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  1. Article ; Online: Longitudinal monitoring of STAT3 phosphorylation and histologic outcome of tofacitinib therapy in patients with ulcerative colitis.

    Verstockt, Bram / Volk, Valery / Jaeckel, Charlot / Alsoud, Dahham / Sabino, João / Nikolaus, Susanna / Outtier, An / Krönke, Nicole / Feuerhake, Friedrich / De Hertogh, Gert / Rosenstiel, Philip / Vermeire, Séverine / Schreiber, Stefan / Ferrante, Marc / Aden, Konrad

    Alimentary pharmacology & therapeutics

    2022  Volume 56, Issue 2, Page(s) 282–291

    Abstract: Background: Tofacitinib is the first in class, pan-JAK inhibitor approved for ulcerative colitis (UC). Clinical efficacy has been shown, but long-term real-life endoscopic and histologic data are lacking.: Aim: To investigate the effects of ... ...

    Abstract Background: Tofacitinib is the first in class, pan-JAK inhibitor approved for ulcerative colitis (UC). Clinical efficacy has been shown, but long-term real-life endoscopic and histologic data are lacking.
    Aim: To investigate the effects of tofacitinib in patients with refractory UC focussing on endoscopic, histologic and molecular outcomes, including STAT3 phosphorylation (pSTAT3) detection in the spatial context of mucosal inflammation METHODS: We prospectively monitored 59 highly refractory patients (96.7% anti-TNF exposure, 91.7% vedolizumab exposure) initiating tofacitinib at two IBD referral centres and assessed outcome at the end of induction and after 48 weeks of therapy. Endoscopic improvement was defined as a Mayo endoscopic subscore ≤1, endoscopic and histologic remission as Mayo endoscopic subscore 0 and Nancy histologic score 0. Multiplex immunohistochemistry with multispectral imaging was used to assess pSTAT3.
    Results: Endoscopic improvement was achieved by 24.4% and 30.5% of patients at weeks 8 and 48, respectively. Endoscopic and histologic remission rates were 11.1%, 23.7 and 16.7%, 21.4%, respectively. Endoscopic improvement at week 8 was significantly associated with treatment continuation in the long-term (72.7% vs 20.6%, p = 0.003). Although we observed a gradual decrease of mucosal pSTAT3 levels in both remitters and non-remitters (p < 0.05), no association with treatment outcome could be demonstrated. However, lamina propria pSTAT3 was significantly associated with the Nancy Histologic index (p = 0.004).
    Conclusion: Tofacitinib can induce and maintain endoscopic and histologic remission in up to one-quarter of highly refractory UC patients. Longitudinal monitoring of nuclear pSTAT3 in mucosal tissue compartments reflects distinctive on-target effects, independently of long-term treatment outcomes.
    MeSH term(s) Colitis, Ulcerative/diagnosis ; Colitis, Ulcerative/drug therapy ; Humans ; Janus Kinase Inhibitors/therapeutic use ; Phosphorylation ; Piperidines/therapeutic use ; Pyrimidines/therapeutic use ; Remission Induction ; STAT3 Transcription Factor/metabolism ; Treatment Outcome
    Chemical Substances Janus Kinase Inhibitors ; Piperidines ; Pyrimidines ; STAT3 Transcription Factor ; STAT3 protein, human ; tofacitinib (87LA6FU830)
    Language English
    Publishing date 2022-04-28
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 639012-2
    ISSN 1365-2036 ; 0269-2813 ; 0953-0673
    ISSN (online) 1365-2036
    ISSN 0269-2813 ; 0953-0673
    DOI 10.1111/apt.16955
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Patient Reported Outcomes in Chronic Inflammatory Diseases: Current State, Limitations and Perspectives.

    Tran, Florian / Schirmer, Jan Henrik / Ratjen, Ilka / Lieb, Wolfgang / Helliwell, Philip / Burisch, Johan / Schulz, Juliane / Schrinner, Florian / Jaeckel, Charlot / Müller-Ladner, Ulf / Schreiber, Stefan / Hoyer, Bimba F

    Frontiers in immunology

    2021  Volume 12, Page(s) 614653

    Abstract: Chronic inflammatory diseases (CID) are emerging disorders which do not only affect specific organs with respective clinical symptoms but can also affect various aspects of life, such as emotional distress, anxiety, fatigue and quality of life. These ... ...

    Abstract Chronic inflammatory diseases (CID) are emerging disorders which do not only affect specific organs with respective clinical symptoms but can also affect various aspects of life, such as emotional distress, anxiety, fatigue and quality of life. These facets of chronic disease are often not recognized in the therapy of CID patients. Furthermore, the symptoms and patient-reported outcomes often do not correlate well with the actual inflammatory burden. The discrepancy between patient-reported symptoms and objectively assessed disease activity can indeed be instructive for the treating physician to draw an integrative picture of an individual's disease course. This poses a challenge for the design of novel, more comprehensive disease assessments. In this mini-review, we report on the currently available patient-reported outcomes, the unmet needs in the field of chronic inflammatory diseases and the challenges of addressing these.
    MeSH term(s) Chronic Disease ; Comorbidity ; Disease Management ; Disease Susceptibility ; Humans ; Inflammation/diagnosis ; Inflammation/epidemiology ; Inflammation/etiology ; Inflammation/therapy ; Patient Participation ; Patient Reported Outcome Measures ; Physician-Patient Relations ; Practice Patterns, Physicians' ; Precision Medicine ; Public Health Surveillance ; Risk Factors
    Language English
    Publishing date 2021-03-18
    Publishing country Switzerland
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Review
    ZDB-ID 2606827-8
    ISSN 1664-3224 ; 1664-3224
    ISSN (online) 1664-3224
    ISSN 1664-3224
    DOI 10.3389/fimmu.2021.614653
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Longitudinal multi-omics analysis identifies early blood-based predictors of anti-TNF therapy response in inflammatory bowel disease.

    Mishra, Neha / Aden, Konrad / Blase, Johanna I / Baran, Nathan / Bordoni, Dora / Tran, Florian / Conrad, Claudio / Avalos, Diana / Jaeckel, Charlot / Scherer, Michael / Sørensen, Signe B / Overgaard, Silja H / Schulte, Berenice / Nikolaus, Susanna / Rey, Guillaume / Gasparoni, Gilles / Lyons, Paul A / Schultze, Joachim L / Walter, Jörn /
    Andersen, Vibeke / Dermitzakis, Emmanouil T / Schreiber, Stefan / Rosenstiel, Philip

    Genome medicine

    2022  Volume 14, Issue 1, Page(s) 110

    Abstract: Background and aims: Treatment with tumor necrosis factor α (TNFα) antagonists in IBD patients suffers from primary non-response rates of up to 40%. Biomarkers for early prediction of therapy success are missing. We investigated the dynamics of gene ... ...

    Abstract Background and aims: Treatment with tumor necrosis factor α (TNFα) antagonists in IBD patients suffers from primary non-response rates of up to 40%. Biomarkers for early prediction of therapy success are missing. We investigated the dynamics of gene expression and DNA methylation in blood samples of IBD patients treated with the TNF antagonist infliximab and analyzed the predictive potential regarding therapy outcome.
    Methods: We performed a longitudinal, blood-based multi-omics study in two prospective IBD patient cohorts receiving first-time infliximab therapy (discovery: 14 patients, replication: 23 patients). Samples were collected at up to 7 time points (from baseline to 14 weeks after therapy induction). RNA-sequencing and genome-wide DNA methylation data were analyzed and correlated with clinical remission at week 14 as a primary endpoint.
    Results: We found no consistent ex ante predictive signature across the two cohorts. Longitudinally upregulated transcripts in the non-remitter group comprised TH2- and eosinophil-related genes including ALOX15, FCER1A, and OLIG2. Network construction identified transcript modules that were coherently expressed at baseline and in non-remitting patients but were disrupted at early time points in remitting patients. These modules reflected processes such as interferon signaling, erythropoiesis, and platelet aggregation. DNA methylation analysis identified remission-specific temporal changes, which partially overlapped with transcriptomic signals. Machine learning approaches identified features from differentially expressed genes cis-linked to DNA methylation changes at week 2 as a robust predictor of therapy outcome at week 14, which was validated in a publicly available dataset of 20 infliximab-treated CD patients.
    Conclusions: Integrative multi-omics analysis reveals early shifts of gene expression and DNA methylation as predictors for efficient response to anti-TNF treatment. Lack of such signatures might be used to identify patients with IBD unlikely to benefit from TNF antagonists at an early time point.
    MeSH term(s) Biomarkers ; Humans ; Inflammatory Bowel Diseases/drug therapy ; Inflammatory Bowel Diseases/genetics ; Infliximab/therapeutic use ; Interferons/therapeutic use ; Prospective Studies ; RNA ; Tumor Necrosis Factor Inhibitors ; Tumor Necrosis Factor-alpha
    Chemical Substances Biomarkers ; Tumor Necrosis Factor Inhibitors ; Tumor Necrosis Factor-alpha ; RNA (63231-63-0) ; Interferons (9008-11-1) ; Infliximab (B72HH48FLU)
    Language English
    Publishing date 2022-09-24
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2484394-5
    ISSN 1756-994X ; 1756-994X
    ISSN (online) 1756-994X
    ISSN 1756-994X
    DOI 10.1186/s13073-022-01112-z
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: A novel unconventional T cell population enriched in Crohn's disease.

    Rosati, Elisa / Rios Martini, Gabriela / Pogorelyy, Mikhail V / Minervina, Anastasia A / Degenhardt, Frauke / Wendorff, Mareike / Sari, Soner / Mayr, Gabriele / Fazio, Antonella / Dowds, Christel Marie / Hauser, Charlotte / Tran, Florian / von Schönfels, Witigo / Pochhammer, Julius / Salnikova, Maria A / Jaeckel, Charlot / Gigla, Johannes Boy / Sabet, Sanaz Sedghpour / Hübenthal, Matthias /
    Schiminsky, Esther / Schreiber, Stefan / Rosenstiel, Philip C / Scheffold, Alexander / Thomas, Paul G / Lieb, Wolfgang / Bokemeyer, Bernd / Witte, Maria / Aden, Konrad / Hendricks, Alexander / Schafmayer, Clemens / Egberts, Jan-Hendrick / Mamedov, Ilgar Z / Bacher, Petra / Franke, Andre

    Gut

    2022  Volume 71, Issue 11, Page(s) 2194–2204

    Abstract: Objective: One of the current hypotheses to explain the proinflammatory immune response in IBD is a dysregulated T cell reaction to yet unknown intestinal antigens. As such, it may be possible to identify disease-associated T cell clonotypes by ... ...

    Abstract Objective: One of the current hypotheses to explain the proinflammatory immune response in IBD is a dysregulated T cell reaction to yet unknown intestinal antigens. As such, it may be possible to identify disease-associated T cell clonotypes by analysing the peripheral and intestinal T-cell receptor (TCR) repertoire of patients with IBD and controls.
    Design: We performed bulk TCR repertoire profiling of both the TCR alpha and beta chains using high-throughput sequencing in peripheral blood samples of a total of 244 patients with IBD and healthy controls as well as from matched blood and intestinal tissue of 59 patients with IBD and disease controls. We further characterised specific T cell clonotypes via single-cell RNAseq.
    Results: We identified a group of clonotypes, characterised by semi-invariant TCR alpha chains, to be significantly enriched in the blood of patients with Crohn's disease (CD) and particularly expanded in the CD8
    Conclusions: We identified and characterised a subpopulation of unconventional Crohn-associated invariant T (CAIT) cells. Multiple evidence suggests these cells to be part of the NKT type II population. The potential implications of this population for CD or a subset thereof remain to be elucidated, and the immunophenotype and antigen reactivity of CAIT cells need further investigations in future studies.
    MeSH term(s) CD8-Positive T-Lymphocytes ; Crohn Disease/genetics ; Humans ; Natural Killer T-Cells ; Receptors, Antigen, T-Cell/metabolism ; Receptors, Antigen, T-Cell, alpha-beta/genetics
    Chemical Substances Receptors, Antigen, T-Cell ; Receptors, Antigen, T-Cell, alpha-beta
    Language English
    Publishing date 2022-03-09
    Publishing country England
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 80128-8
    ISSN 1468-3288 ; 0017-5749
    ISSN (online) 1468-3288
    ISSN 0017-5749
    DOI 10.1136/gutjnl-2021-325373
    Database MEDical Literature Analysis and Retrieval System OnLINE

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