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  1. Article ; Online: Setting up Agrobacterium tumefaciens-mediated transformation of the tropical legume Aeschynomene evenia, a powerful tool for studying gene function in Nod Factor-independent symbiosis.

    Tisseyre, Pierre / Cartieaux, Fabienne / Chabrillange, Nathalie / Gully, Djamel / Hocher, Valérie / Svistoonoff, Sergio / Gherbi, Hassen

    PloS one

    2024  Volume 19, Issue 4, Page(s) e0297547

    Abstract: Most legumes are able to develop a root nodule symbiosis in association with proteobacteria collectively called rhizobia. Among them, the tropical species Aeschynomene evenia has the remarkable property of being nodulated by photosynthetic Rhizobia ... ...

    Abstract Most legumes are able to develop a root nodule symbiosis in association with proteobacteria collectively called rhizobia. Among them, the tropical species Aeschynomene evenia has the remarkable property of being nodulated by photosynthetic Rhizobia without the intervention of Nod Factors (NodF). Thereby, A. evenia has emerged as a working model for investigating the NodF-independent symbiosis. Despite the availability of numerous resources and tools to study the molecular basis of this atypical symbiosis, the lack of a transformation system based on Agrobacterium tumefaciens significantly limits the range of functional approaches. In this report, we present the development of a stable genetic transformation procedure for A. evenia. We first assessed its regeneration capability and found that a combination of two growth regulators, NAA (= Naphthalene Acetic Acid) and BAP (= 6-BenzylAminoPurine) allows the induction of budding calli from epicotyls, hypocotyls and cotyledons with a high efficiency in media containing 0,5 μM NAA (up to 100% of calli with continuous stem proliferation). To optimize the generation of transgenic lines, we employed A. tumefaciens strain EHA105 harboring a binary vector carrying the hygromycin resistance gene and the mCherry fluorescent marker. Epicotyls and hypocotyls were used as the starting material for this process. We have found that one growth medium containing a combination of NAA (0,5 μM) and BAP (2,2 μM) was sufficient to induce callogenesis and A. tumefaciens strain EHA105 was sufficiently virulent to yield a high number of transformed calli. This simple and efficient method constitutes a valuable tool that will greatly facilitate the functional studies in NodF-independent symbiosis.
    MeSH term(s) Fabaceae/genetics ; Fabaceae/microbiology ; Agrobacterium tumefaciens/genetics ; Symbiosis/genetics ; Phenotype ; Vegetables/genetics ; Transformation, Genetic ; Plants, Genetically Modified
    Language English
    Publishing date 2024-04-16
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2267670-3
    ISSN 1932-6203 ; 1932-6203
    ISSN (online) 1932-6203
    ISSN 1932-6203
    DOI 10.1371/journal.pone.0297547
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: RibBX of

    Nouwen, Nico / Arrighi, Jean-Francois / Gully, Djamel / Giraud, Eric

    Molecular plant-microbe interactions : MPMI

    2020  Volume 34, Issue 1, Page(s) 88–99

    Abstract: Bradyrhizobium ORS285 forms a nitrogen-fixating symbiosis with both Nod factor (NF)-dependent and NF- ... ...

    Abstract Bradyrhizobium ORS285 forms a nitrogen-fixating symbiosis with both Nod factor (NF)-dependent and NF-independent
    MeSH term(s) Bacterial Proteins/genetics ; Bradyrhizobium/enzymology ; Bradyrhizobium/genetics ; Fabaceae/microbiology ; Intracellular Space/microbiology ; Symbiosis/genetics
    Chemical Substances Bacterial Proteins
    Language English
    Publishing date 2020-11-23
    Publishing country United States
    Document type Journal Article
    ZDB-ID 743331-1
    ISSN 1943-7706 ; 0894-0282
    ISSN (online) 1943-7706
    ISSN 0894-0282
    DOI 10.1094/MPMI-07-20-0209-R
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Mapping of QTLs Associated with Biological Nitrogen Fixation Traits in Peanuts (Arachis hypogaea L.) Using an Interspecific Population Derived from the Cross between the Cultivated Species and Its Wild Ancestors

    Nzepang, Darius T. / Gully, Djamel / Nguepjop, Joël R. / Zaiya Zazou, Arlette / Tossim, Hodo-Abalo / Sambou, Aissatou / Rami, Jean-François / Hocher, Valerie / Fall, Saliou / Svistoonoff, Sergio / Fonceka, Daniel

    Genes (Basel). 2023 Mar. 26, v. 14, no. 4

    2023  

    Abstract: Peanuts (Arachis hypogaea L.) are an allotetraploid grain legume mainly cultivated by poor farmers in Africa, in degraded soil and with low input systems. Further understanding nodulation genetic mechanisms could be a relevant option to facilitate the ... ...

    Abstract Peanuts (Arachis hypogaea L.) are an allotetraploid grain legume mainly cultivated by poor farmers in Africa, in degraded soil and with low input systems. Further understanding nodulation genetic mechanisms could be a relevant option to facilitate the improvement of yield and lift up soil without synthetic fertilizers. We used a subset of 83 chromosome segment substitution lines (CSSLs) derived from the cross between a wild synthetic tetraploid AiAd (Arachis ipaensis × Arachis duranensis)⁴× and the cultivated variety Fleur11, and evaluated them for traits related to BNF under shade-house conditions. Three treatments were tested: without nitrogen; with nitrogen; and without nitrogen, but with added0 Bradyrhizobium vignae strain ISRA400. The leaf chlorophyll content and total biomass were used as surrogate traits for BNF. We found significant variations for both traits specially linked to BNF, and four QTLs (quantitative trait loci) were consistently mapped. At all QTLs, the wild alleles decreased the value of the trait, indicating a negative effect on BNF. A detailed characterization of the lines carrying those QTLs in controlled conditions showed that the QTLs affected the nitrogen fixation efficiency, nodule colonization, and development. Our results provide new insights into peanut nodulation mechanisms and could be used to target BNF traits in peanut breeding programs.
    Keywords Arachis duranensis ; Arachis hypogaea ; Arachis ipaensis ; Bradyrhizobium ; allotetraploidy ; biomass ; chromosomes ; cultivars ; leaf chlorophyll content ; nitrogen ; nitrogen fixation ; nodulation ; peanuts ; quantitative traits ; soil degradation ; tetraploidy ; Africa
    Language English
    Dates of publication 2023-0326
    Publishing place Multidisciplinary Digital Publishing Institute
    Document type Article ; Online
    ZDB-ID 2527218-4
    ISSN 2073-4425
    ISSN 2073-4425
    DOI 10.3390/genes14040797
    Database NAL-Catalogue (AGRICOLA)

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  4. Article ; Online: Mapping of QTLs Associated with Biological Nitrogen Fixation Traits in Peanuts (

    Nzepang, Darius T / Gully, Djamel / Nguepjop, Joël R / Zaiya Zazou, Arlette / Tossim, Hodo-Abalo / Sambou, Aissatou / Rami, Jean-François / Hocher, Valerie / Fall, Saliou / Svistoonoff, Sergio / Fonceka, Daniel

    Genes

    2023  Volume 14, Issue 4

    Abstract: Peanuts ( ...

    Abstract Peanuts (
    MeSH term(s) Quantitative Trait Loci/genetics ; Arachis/genetics ; Chromosome Mapping/methods ; Nitrogen Fixation/genetics ; Plant Breeding
    Language English
    Publishing date 2023-03-26
    Publishing country Switzerland
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2527218-4
    ISSN 2073-4425 ; 2073-4425
    ISSN (online) 2073-4425
    ISSN 2073-4425
    DOI 10.3390/genes14040797
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Phylogenetic distribution and evolutionary dynamics of

    Teulet, Albin / Gully, Djamel / Rouy, Zoe / Camuel, Alicia / Koebnik, Ralf / Giraud, Eric / Lassalle, Florent

    Microbial genomics

    2020  Volume 6, Issue 9

    Abstract: ... ...

    Abstract Bradyrhizobium
    MeSH term(s) Bacterial Proteins/genetics ; Bradyrhizobium/classification ; Bradyrhizobium/genetics ; Evolution, Molecular ; Genomics ; Multigene Family ; Peptide Hydrolases/genetics ; Phylogeny ; Symbiosis ; Type III Secretion Systems/genetics
    Chemical Substances Bacterial Proteins ; Type III Secretion Systems ; Peptide Hydrolases (EC 3.4.-)
    Language English
    Publishing date 2020-08-12
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2835258-0
    ISSN 2057-5858 ; 2057-5858
    ISSN (online) 2057-5858
    ISSN 2057-5858
    DOI 10.1099/mgen.0.000407
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: Exploring the cellular surface polysaccharide and root nodule symbiosis characteristics of the

    Wongdee, Jenjira / Piromyou, Pongdet / Songwattana, Pongpan / Greetatorn, Teerana / Boonkerd, Nantakorn / Teaumroong, Neung / Giraud, Eric / Gully, Djamel / Nouwen, Nico / Kiatponglarp, Worawikunya / Tanthanuch, Waraporn / Tittabutr, Panlada

    Microbiology spectrum

    2023  , Page(s) e0194723

    Abstract: The functional significance ... ...

    Abstract The functional significance of
    Language English
    Publishing date 2023-09-08
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2807133-5
    ISSN 2165-0497 ; 2165-0497
    ISSN (online) 2165-0497
    ISSN 2165-0497
    DOI 10.1128/spectrum.01947-23
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: The Pharaoh's snakes of the teasel: New insights into Francis Darwin's observations.

    Vergne, Antoine / Giraud, Eric / Camuel, Alicia / Bardot, Corinne / Billard, Hermine / Bouquet, Clémentin / Corbara, Bruno / Gully, Djamel / Mathonat, Frédéric / Jeanthon, Christian / Mary, Isabelle / Caissard, Jean-Claude / Lehours, Anne-Catherine

    Ecology

    2023  Volume 104, Issue 5, Page(s) e4030

    MeSH term(s) Animals ; Dipsacaceae ; Biological Evolution ; Ants
    Language English
    Publishing date 2023-03-29
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2010140-5
    ISSN 1939-9170 ; 0012-9658
    ISSN (online) 1939-9170
    ISSN 0012-9658
    DOI 10.1002/ecy.4030
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: The Type III Effectome of the Symbiotic

    Busset, Nicolas / Gully, Djamel / Teulet, Albin / Fardoux, Joël / Camuel, Alicia / Cornu, David / Severac, Dany / Giraud, Eric / Mergaert, Peter

    Biomolecules

    2021  Volume 11, Issue 11

    Abstract: ... ...

    Abstract Many
    MeSH term(s) Bradyrhizobium ; Symbiosis ; Type III Secretion Systems/metabolism
    Chemical Substances Type III Secretion Systems
    Language English
    Publishing date 2021-10-28
    Publishing country Switzerland
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2701262-1
    ISSN 2218-273X ; 2218-273X
    ISSN (online) 2218-273X
    ISSN 2218-273X
    DOI 10.3390/biom11111592
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Expanding Knowledge of Methylotrophic Capacity: Structure and Properties of the Rough-Type Lipopolysaccharide from

    Di Lorenzo, Flaviana / Nicolardi, Simone / Marchetti, Roberta / Vanacore, Adele / Gallucci, Noemi / Duda, Katarzyna / Nieto Fabregat, Ferran / Nguyen, Ha Ngoc Anh / Gully, Djamel / Saenz, James / Giraud, Eric / Paduano, Luigi / Molinaro, Antonio / D'Errico, Gerardino / Silipo, Alba

    JACS Au

    2023  Volume 3, Issue 3, Page(s) 929–942

    Abstract: The ability ... ...

    Abstract The ability of
    Language English
    Publishing date 2023-03-09
    Publishing country United States
    Document type Journal Article
    ISSN 2691-3704
    ISSN (online) 2691-3704
    DOI 10.1021/jacsau.3c00025
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article: Permanent draft genome sequence of

    Niang, Diariatou / Gueddou, Abdellatif / Niang, Nogaye / Nzepang, Darius / Sambou, Aissatou / Diouf, Adama / Zaiya, Arlette Z / Cissoko, Maimouna / Gully, Djamel / Nguepjop, Joel-Romaric / Svistoonoff, Sergio / Fonceka, Daniel / Hocher, Valérie / Diouf, Diégane / Fall, Saliou / Tisa, Louis S

    Journal of genomics

    2023  Volume 11, Page(s) 52–57

    Abstract: ... A ... ...

    Abstract A new
    Language English
    Publishing date 2023-11-01
    Publishing country Australia
    Document type Journal Article
    ZDB-ID 2692697-0
    ISSN 1839-9940
    ISSN 1839-9940
    DOI 10.7150/jgen.88302
    Database MEDical Literature Analysis and Retrieval System OnLINE

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