix sibirica ; Pinus sylvestris ; Ulmus ; burnt soils ; coasts ; desertification ; ecophysiology ; enzyme activity ; forests ; humification ; lakes ; microbial biomass ; microbiome ; provenance ; rhizosphere ; soil degradation ; soil microorganisms ; steppes ; tillage ; wildfires
    Language English
    Dates of publication 2022-12
    Size p. 765-776.
    Publishing place Pleiades Publishing
    Document type Article ; Online
    ZDB-ID 2424032-1
    ISSN 1995-4263 ; 1995-4255
    ISSN (online) 1995-4263
    ISSN 1995-4255
    DOI 10.1134/S1995425522070095
    Database NAL-Catalogue (AGRICOLA)

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  2. Article: Features of the Formation of Microbiomes in Two Types of Soils under Pine Provenance Trials of Pinus sibirica Du Tour and Pinus koraiensis Siebold et Zucc

    Grodnitskaya, I. D. / Kuznetsova, G. V. / Pashkeeva, O. E. / Antonov, G. I.

    Biology bulletin of the Russian Academy of Sciences. 2021 July, v. 48, no. 4

    2021  

    Abstract: The effect of pine provenance trials of Pinus sibirica Du Tour and Pinus koraiensis Siebold et Zucc. grown in Krasnoyarsk and Khabarovsk krais on the chemical and biological parameters of gray forest and brown forest soils in the rhizosphere and between ... ...

    Abstract The effect of pine provenance trials of Pinus sibirica Du Tour and Pinus koraiensis Siebold et Zucc. grown in Krasnoyarsk and Khabarovsk krais on the chemical and biological parameters of gray forest and brown forest soils in the rhizosphere and between rows of plantations is compared. It is shown that the interspecies heterogeneity of pines affects the chemical composition of the soil, the enzymatic and microbiological activity, and the formation of prokaryotic microbiomes. It is noted that the biodiversity of prokaryotes is more strongly determined by the features of soil types than by the inter- and intraspecies heterogeneity of pines and by the effect of their roots. The phyla Proteobacteria, Acidobacteria, and Actinobacteria dominate in both soil types and together account for 75–85% of the total number of type-specific 16S rRNA gene sequences in each soil.
    Keywords Acidobacteria ; Actinobacteria ; Pinus koraiensis ; Pinus sibirica ; Proteobacteria ; biodiversity ; chemical composition ; forests ; genes ; microbiome ; prokaryotic cells ; provenance ; rhizosphere
    Language English
    Dates of publication 2021-07
    Size p. 425-439.
    Publishing place Pleiades Publishing
    Document type Article
    ZDB-ID 1161709-3
    ISSN 1062-3590
    ISSN 1062-3590
    DOI 10.1134/S1062359021030067
    Database NAL-Catalogue (AGRICOLA)

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  3. Article: Impact of Forest Fires on the Microbiological Properties of Oligotrophic Peat Soils and Gleyed Peat Podzols of Bogs in the Northern Part of the Sym-Dubches Interfluve, Krasnoyarsk Region

    Grodnitskaya, I. D. / Karpenko, L. V. / Pashkeeva, O. E. / Goncharova, N. N. / Startsev, V. V. / Baturina, O. A. / Dymov, A. A.

    Eurasian soil science. 2022 Apr., v. 55, no. 4

    2022  

    Abstract: Key plots of hydromorphic and semihydromorphic peat soils of oligotrophic bogs were studied in the area of the Middle Yenisei Station of the Institute of Forest, Siberian Branch of the Russian Academy of Sciences. Hydromorphic soils were classified as ... ...

    Abstract Key plots of hydromorphic and semihydromorphic peat soils of oligotrophic bogs were studied in the area of the Middle Yenisei Station of the Institute of Forest, Siberian Branch of the Russian Academy of Sciences. Hydromorphic soils were classified as Fibric Histosols (FHS1 and FHS2), and semihydromorphic soils were classified as Histic Albic Podzols (PZ1 and PZ2). It was found that fires had a significant impact on the initial waterlogging of the studied territory. The pyrogenic horizons of peat soils were generally enriched in ash elements and differed from one another in the contents of carbon and nitrogen. The functional activity of microbial communities in the studied soils was low, and this affected the content of microbial biomass and respiration rate. The restoration of microbial activity in pyrogenic horizons proceeded slowly because of the deficit of available organic matter. The qualitative and quantitative compositions of bacterial biomes and mycobiomes of peat soils differed in the studied plot and soil horizons. The number and species diversity of prokaryotes in all areas was quite high. Representatives of Proteobacteria and Archaea played the leading role in the development of pyrogenic horizons; the number of their operational taxonomic units (OTUs) in these horizons was significantly higher than that in the nonpyrogenic horizons, where Acidobacteria predominated. The mycobiomes of the FHS1 and FHS2 plots were significantly less abundant and had lower species diversity as compared to the PZ1 and PZ2 plots. The number of fungi was higher in the nonpyrogenic horizons; the number and diversity of fungi decreased in the pyrogenic horizons. The mycobiomes of the upper pyrogenic horizons included groups of carbotrophic fungi that can develop on charcoal.
    Keywords Acidobacteria ; Archaea ; Histosols ; Podzols ; Proteobacteria ; carbon ; cell respiration ; charcoal ; forests ; microbial activity ; microbial biomass ; nitrogen ; organic matter ; peat ; prokaryotic cells ; species diversity
    Language English
    Dates of publication 2022-04
    Size p. 460-473.
    Publishing place Pleiades Publishing
    Document type Article
    ZDB-ID 1131509-x
    ISSN 1556-195X ; 1064-2293
    ISSN (online) 1556-195X
    ISSN 1064-2293
    DOI 10.1134/S1064229322040093
    Database NAL-Catalogue (AGRICOLA)

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  4. Article: Structure of microbial communities of peat soils in two bogs in Siberian tundra and forest zones

    Grodnitskaya, I.D / M. Yu. Trusova / S. N. Syrtsov / N. V. Koroban

    Microbiology. 2018 Jan., v. 87, no. 1

    2018  

    Abstract: The structure and functional activity of microbial complexes of a forest oligo-mesotrophic subshrub- grass-moss bog (OMB, Central Evenkiya) and a subshrub-sedge bog in the polygonal tundra (PB, Lena River Delta Samoylovsky Island) was studied. Soil of ... ...

    Abstract The structure and functional activity of microbial complexes of a forest oligo-mesotrophic subshrub- grass-moss bog (OMB, Central Evenkiya) and a subshrub-sedge bog in the polygonal tundra (PB, Lena River Delta Samoylovsky Island) was studied. Soil of the forest bog (OMB) differed from that of the polygonal tundra bog (PB) in higher productivity (Cₒᵣg, Nₜₒₜₐₗ, P, and K reserves), higher biomass of aerobic chemoorganotrophs (2.0 to 2.6 times), and twice the level of available organic matter. The contribution of microorganisms to the carbon pool was different, with the share of Cₘᵢc in Cₒᵣg 1.4 to 2.5 times higher in PB compared to OMB. Qualitative composition of the methane cycle microorganisms in PB and OMB soils differed significantly. Methanogenic archaea (Euryarchaeota) in the shrub-sedge PB of tundra were more numerous and diverse than in the oligo-mesotrophic bog (OMB) and belonged to six families (Methanomassiliicoccaceae, Methanoregulaceae, Methanobacteriaceae, Methanomicrobiaceaee, Methanosarcinaceae, and Methanotrichaceae), while members of only four families (Methanosarcinacea, Methanobacteriaceae, Methanotrichaceae, and Methanomassiliicoccaceae) were revealed in OMB. In both bogs, methane-oxidizing bacteria belonged to Alphaproteobacteria (II) and Gammaproteobacteria (I). Methanotroph diversity was higher in OMB than in PB. Microbial communities of PB soils had higher potential activity of methanogenesis and methanotrophy compared to those of OMB. Methanogenic and methanotrophic activities in PB were 20 and 2.3 times higher, respectively, than in OMB.
    Keywords Methanobacteriaceae ; Methanosarcinaceae ; alpha-Proteobacteria ; biomass ; bogs ; carbon sinks ; forests ; gamma-Proteobacteria ; methane ; methane production ; methanogens ; methanotrophs ; microbial communities ; organic matter ; peat soils ; river deltas ; tundra
    Language English
    Dates of publication 2018-01
    Size p. 89-102.
    Publishing place Pleiades Publishing
    Document type Article
    ZDB-ID 209706-0
    ISSN 1608-3237 ; 0026-2617
    ISSN (online) 1608-3237
    ISSN 0026-2617
    DOI 10.1134/S0026261718010083
    Database NAL-Catalogue (AGRICOLA)

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  5. Article: Microbiological Parameters and Peat Stratigraphy of Two Types of Bogs in the Northern Part of the Sym–Dubches Interfluve (Krasnoyarsk Krai)

    Grodnitskaya, I.D / L. V. Karpenko / S. N. Syrtsov / A. S. Prokushkin

    Biology bulletin of the Russian Academy of Sciences. 2018 Mar., v. 45, no. 2

    2018  

    Abstract: The phytocenotic and microbiological features of two types of bogs (oligotrophic and eutrophic) in the northern part of the Sym–Dubches interfluve (the middle taiga subzone in the Yenisei region of Siberia) have been studied. The descriptions of the ... ...

    Abstract The phytocenotic and microbiological features of two types of bogs (oligotrophic and eutrophic) in the northern part of the Sym–Dubches interfluve (the middle taiga subzone in the Yenisei region of Siberia) have been studied. The descriptions of the plant cover of bogs and peat stratigraphy and age are given. It has been revealed that peat of the bogs studied is characterized by a low or medium ash content; a small amount of N, P, and K; and an acid and slightly acid reaction, which results in their moderate microbial and fermentation activity and favors accumulation and conservation of plant remains and microbial biomass. It has been proved that the microbocenoses of the eutrophic and oligotrophic bogs are characterized by a stable ecophysiological status of the natural norm.
    Keywords ash content ; bogs ; ecophysiology ; eutrophication ; fermentation ; microbial biomass ; microbiological quality ; nitrogen ; peat ; phosphorus ; potassium ; stratigraphy ; taiga ; Siberia
    Language English
    Dates of publication 2018-03
    Size p. 160-170.
    Publishing place Pleiades Publishing
    Document type Article
    ZDB-ID 1161709-3
    ISSN 1062-3590
    ISSN 1062-3590
    DOI 10.1134/S1062359018020036
    Database NAL-Catalogue (AGRICOLA)

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  6. Article ; Online: Holocene and recent fires influence on soil organic matter, microbiological and physico-chemical properties of peats in the European North-East of Russia

    Dymov, A.A. / Gorbach, N.M. / Goncharova, N.N. / Karpenko, L.V. / Gabov, D.N. / Kutyavin, I.N. / Startsev, V.V. / Mazur, A.S. / Grodnitskaya, I.D.

    Catena. 2022 Oct., v. 217 p.106449-

    2022  

    Abstract: The influence of fires on the development and chemical composition of two Rheic Hemic Histosols in the native territory of the middle taiga of the Komi Republic was estimated. The development of peat on site I (SI) located in the south boarder of the ... ...

    Abstract The influence of fires on the development and chemical composition of two Rheic Hemic Histosols in the native territory of the middle taiga of the Komi Republic was estimated. The development of peat on site I (SI) located in the south boarder of the middle taiga began in the Boreal period (about nine ths. years ago¹⁴C yr BP). The growth of peat on site II (SII) located at the foothills of the Northern Urals started in the middle of the Atlantic Holocene period (about 6.7 ths. years ago¹⁴C yr BP). This work shows that during the time of development, peatlands experienced various pyrogenic events. The organic horizons were burned out and often led to a change in the dominant ground cover plants. Also, the charcoal particles formed during the fire at the forest surrounding the bogs were transported by air and accumulated in the peat. The pyrogenic history of the studied peats is different, the SI was subjected to intense fires at least twice: at the beginning of formation and in the modern period (140 years ago). The Histosol on SII experienced only low-intensity and indirect fire effect. The highest burning activity of nearest forests in both sites estimated based on charcoal content occurred at the end of the Atlantic, middle of the Subboreal periods. It was shown that an increase in the aromatic compounds occurs in horizons with pyrogenic features; in some cases, an increase in the concentration of polycyclic aromatic hydrocarbons (PAHs) was revealed. The aromatic compounds content in the SOM is determined by the content of macroscopic charcoal particles with significant correlation (CAᵣ₋H₍C₎, R = 0.49, p < 0.05, CAᵣ₋O,N, R = 0.68, p < 0.05). It is shown that a high frequency of fires leads to an increase in carbon stocks at Histosols.
    Keywords Histosols ; Holocene epoch ; Russia ; air ; carbon ; catenas ; charcoal ; forests ; peat ; peatlands ; soil organic matter ; taiga ; PyC ; 13C NMR ; Black carbon ; Boreal forest
    Language English
    Dates of publication 2022-10
    Publishing place Elsevier B.V.
    Document type Article ; Online
    ZDB-ID 519608-5
    ISSN 1872-6887 ; 0008-7769 ; 0341-8162
    ISSN (online) 1872-6887 ; 0008-7769
    ISSN 0341-8162
    DOI 10.1016/j.catena.2022.106449
    Database NAL-Catalogue (AGRICOLA)

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  7. Article: Microbiological Transformation of Carbon and Nitrogen Compounds in Forest Soils of Central Evenkia

    Sorokin, N. D. / Aleksandrov, D. E. / Grodnitskaya, I. D. / Evgrafova, S. Yu.

    Eurasian soil science

    2017  Volume 50, Issue 4, Page(s) 476

    Language English
    Document type Article
    ZDB-ID 1131509-x
    ISSN 1064-2293
    Database Current Contents Nutrition, Environment, Agriculture

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  8. Article: Dynamics of the Ecological-Functional Parameters of Replantozems on Dumps of Open-pit Coal Mines in Central Siberia

    Trefilova, O. V. / Grodnitskaya, I. D. / Efimov, D. Yu.

    Eurasian soil science

    2013  Volume 46, Issue 12, Page(s) 1253

    Language English
    Document type Article
    ZDB-ID 1131509-x
    ISSN 1064-2293
    Database Current Contents Nutrition, Environment, Agriculture

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  9. Article: Dynamics of the ecological-functional parameters of replantozems on dumps of open-pit coal mines in Central Siberia

    Trefilova, O. V / Grodnitskaya, I. D / Efimov, D. Yu

    Eurasian soil science. 2013 Dec., v. 46, no. 12

    2013  

    Abstract: The dynamics have been studied of the ecological-functional parameters (EFP) of replantozems formed on the dumps of the Borodinskiy open-pit coal mine in the Kansk-Achinsk Coal Basin (55°52′ N, 94°54′ E) that were not involved into agricultural use ... ...

    Abstract The dynamics have been studied of the ecological-functional parameters (EFP) of replantozems formed on the dumps of the Borodinskiy open-pit coal mine in the Kansk-Achinsk Coal Basin (55°52′ N, 94°54′ E) that were not involved into agricultural use during the first 30 years. The work was based on the integrated analysis of the agrochemical properties and the EFP, which characterized the state of the plant cover, the microbial cenoses, and the biochemical activity of the replantozems representing a chronological series (5, 20, and 30 years). Multicomponent plant communities were formed on the surface of the replantozems over the 30-year period. The filled horizon of the replantozems was slowly involved into the metabolic processes. The thickness of the biologically active layer did not exceed 10 cm. The microbial cenosis’s functional activity was relatively stabilized, and the values of the microbial biomass and basal respiration approached the background ones only in the upper (0–5 cm) layer. The biochemical activity of the microorganisms agreed with the changes in the properties of the upper (0–10 cm) layer of the replantozems: the contents of the total nitrogen and humus increased, as well as the degree of the humic acids “maturity” and the concentration of the mobile phosphorus, while the alkalinity decreased.
    Keywords alkalinity ; coal ; humic acids ; humus ; microbial biomass ; nitrogen content ; phosphorus ; plant communities ; Siberia
    Language English
    Dates of publication 2013-12
    Size p. 1253-1262.
    Publishing place Springer-Verlag
    Document type Article
    ZDB-ID 1131509-x
    ISSN 1556-195X ; 1064-2293
    ISSN (online) 1556-195X
    ISSN 1064-2293
    DOI 10.1134/S106422931401013X
    Database NAL-Catalogue (AGRICOLA)

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  10. Article: Microbial activity of peat soils of boggy larch forests and bogs in the permafrost zone of central Evenkia

    Grodnitskaya, I. D / Karpenko, L. V / Knorre, A. A / Syrtsov, S. N

    Eurasian soil science. 2013 Jan., v. 46, no. 1

    2013  

    Abstract: The microbial activity of peat soils was studied in boggy larch forests and in an oligo-mesotrophic bog in the basins of the Kochechum and Nizhnaya Tunguska rivers (central Evenkia). It was found that the organic matter transformation in the peat soils ... ...

    Abstract The microbial activity of peat soils was studied in boggy larch forests and in an oligo-mesotrophic bog in the basins of the Kochechum and Nizhnaya Tunguska rivers (central Evenkia). It was found that the organic matter transformation in the peat soils of all the plots is mainly performed by oligotrophic bacteria composing 88–98% of the total bacterial complex. The major contribution to the organic matter destruction belonged to the heterotrophic microorganisms, the activity of which depended on the permafrost depth and the soil temperature, the soil acidity, and the botanical composition of the peat. Peat soils were characterized by different activities as judged from their microbiological and biochemical parameters. The functioning of microbial communities in the studied ecotopes of the permafrost zone was within the range of natural variations, which pointed to their ecological stability.
    Keywords bacteria ; basins ; bogs ; botanical composition ; forests ; heterotrophs ; microbial activity ; microbial communities ; organic matter ; peat ; peat soils ; permafrost ; rivers ; soil depth ; soil pH ; soil temperature
    Language English
    Dates of publication 2013-01
    Size p. 61-73.
    Publishing place Springer-Verlag
    Document type Article
    ZDB-ID 1131509-x
    ISSN 1556-195X ; 1064-2293
    ISSN (online) 1556-195X
    ISSN 1064-2293
    DOI 10.1134/S1064229313010043
    Database NAL-Catalogue (AGRICOLA)

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