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  1. Article ; Online: Stress-Specific Spatiotemporal Responses of RNA-Binding Proteins in Human Stem-Cell-Derived Motor Neurons.

    Harley, Jasmine / Patani, Rickie

    International journal of molecular sciences

    2020  Volume 21, Issue 21

    Abstract: RNA-binding proteins (RBPs) have been shown to play a key role in the pathogenesis of a variety of neurodegenerative disorders. Amyotrophic lateral sclerosis (ALS) is an exemplar neurodegenerative disease characterised by rapid progression and relatively ...

    Abstract RNA-binding proteins (RBPs) have been shown to play a key role in the pathogenesis of a variety of neurodegenerative disorders. Amyotrophic lateral sclerosis (ALS) is an exemplar neurodegenerative disease characterised by rapid progression and relatively selective motor neuron loss. Nuclear-to-cytoplasmic mislocalisation and accumulation of RBPs have been identified as a pathological hallmark of the disease, yet the spatiotemporal responses of RBPs to different extrinsic stressors in human neurons remain incompletely understood. Here, we used healthy induced pluripotent stem cell (iPSC)-derived motor neurons to model how different types of cellular stress affect the nucleocytoplasmic localisation of key ALS-linked RBPs. We found that osmotic stress robustly induced nuclear loss of TDP-43, SPFQ, FUS, hnRNPA1 and hnRNPK, with characteristic changes in nucleocytoplasmic localisation in an RBP-dependent manner. Interestingly, we found that RBPs displayed stress-dependent characteristics, with unique responses to both heat and oxidative stress. Alongside nucleocytoplasmic protein distribution changes, we identified the formation of stress- and RBP-specific nuclear and cytoplasmic foci. Furthermore, the kinetics of nuclear relocalisation upon recovery from extrinsic stressors was also found to be both stress- and RBP-specific. Importantly, these experiments specifically highlight TDP-43 and FUS, two of the most recognised RBPs in ALS pathogenesis, as exhibiting delayed nuclear relocalisation following stress in healthy human motor neurons as compared to SFPQ, hnRNPA1 and hnRNPK. Notably, ALS-causing valosin containing protein (VCP) mutations did not disrupt the relocalisation dynamics of TDP-43 or FUS in human motor neurons following stress. An increased duration of TDP-43 and FUS within the cytoplasm after stress may render the environment more aggregation-prone, which may be poorly tolerated in the context of ALS and related neurodegenerative disorders. In summary, our study addresses stress-specific spatiotemporal responses of neurodegeneration-related RBPs in human motor neurons. The insights into the nucleocytoplasmic dynamics of RBPs provided here may be informative for future studies examining both disease mechanisms and therapeutic strategy.
    MeSH term(s) Amyotrophic Lateral Sclerosis/metabolism ; Amyotrophic Lateral Sclerosis/physiopathology ; Cell Nucleus/metabolism ; Cytoplasm/metabolism ; DNA-Binding Proteins/metabolism ; Humans ; Induced Pluripotent Stem Cells/metabolism ; Motor Neurons/metabolism ; Motor Neurons/physiology ; Mutation ; Neurodegenerative Diseases/metabolism ; Oxidative Stress/physiology ; Protein Transport/physiology ; RNA-Binding Protein FUS/metabolism ; RNA-Binding Proteins/metabolism ; RNA-Binding Proteins/physiology ; Spatio-Temporal Analysis
    Chemical Substances DNA-Binding Proteins ; FUS protein, human ; RNA-Binding Protein FUS ; RNA-Binding Proteins ; TARDBP protein, human
    Language English
    Publishing date 2020-11-06
    Publishing country Switzerland
    Document type Journal Article
    ZDB-ID 2019364-6
    ISSN 1422-0067 ; 1422-0067 ; 1661-6596
    ISSN (online) 1422-0067
    ISSN 1422-0067 ; 1661-6596
    DOI 10.3390/ijms21218346
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: The Interplay of RNA Binding Proteins, Oxidative Stress and Mitochondrial Dysfunction in ALS

    Harley, Jasmine / Clarke, Benjamin E / Patani, Rickie

    Antioxidants. 2021 Apr. 02, v. 10, no. 4

    2021  

    Abstract: RNA binding proteins fulfil a wide number of roles in gene expression. Multiple mechanisms of RNA binding protein dysregulation have been implicated in the pathomechanisms of several neurodegenerative diseases including amyotrophic lateral sclerosis (ALS) ...

    Abstract RNA binding proteins fulfil a wide number of roles in gene expression. Multiple mechanisms of RNA binding protein dysregulation have been implicated in the pathomechanisms of several neurodegenerative diseases including amyotrophic lateral sclerosis (ALS). Oxidative stress and mitochondrial dysfunction also play important roles in these diseases. In this review, we highlight the mechanistic interplay between RNA binding protein dysregulation, oxidative stress and mitochondrial dysfunction in ALS. We also discuss different potential therapeutic strategies targeting these pathways.
    Keywords RNA ; amyotrophic lateral sclerosis ; gene expression ; mitochondria ; oxidative stress ; therapeutics
    Language English
    Dates of publication 2021-0402
    Publishing place Multidisciplinary Digital Publishing Institute
    Document type Article
    Note NAL-AP-2-clean
    ZDB-ID 2704216-9
    ISSN 2076-3921
    ISSN 2076-3921
    DOI 10.3390/antiox10040552
    Database NAL-Catalogue (AGRICOLA)

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  3. Article: The Interplay of RNA Binding Proteins, Oxidative Stress and Mitochondrial Dysfunction in ALS.

    Harley, Jasmine / Clarke, Benjamin E / Patani, Rickie

    Antioxidants (Basel, Switzerland)

    2021  Volume 10, Issue 4

    Abstract: RNA binding proteins fulfil a wide number of roles in gene expression. Multiple mechanisms of RNA binding protein dysregulation have been implicated in the pathomechanisms of several neurodegenerative diseases including amyotrophic lateral sclerosis (ALS) ...

    Abstract RNA binding proteins fulfil a wide number of roles in gene expression. Multiple mechanisms of RNA binding protein dysregulation have been implicated in the pathomechanisms of several neurodegenerative diseases including amyotrophic lateral sclerosis (ALS). Oxidative stress and mitochondrial dysfunction also play important roles in these diseases. In this review, we highlight the mechanistic interplay between RNA binding protein dysregulation, oxidative stress and mitochondrial dysfunction in ALS. We also discuss different potential therapeutic strategies targeting these pathways.
    Language English
    Publishing date 2021-04-02
    Publishing country Switzerland
    Document type Journal Article ; Review
    ZDB-ID 2704216-9
    ISSN 2076-3921
    ISSN 2076-3921
    DOI 10.3390/antiox10040552
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: TDP-43 and FUS mislocalization in VCP mutant motor neurons is reversed by pharmacological inhibition of the VCP D2 ATPase domain.

    Harley, Jasmine / Hagemann, Cathleen / Serio, Andrea / Patani, Rickie

    Brain communications

    2021  Volume 3, Issue 3, Page(s) fcab166

    Abstract: RNA binding proteins have been shown to play a key role in the pathogenesis of amyotrophic lateral sclerosis (ALS). Mutations in valosin-containing protein ( ...

    Abstract RNA binding proteins have been shown to play a key role in the pathogenesis of amyotrophic lateral sclerosis (ALS). Mutations in valosin-containing protein (
    Language English
    Publishing date 2021-08-06
    Publishing country England
    Document type Journal Article ; Comment
    ISSN 2632-1297
    ISSN (online) 2632-1297
    DOI 10.1093/braincomms/fcab166
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Image-based deep learning reveals the responses of human motor neurons to stress and VCP-related ALS.

    Verzat, Colombine / Harley, Jasmine / Patani, Rickie / Luisier, Raphaëlle

    Neuropathology and applied neurobiology

    2021  Volume 48, Issue 2, Page(s) e12770

    Abstract: Aims: Although morphological attributes of cells and their substructures are recognised readouts of physiological or pathophysiological states, these have been relatively understudied in amyotrophic lateral sclerosis (ALS) research.: Methods: In this ...

    Abstract Aims: Although morphological attributes of cells and their substructures are recognised readouts of physiological or pathophysiological states, these have been relatively understudied in amyotrophic lateral sclerosis (ALS) research.
    Methods: In this study, we integrate multichannel fluorescence high-content microscopy data with deep learning imaging methods to reveal-directly from unsegmented images-novel neurite-associated morphological perturbations associated with (ALS-causing) VCP-mutant human motor neurons (MNs).
    Results: Surprisingly, we reveal that previously unrecognised disease-relevant information is withheld in broadly used and often considered 'generic' biological markers of nuclei (DAPI) and neurons (
    Conclusions: Our study therefore reveals disease-relevant information contained in a range of both generic and more specific fluorescent markers and establishes the use of image-based deep learning methods for rapid, automated and unbiased identification of biological hypotheses.
    MeSH term(s) Amyotrophic Lateral Sclerosis/metabolism ; Deep Learning ; Humans ; Induced Pluripotent Stem Cells/metabolism ; Motor Neurons/metabolism ; Neurites/metabolism ; Phenotype
    Language English
    Publishing date 2021-10-18
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 80371-6
    ISSN 1365-2990 ; 0305-1846
    ISSN (online) 1365-2990
    ISSN 0305-1846
    DOI 10.1111/nan.12770
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article ; Online: FUS is lost from nuclei and gained in neurites of motor neurons in a human stem cell model of VCP-related ALS.

    Harley, Jasmine / Hagemann, Cathleen / Serio, Andrea / Patani, Rickie

    Brain : a journal of neurology

    2020  Volume 143, Issue 12, Page(s) e103

    MeSH term(s) Amyotrophic Lateral Sclerosis/genetics ; Amyotrophic Lateral Sclerosis/metabolism ; Cell Nucleus/metabolism ; Cytoplasm/metabolism ; Humans ; Induced Pluripotent Stem Cells/metabolism ; Motor Neurons/metabolism ; Mutation ; Neural Stem Cells/metabolism ; Neurites/metabolism ; RNA-Binding Protein FUS/genetics ; RNA-Binding Protein FUS/metabolism ; Valosin Containing Protein/genetics ; Valosin Containing Protein/metabolism
    Chemical Substances FUS protein, human ; RNA-Binding Protein FUS ; VCP protein, human (EC 3.6.4.6) ; Valosin Containing Protein (EC 3.6.4.6)
    Language English
    Publishing date 2020-11-30
    Publishing country England
    Document type Letter ; Research Support, Non-U.S. Gov't
    ZDB-ID 80072-7
    ISSN 1460-2156 ; 0006-8950
    ISSN (online) 1460-2156
    ISSN 0006-8950
    DOI 10.1093/brain/awaa339
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Amplifying the Heat Shock Response Ameliorates ALS and FTD Pathology in Mouse and Human Models.

    Ahmed, Mhoriam / Spicer, Charlotte / Harley, Jasmine / Taylor, J Paul / Hanna, Michael / Patani, Rickie / Greensmith, Linda

    Molecular neurobiology

    2023  Volume 60, Issue 12, Page(s) 6896–6915

    Abstract: Amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD) are now known as parts of a disease spectrum with common pathological features and genetic causes. However, as both conditions are clinically heterogeneous, patient groups may be ... ...

    Abstract Amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD) are now known as parts of a disease spectrum with common pathological features and genetic causes. However, as both conditions are clinically heterogeneous, patient groups may be phenotypically similar but pathogenically and genetically variable. Despite numerous clinical trials, there remains no effective therapy for these conditions, which, in part, may be due to challenges of therapy development in a heterogeneous patient population. Disruption to protein homeostasis is a key feature of different forms of ALS and FTD. Targeting the endogenous protein chaperone system, the heat shock response (HSR) may, therefore, be a potential therapeutic approach. We conducted a preclinical study of a known pharmacological amplifier of the HSR, called arimoclomol, in mice with a mutation in valosin-containing protein (VCP) which causes both ALS and FTD in patients. We demonstrate that amplification of the HSR ameliorates the ALS/FTD-like phenotype in the spinal cord and brain of mutant VCP mice and prevents neuronal loss, replicating our earlier findings in the SOD1 mouse model of ALS. Moreover, in human cell models, we demonstrate improvements in pathology upon arimoclomol treatment in mutant VCP patient fibroblasts and iPSC-derived motor neurons. Our findings suggest that targeting of the HSR may have therapeutic potential, not only in non-SOD1 ALS, but also for the treatment of FTD.
    MeSH term(s) Humans ; Animals ; Mice ; Amyotrophic Lateral Sclerosis/drug therapy ; Amyotrophic Lateral Sclerosis/genetics ; Amyotrophic Lateral Sclerosis/metabolism ; Frontotemporal Dementia/drug therapy ; Frontotemporal Dementia/genetics ; Frontotemporal Dementia/pathology ; Hydroxylamines/therapeutic use ; Heat-Shock Response ; Mutation/genetics
    Chemical Substances arimoclomol (EUT3557RT5) ; Hydroxylamines
    Language English
    Publishing date 2023-07-29
    Publishing country United States
    Document type Journal Article
    ZDB-ID 645020-9
    ISSN 1559-1182 ; 0893-7648
    ISSN (online) 1559-1182
    ISSN 0893-7648
    DOI 10.1007/s12035-023-03509-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Physiological intron retaining transcripts in the cytoplasm abound during human motor neurogenesis.

    Petrić Howe, Marija / Crerar, Hamish / Neeves, Jacob / Harley, Jasmine / Tyzack, Giulia E / Klein, Pierre / Ramos, Andres / Patani, Rickie / Luisier, Raphaëlle

    Genome research

    2022  Volume 32, Issue 10, Page(s) 1808–1825

    Abstract: Intron retention (IR) is now recognized as a dominant splicing event during motor neuron (MN) development; however, the role and regulation of intron-retaining transcripts (IRTs) localized to the cytoplasm remain particularly understudied. Here we show ... ...

    Abstract Intron retention (IR) is now recognized as a dominant splicing event during motor neuron (MN) development; however, the role and regulation of intron-retaining transcripts (IRTs) localized to the cytoplasm remain particularly understudied. Here we show that IR is a physiological process that is spatiotemporally regulated during MN lineage restriction and that IRTs in the cytoplasm are detected in as many as 13% (
    MeSH term(s) Humans ; Introns ; Cytoplasm/genetics ; Cytoplasm/metabolism ; Motor Neurons ; Neurogenesis/genetics ; MicroRNAs/genetics ; MicroRNAs/metabolism
    Chemical Substances MicroRNAs
    Language English
    Publishing date 2022-09-30
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 1284872-4
    ISSN 1549-5469 ; 1088-9051 ; 1054-9803
    ISSN (online) 1549-5469
    ISSN 1088-9051 ; 1054-9803
    DOI 10.1101/gr.276898.122
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Telomere shortening induces aging-associated phenotypes in hiPSC-derived neurons and astrocytes.

    Harley, Jasmine / Santosa, Munirah Mohamad / Ng, Chong Yi / Grinchuk, Oleg V / Hor, Jin-Hui / Liang, Yajing / Lim, Valerie Jingwen / Tee, Wee Wei / Ong, Derrick Sek Tong / Ng, Shi-Yan

    Biogerontology

    2023  Volume 25, Issue 2, Page(s) 341–360

    Abstract: Telomere shortening is a well-established hallmark of cellular aging. Telomerase reverse transcriptase (TERT) plays a crucial role in maintaining the length of telomeres, which are specialised protective caps at the end of chromosomes. The lack of in ... ...

    Abstract Telomere shortening is a well-established hallmark of cellular aging. Telomerase reverse transcriptase (TERT) plays a crucial role in maintaining the length of telomeres, which are specialised protective caps at the end of chromosomes. The lack of in vitro aging models, particularly for the central nervous system (CNS), has impeded progress in understanding aging and age-associated neurodegenerative diseases. In this study, we aimed to explore the possibility of inducing aging-associated features in cell types of the CNS using hiPSC (human induced pluripotent stem cell) technology. To achieve this, we utilised CRISPR/Cas9 to generate hiPSCs with a loss of telomerase function and shortened telomeres. Through directed differentiation, we generated motor neurons and astrocytes to investigate whether telomere shortening could lead to age-associated phenotypes. Our findings revealed that shortened telomeres induced age-associated characteristics in both motor neurons and astrocytes including increased cellular senescence, heightened inflammation, and elevated DNA damage. We also observed cell-type specific age-related morphology changes. Additionally, our study highlighted the fundamental role of TERT and telomere shortening in neural progenitor cell (NPC) proliferation and neuronal differentiation. This study serves as a proof of concept that telomere shortening can effectively induce aging-associated phenotypes, thereby providing a valuable tool to investigate age-related decline and neurodegenerative diseases.
    MeSH term(s) Humans ; Telomere Shortening ; Induced Pluripotent Stem Cells/metabolism ; Astrocytes/metabolism ; Telomerase/genetics ; Telomere ; Motor Neurons/metabolism ; Phenotype ; Neurodegenerative Diseases
    Chemical Substances Telomerase (EC 2.7.7.49)
    Language English
    Publishing date 2023-11-21
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 2047160-9
    ISSN 1573-6768 ; 1389-5729
    ISSN (online) 1573-6768
    ISSN 1389-5729
    DOI 10.1007/s10522-023-10076-5
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Nucleocytoplasmic mRNA redistribution accompanies RNA binding protein mislocalization in ALS motor neurons and is restored by VCP ATPase inhibition.

    Ziff, Oliver J / Harley, Jasmine / Wang, Yiran / Neeves, Jacob / Tyzack, Giulia / Ibrahim, Fairouz / Skehel, Mark / Chakrabarti, Anob M / Kelly, Gavin / Patani, Rickie

    Neuron

    2023  Volume 111, Issue 19, Page(s) 3011–3027.e7

    Abstract: Amyotrophic lateral sclerosis (ALS) is characterized by nucleocytoplasmic mislocalization of the RNA-binding protein (RBP) TDP-43. However, emerging evidence suggests more widespread mRNA and protein mislocalization. Here, we employed nucleocytoplasmic ... ...

    Abstract Amyotrophic lateral sclerosis (ALS) is characterized by nucleocytoplasmic mislocalization of the RNA-binding protein (RBP) TDP-43. However, emerging evidence suggests more widespread mRNA and protein mislocalization. Here, we employed nucleocytoplasmic fractionation, RNA sequencing, and mass spectrometry to investigate the localization of mRNA and protein in induced pluripotent stem cell-derived motor neurons (iPSMNs) from ALS patients with TARDBP and VCP mutations. ALS mutant iPSMNs exhibited extensive nucleocytoplasmic mRNA redistribution, RBP mislocalization, and splicing alterations. Mislocalized proteins exhibited a greater affinity for redistributed transcripts, suggesting a link between RBP mislocalization and mRNA redistribution. Notably, treatment with ML240, a VCP ATPase inhibitor, partially restored mRNA and protein localization in ALS mutant iPSMNs. ML240 induced changes in the VCP interactome and lysosomal localization and reduced oxidative stress and DNA damage. These findings emphasize the link between RBP mislocalization and mRNA redistribution in ALS motor neurons and highlight the therapeutic potential of VCP inhibition.
    MeSH term(s) Humans ; Amyotrophic Lateral Sclerosis/genetics ; Amyotrophic Lateral Sclerosis/metabolism ; Adenosine Triphosphatases/genetics ; Adenosine Triphosphatases/metabolism ; RNA, Messenger/metabolism ; Motor Neurons/metabolism ; RNA-Binding Proteins/metabolism ; Valosin Containing Protein/genetics
    Chemical Substances Adenosine Triphosphatases (EC 3.6.1.-) ; RNA, Messenger ; RNA-Binding Proteins ; VCP protein, human (EC 3.6.4.6) ; Valosin Containing Protein (EC 3.6.4.6)
    Language English
    Publishing date 2023-07-21
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 808167-0
    ISSN 1097-4199 ; 0896-6273
    ISSN (online) 1097-4199
    ISSN 0896-6273
    DOI 10.1016/j.neuron.2023.06.019
    Database MEDical Literature Analysis and Retrieval System OnLINE

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