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Article ; Online: Changes of the bacterial composition in duodenal fluid from patients with liver cirrhosis and molecular bacterascites.

Höppner, Jim / Krohn, Sandra / van den Munckhof, Ellen H A / Kallies, René / Herber, Adam / Zeller, Katharina / Tünnemann, Jan / Matz-Soja, Madlen / Chatzinotas, Antonis / Böhm, Stephan / Hoffmeister, Albrecht / Berg, Thomas / Engelmann, Cornelius

Scientific reports

2023  Volume 13, Issue 1, Page(s) 23001

Abstract: Small intestinal bacterial overgrowth and compositional changes of intestinal microbiota are pathomechanistic factors in liver cirrhosis leading to bacterial translocation and infectious complications. We analyzed the quantity and composition of duodenal ...

Abstract Small intestinal bacterial overgrowth and compositional changes of intestinal microbiota are pathomechanistic factors in liver cirrhosis leading to bacterial translocation and infectious complications. We analyzed the quantity and composition of duodenal bacterial DNA (bactDNA) in relation to bactDNA in blood and ascites of patients with liver cirrhosis. Duodenal fluid and corresponding blood and ascites samples from 103 patients with liver cirrhosis were collected. Non-liver disease patients (n = 22) served as controls. BactDNA was quantified by 16S-rRNA gene-based PCR. T-RFLP and 16S-rRNA amplicon sequencing were used to analyze bacterial composition. Duodenal bacterial diversity in cirrhosis was distinct to controls showing significantly higher abundances of Streptococcus, Enterococcus and Veillonella. Patients with bactDNA positive ascites revealed reduced spectrum of core microbiota with Streptococcus as key player of duodenal community and higher prevalence of Granulicatella proving presence of cirrhosis related intestinal dysbiosis. Regarding duodenal fluid bactDNA quantification, no significant differences were found between patients with cirrhosis and controls. Additionally, percentage of subjects with detectable bactDNA in blood did not differ between patients and controls. This study evaluated the diversity of bacterial DNA in different body specimens with potential implications on understanding how intestinal bacterial translocation may affect infectious complications in cirrhosis.
MeSH term(s) Humans ; Ascites/complications ; DNA, Bacterial/analysis ; Ascitic Fluid/microbiology ; Liver Cirrhosis/complications ; Bacteria/genetics ; Fibrosis ; RNA, Ribosomal, 16S/genetics
Chemical Substances DNA, Bacterial ; RNA, Ribosomal, 16S
Language English
Publishing date 2023-12-27
Publishing country England
Document type Journal Article
ZDB-ID 2615211-3
ISSN 2045-2322 ; 2045-2322
ISSN (online) 2045-2322
ISSN 2045-2322
DOI 10.1038/s41598-023-49505-3
Database MEDical Literature Analysis and Retrieval System OnLINE

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