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  1. Article ; Online: Book Review

    James P. Cooney Ph.D.

    Inquiry: The Journal of Health Care Organization, Provision, and Financing, Vol

    The Mediating Effect of Public Opinion on Public Policy: Exploring the Realm of Health

    2005  Volume 42

    Keywords Public aspects of medicine ; RA1-1270
    Language English
    Publishing date 2005-11-01T00:00:00Z
    Publisher SAGE Publishing
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  2. Article ; Online: Insights Into Drug Repurposing, as Well as Specificity and Compound Properties of Piperidine-Based SARS-CoV-2 PLpro Inhibitors

    Dale J. Calleja / Nathan Kuchel / Bernadine G. C. Lu / Richard W. Birkinshaw / Theresa Klemm / Marcel Doerflinger / James P. Cooney / Liana Mackiewicz / Amanda E. Au / Yu Q. Yap / Timothy R Blackmore / Kasiram Katneni / Elly Crighton / Janet Newman / Kate E. Jarman / Melissa J. Call / Bernhard C. Lechtenberg / Peter E. Czabotar / Marc Pellegrini /
    Susan A. Charman / Kym N. Lowes / Jeffrey P. Mitchell / Ueli Nachbur / Guillaume Lessene / David Komander

    Frontiers in Chemistry, Vol

    2022  Volume 10

    Abstract: The COVID-19 pandemic continues unabated, emphasizing the need for additional antiviral treatment options to prevent hospitalization and death of patients infected with SARS-CoV-2. The papain-like protease (PLpro) domain is part of the SARS-CoV-2 non- ... ...

    Abstract The COVID-19 pandemic continues unabated, emphasizing the need for additional antiviral treatment options to prevent hospitalization and death of patients infected with SARS-CoV-2. The papain-like protease (PLpro) domain is part of the SARS-CoV-2 non-structural protein (nsp)-3, and represents an essential protease and validated drug target for preventing viral replication. PLpro moonlights as a deubiquitinating (DUB) and deISGylating enzyme, enabling adaptation of a DUB high throughput (HTS) screen to identify PLpro inhibitors. Drug repurposing has been a major focus through the COVID-19 pandemic as it may provide a fast and efficient route for identifying clinic-ready, safe-in-human antivirals. We here report our effort to identify PLpro inhibitors by screening the ReFRAME library of 11,804 compounds, showing that none inhibit PLpro with any reasonable activity or specificity to justify further progression towards the clinic. We also report our latest efforts to improve piperidine-scaffold inhibitors, 5c and 3k, originally developed for SARS-CoV PLpro. We report molecular details of binding and selectivity, as well as in vitro absorption, distribution, metabolism and excretion (ADME) studies of this scaffold. A co-crystal structure of SARS-CoV-2 PLpro bound to inhibitor 3k guides medicinal chemistry efforts to improve binding and ADME characteristics. We arrive at compounds with improved and favorable solubility and stability characteristics that are tested for inhibiting viral replication. Whilst still requiring significant improvement, our optimized small molecule inhibitors of PLpro display decent antiviral activity in an in vitro SARS-CoV-2 infection model, justifying further optimization.
    Keywords Nsp3 ; PLpro ; inhibitor ; SARS-CoV-2 ; repurposing ; structure ; Chemistry ; QD1-999
    Subject code 540
    Language English
    Publishing date 2022-04-01T00:00:00Z
    Publisher Frontiers Media S.A.
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  3. Article ; Online: Broad immunity to SARS-CoV-2 variants of concern mediated by a SARS-CoV-2 receptor-binding domain protein vaccineResearch in context

    Georgia Deliyannis / Nicholas A. Gherardin / Chinn Yi Wong / Samantha L. Grimley / James P. Cooney / Samuel J. Redmond / Paula Ellenberg / Kathryn C. Davidson / Francesca L. Mordant / Tim Smith / Marianne Gillard / Ester Lopez / Julie McAuley / Chee Wah Tan / Jing J. Wang / Weiguang Zeng / Mason Littlejohn / Runhong Zhou / Jasper Fuk-Woo Chan /
    Zhi-wei Chen / Airn E. Hartwig / Richard Bowen / Jason M. Mackenzie / Elizabeth Vincan / Joseph Torresi / Katherine Kedzierska / Colin W. Pouton / Tom P. Gordon / Lin-fa Wang / Stephen J. Kent / Adam K. Wheatley / Sharon R. Lewin / Kanta Subbarao / Amy W. Chung / Marc Pellegrini / Trent Munro / Terry Nolan / Steven Rockman / David C. Jackson / Damian F.J. Purcell / Dale I. Godfrey

    EBioMedicine, Vol 92, Iss , Pp 104574- (2023)

    2023  

    Abstract: Summary: Background: The SARS-CoV-2 global pandemic has fuelled the generation of vaccines at an unprecedented pace and scale. However, many challenges remain, including: the emergence of vaccine-resistant mutant viruses, vaccine stability during storage ...

    Abstract Summary: Background: The SARS-CoV-2 global pandemic has fuelled the generation of vaccines at an unprecedented pace and scale. However, many challenges remain, including: the emergence of vaccine-resistant mutant viruses, vaccine stability during storage and transport, waning vaccine-induced immunity, and concerns about infrequent adverse events associated with existing vaccines. Methods: We report on a protein subunit vaccine comprising the receptor-binding domain (RBD) of the ancestral SARS-CoV-2 spike protein, dimerised with an immunoglobulin IgG1 Fc domain. These were tested in conjunction with three different adjuvants: a TLR2 agonist R4-Pam2Cys, an NKT cell agonist glycolipid α-Galactosylceramide, or MF59® squalene oil-in-water adjuvant, using mice, rats and hamsters. We also developed an RBD-human IgG1 Fc vaccine with an RBD sequence of the immuno-evasive beta variant (N501Y, E484K, K417N). These vaccines were also tested as a heterologous third dose booster in mice, following priming with whole spike vaccine. Findings: Each formulation of the RBD-Fc vaccines drove strong neutralising antibody (nAb) responses and provided durable and highly protective immunity against lower and upper airway infection in mouse models of COVID-19. The ‘beta variant’ RBD vaccine, combined with MF59® adjuvant, induced strong protection in mice against the beta strain as well as the ancestral strain. Furthermore, when used as a heterologous third dose booster, the RBD-Fc vaccines combined with MF59® increased titres of nAb against other variants including alpha, delta, delta+, gamma, lambda, mu, and omicron BA.1, BA.2 and BA.5. Interpretation: These results demonstrated that an RBD-Fc protein subunit/MF59® adjuvanted vaccine can induce high levels of broadly reactive nAbs, including when used as a booster following prior immunisation of mice with whole ancestral-strain spike vaccines. This vaccine platform offers a potential approach to augment some of the currently approved vaccines in the face of emerging variants of ...
    Keywords SARS-CoV-2 ; COVID-19 ; Vaccine ; Receptor-binding domain ; RBD ; Medicine ; R ; Medicine (General) ; R5-920
    Subject code 572
    Language English
    Publishing date 2023-06-01T00:00:00Z
    Publisher Elsevier
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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