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  1. Article: Fungal pretreatment of sugarcane bagasse: a green pathway to improve saccharification and ethanol production

    Hartmann, Caroline / Fontana, Roselei Claudete / de Siqueira, Félix Gonçalves / Camassola, Marli

    BioEnergy research. 2022 June, v. 15, no. 2

    2022  

    Abstract: Biological pretreatment was investigated to increase ethanol production from lignocellulosic biomass, like sugarcane bagasse. Enzyme secretion, changes in substrate composition, enzymatic hydrolysis, and ethanol yield after pretreatment by different ... ...

    Abstract Biological pretreatment was investigated to increase ethanol production from lignocellulosic biomass, like sugarcane bagasse. Enzyme secretion, changes in substrate composition, enzymatic hydrolysis, and ethanol yield after pretreatment by different basidiomycetes were evaluated. Analysis by Fourier transform infrared spectroscopy showed that Pleurotus pulmonarius PS2001 and Trametes villosa 82I6 promoted more extensive selective modifications in the lignin content. Glucose release during enzymatic hydrolysis of samples pretreated with P. pulmonarius PS2001 for 35, 42, and 49 days and with T. villosa 82I6 for 21, 28, and 49 days were higher than the control (48.5 ± 2.38 mg/g), i.e., 68.4 ± 0.7, 76.3 ± 1.6, and 76.5 ± 2.1 mg/g and 70.9 ± 8.3, 77.8 ± 5.8, and 77.6 ± 4.2 mg/g, respectively. During the fermentation of hydrolysates of samples pretreated with T. villosa 82I6 for 14, 28, and 49 days, a maximum ethanol yield of 17.8 ± 1.9, 19.1 ± 2.8, and 20.2 ± 0.5 mg/g, respectively, was achieved. A positive effect of biological pretreatment on hydrolysis and fermentation was demonstrated.
    Keywords Fourier transform infrared spectroscopy ; Pleurotus pulmonarius ; Trametes villosa ; bioenergy ; biomass ; enzymatic hydrolysis ; enzymes ; ethanol ; ethanol production ; fermentation ; fungi ; glucose ; hydrolysis ; lignin content ; lignocellulose ; research ; saccharification ; secretion ; sugarcane bagasse
    Language English
    Dates of publication 2022-06
    Size p. 1130-1143.
    Publishing place Springer US
    Document type Article
    ZDB-ID 2424546-X
    ISSN 1939-1242 ; 1939-1234
    ISSN (online) 1939-1242
    ISSN 1939-1234
    DOI 10.1007/s12155-021-10329-6
    Database NAL-Catalogue (AGRICOLA)

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  2. Article: Wohlbefinden als wichtiger Bestandteil des Hygienemanagementsystems im Tierheim am Beispiel der Katzenhaltung

    Hartmann, Caroline

    Amtstierärztlicher Dienst und Lebensmittelkontrolle

    2013  Volume 20, Issue 3, Page(s) 179

    Language German
    Document type Article
    ZDB-ID 1191273-x
    ISSN 0945-3296
    Database Current Contents Nutrition, Environment, Agriculture

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  3. Article: The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA

    Roulé, Thomas / Christ, Aurelie / Hussain, Nosheen / Huang, Ying / Hartmann, Caroline / Benhamed, Moussa / Gutierrez-Marcos, Jose / Ariel, Federico / Crespi, Martin / Blein, Thomas

    Molecular plant. 2022 Feb. 07,

    2022  

    Abstract: Clustered organization of biosynthetic non-homologous genes is emerging as a characteristic feature of plant genomes. The co-regulation of clustered genes seems to largely depend on epigenetic reprogramming and three-dimensional chromatin conformation. ... ...

    Abstract Clustered organization of biosynthetic non-homologous genes is emerging as a characteristic feature of plant genomes. The co-regulation of clustered genes seems to largely depend on epigenetic reprogramming and three-dimensional chromatin conformation. In this study, we identified the long non-coding RNA (lncRNA) MARneral Silencing (MARS), localized inside the Arabidopsis marneral cluster, which controls the local epigenetic activation of its surrounding region in response to abscisic acid (ABA). MARS modulates the POLYCOMB REPRESSIVE COMPLEX 1 (PRC1) component LIKE HETEROCHROMATIN PROTEIN 1 (LHP1) binding throughout the cluster in a dose-dependent manner, determining H3K27me3 deposition and chromatin condensation. In response to ABA, MARS decoys LHP1 away from the cluster and promotes the formation of a chromatin loop bringing together the MARNERAL SYNTHASE 1 (MRN1) locus and a distal ABA-responsive enhancer. The enrichment of co-regulated lncRNAs in clustered metabolic genes in Arabidopsis suggests that the acquisition of novel non-coding transcriptional units may constitute an additional regulatory layer driving the evolution of biosynthetic pathways.
    Keywords Arabidopsis ; biosynthesis ; chromatin ; dose response ; epigenetics ; evolution ; loci ; non-coding RNA ; transcription (genetics)
    Language English
    Dates of publication 2022-0207
    Publishing place Elsevier Inc.
    Document type Article
    Note Pre-press version
    ZDB-ID 2393618-6
    ISSN 1752-9867 ; 1674-2052
    ISSN (online) 1752-9867
    ISSN 1674-2052
    DOI 10.1016/j.molp.2022.02.007
    Database NAL-Catalogue (AGRICOLA)

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  4. Article ; Online: Root Development in Medicago truncatula: Lessons from Genetics to Functional Genomics.

    Proust, Hélène / Hartmann, Caroline / Crespi, Martin / Lelandais-Brière, Christine

    Methods in molecular biology (Clifton, N.J.)

    2018  Volume 1822, Page(s) 205–239

    Abstract: This decade introduced "omics" approaches, such as genomics, transcriptomics, proteomics, and metabolomics in association with reverse and forward genetic approaches, developed earlier, to try to identify molecular pathways involved in the development or ...

    Abstract This decade introduced "omics" approaches, such as genomics, transcriptomics, proteomics, and metabolomics in association with reverse and forward genetic approaches, developed earlier, to try to identify molecular pathways involved in the development or in the response to environmental conditions as well as in animals and plants. This review summarizes studies that utilized "omics" strategies to unravel the root development in the model legume Medicago truncatula and how external factors such as soil mineral status or the presence of bacteria and fungi affect root system architecture in this species. We also compare these "omics" data to the knowledges concerning the Arabidopsis thaliana root development, nowadays considered as the model of allorhiz root systems. However, unlike legumes, this species is unable to interact with soil nitrogen-fixing rhizobia and arbuscular-mycorrhizal (AM) fungi to develop novel root-derived symbiotic structures. Differences in root organization, development, and regulatory pathways between these two model species have been highlighted.
    MeSH term(s) Environment ; Gene Expression Regulation, Plant ; Genome, Plant ; Genomics/methods ; Medicago truncatula/genetics ; Medicago truncatula/growth & development ; Medicago truncatula/metabolism ; Plant Development/genetics ; Plant Growth Regulators/metabolism ; Plant Proteins/genetics ; Plant Proteins/metabolism ; Plant Roots/genetics
    Chemical Substances Plant Growth Regulators ; Plant Proteins
    Language English
    Publishing date 2018-07-24
    Publishing country United States
    Document type Journal Article ; Review
    ISSN 1940-6029
    ISSN (online) 1940-6029
    DOI 10.1007/978-1-4939-8633-0_15
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Book ; Thesis: Anwendung organokatalytischer Strategien zur Synthese biologisch-aktiver Strukturen und Untersuchung NHC-Palladium-katalysierter Prozesse

    Hartmann, Caroline

    (Beiträge zur organischen Synthese ; 16)

    2009  

    Author's details von Caroline Hartmann
    Series title Beiträge zur organischen Synthese ; 16
    Keywords Asymmetrische Synthese ; Palladiumkomplexe ; Kupplungsreaktion ; Homogene Katalyse ; Aminosäurederivate ; Alpha-Stellung ; Organokatalyse ; Heterocyclische Carbene
    Language German
    Size 246 S., Ill., graph. Darst.
    Publisher Logos-Verl
    Publishing place Berlin
    Document type Book ; Thesis
    Thesis / German Habilitation thesis Univ., Diss.--Karlsruhe, 2009
    ISBN 9783832523633 ; 3832523634
    Database Library catalogue of the German National Library of Science and Technology (TIB), Hannover

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  6. Article ; Online: The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA.

    Roulé, Thomas / Christ, Aurelie / Hussain, Nosheen / Huang, Ying / Hartmann, Caroline / Benhamed, Moussa / Gutierrez-Marcos, Jose / Ariel, Federico / Crespi, Martin / Blein, Thomas

    Molecular plant

    2022  Volume 15, Issue 5, Page(s) 840–856

    Abstract: Clustered organization of biosynthetic non-homologous genes is emerging as a characteristic feature of plant genomes. The co-regulation of clustered genes seems to largely depend on epigenetic reprogramming and three-dimensional chromatin conformation. ... ...

    Abstract Clustered organization of biosynthetic non-homologous genes is emerging as a characteristic feature of plant genomes. The co-regulation of clustered genes seems to largely depend on epigenetic reprogramming and three-dimensional chromatin conformation. In this study, we identified the long non-coding RNA (lncRNA) MARneral Silencing (MARS), localized inside the Arabidopsis marneral cluster, which controls the local epigenetic activation of its surrounding region in response to abscisic acid (ABA). MARS modulates the POLYCOMB REPRESSIVE COMPLEX 1 (PRC1) component LIKE HETEROCHROMATIN PROTEIN 1 (LHP1) binding throughout the cluster in a dose-dependent manner, determining H3K27me3 deposition and chromatin condensation. In response to ABA, MARS decoys LHP1 away from the cluster and promotes the formation of a chromatin loop bringing together the MARNERAL SYNTHASE 1 (MRN1) locus and a distal ABA-responsive enhancer. The enrichment of co-regulated lncRNAs in clustered metabolic genes in Arabidopsis suggests that the acquisition of novel non-coding transcriptional units may constitute an additional regulatory layer driving the evolution of biosynthetic pathways.
    MeSH term(s) Abscisic Acid/pharmacology ; Arabidopsis/genetics ; Chromatin/genetics ; Chromobox Protein Homolog 5 ; Epigenesis, Genetic ; RNA, Long Noncoding/genetics ; Triterpenes
    Chemical Substances Chromatin ; RNA, Long Noncoding ; Triterpenes ; marneral ; Chromobox Protein Homolog 5 (107283-02-3) ; Abscisic Acid (72S9A8J5GW)
    Language English
    Publishing date 2022-02-09
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2393618-6
    ISSN 1752-9867 ; 1674-2052
    ISSN (online) 1752-9867
    ISSN 1674-2052
    DOI 10.1016/j.molp.2022.02.007
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Book ; Online ; Thesis: Untersuchungen zur Zusammensetzung von Reptilieneiern

    Hartmann, Caroline Maria

    2009  

    Author's details vorgelegt von Caroline Maria Hartmann
    Language German
    Size Online-Ressource
    Document type Book ; Online ; Thesis
    Thesis / German Habilitation thesis Univ., Diss.--München, 2009
    Database Special collection on veterinary medicine and general parasitology

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  8. Article ; Online: Stable Inactivation of MicroRNAs in Medicago truncatula Roots.

    Proust, Hélène / Bazin, Jérémie / Sorin, Céline / Hartmann, Caroline / Crespi, Martin / Lelandais-Brière, Christine

    Methods in molecular biology (Clifton, N.J.)

    2018  Volume 1822, Page(s) 123–132

    Abstract: MicroRNAs are key regulators in the development processes or stress responses in plants. In the last decade, several conserved or non-conserved microRNAs have been identified in Medicago truncatula. Different strategies leading to the inactivation of ... ...

    Abstract MicroRNAs are key regulators in the development processes or stress responses in plants. In the last decade, several conserved or non-conserved microRNAs have been identified in Medicago truncatula. Different strategies leading to the inactivation of microRNAs in plants have been described. Here, we propose a protocol for an effective inactivation of microRNAs using a STTM strategy in M. truncatula transgenic roots.
    MeSH term(s) Agrobacterium ; Gene Expression Profiling ; Gene Expression Regulation, Plant ; Gene Silencing ; Medicago truncatula/genetics ; Medicago truncatula/microbiology ; MicroRNAs/genetics ; Plant Roots/genetics ; RNA Interference ; Transformation, Genetic
    Chemical Substances MicroRNAs
    Language English
    Publishing date 2018-07-24
    Publishing country United States
    Document type Journal Article
    ISSN 1940-6029
    ISSN (online) 1940-6029
    DOI 10.1007/978-1-4939-8633-0_9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article: Noncoding RNAs, Emerging Regulators in Root Endosymbioses.

    Lelandais-Brière, Christine / Moreau, Jérémy / Hartmann, Caroline / Crespi, Martin

    Molecular plant-microbe interactions : MPMI

    2016  Volume 29, Issue 3, Page(s) 170–180

    Abstract: Endosymbiosis interactions allow plants to grow in nutrient-deficient soil environments. The arbuscular mycorrhizal (AM) symbiosis is an ancestral interaction between land plants and fungi, whereas nitrogen-fixing symbioses are highly specific for ... ...

    Abstract Endosymbiosis interactions allow plants to grow in nutrient-deficient soil environments. The arbuscular mycorrhizal (AM) symbiosis is an ancestral interaction between land plants and fungi, whereas nitrogen-fixing symbioses are highly specific for certain plants, notably major crop legumes. The signaling pathways triggered by specific lipochitooligosaccharide molecules involved in these interactions have common components that also overlap with plant root development. These pathways include receptor-like kinases, transcription factors (TFs), and various intermediate signaling effectors, including noncoding (nc)RNAs. These latter molecules have emerged as major regulators of gene expression and small ncRNAs, composed of micro (mi)RNAs and small interfering (si)RNAs, are known to control gene expression at transcriptional (chromatin) or posttranscriptional levels. In this review, we describe exciting recent data connecting variants of conserved si/miRNAs with the regulation of TFs, such as NSP2, NFY-A1, auxin-response factors, and AP2-like proteins, known to be involved in symbiosis. The link between hormonal regulations and these si- and miRNA-TF nodes is proposed in a model in which different feedback loops or regulations controlling endosymbiosis signaling are integrated. The diversity and emerging regulatory networks of young legume miRNAs are also highlighted.
    MeSH term(s) Mycorrhizae/physiology ; Nitrogen Fixation/physiology ; Plant Roots/microbiology ; RNA, Fungal/genetics ; RNA, Fungal/metabolism ; RNA, Untranslated/genetics ; RNA, Untranslated/metabolism ; Symbiosis
    Chemical Substances RNA, Fungal ; RNA, Untranslated
    Language English
    Publishing date 2016-03
    Publishing country United States
    Document type Journal Article ; Review
    ZDB-ID 743331-1
    ISSN 1943-7706 ; 0894-0282
    ISSN (online) 1943-7706
    ISSN 0894-0282
    DOI 10.1094/MPMI-10-15-0240-FI
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Book ; Online ; Thesis: Untersuchungen zur Zusammensetzung von Reptilieneiern

    Hartmann, Caroline Maria [Verfasser]

    2009  

    Author's details vorgelegt von Caroline Maria Hartmann
    Keywords Tiere (Zoologie) ; Animals (Zoology)
    Subject code sg590
    Language German
    Document type Book ; Online ; Thesis
    Database Digital theses on the web

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