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  1. AU="Jensen, Kara L"
  2. AU=Wang Yun
  3. AU=Seimiya H
  4. AU="Victor Babos, Diego"
  5. AU="Giuseppe Sergi"
  6. AU="Nackers, Elke"
  7. AU=Grobler Chistine
  8. AU="Norman H. L. Chiu"
  9. AU="Ioannis Politis"
  10. AU="Scott Nugent"
  11. AU="Sepideh MONSEF"
  12. AU="Wang, Zhaoqi"

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  1. Artikel ; Online: Increasing the translation of mouse models of MERS coronavirus pathogenesis through kinetic hematological analysis.

    Leist, Sarah R / Jensen, Kara L / Baric, Ralph S / Sheahan, Timothy P

    PloS one

    2019  Band 14, Heft 7, Seite(n) e0220126

    Abstract: Newly emerging viral pathogens pose a constant and unpredictable threat to human and animal health. Coronaviruses (CoVs) have a penchant for sudden emergence, as evidenced by severe acute respiratory syndrome coronavirus (SARS-CoV), Middle East ... ...

    Abstract Newly emerging viral pathogens pose a constant and unpredictable threat to human and animal health. Coronaviruses (CoVs) have a penchant for sudden emergence, as evidenced by severe acute respiratory syndrome coronavirus (SARS-CoV), Middle East respiratory syndrome CoV (MERS-CoV) and most recently, swine acute diarrhea syndrome coronavirus (SADS-CoV). Small animal models of emerging viral pathogenesis are crucial to better understand the virus and host factors driving disease progression. However, rodent models are often criticized for their limited translatability to humans. The complete blood count is the most ordered clinical test in the United States serving as the cornerstone of clinical medicine and differential diagnosis. We recently generated a mouse model for MERS-CoV pathogenesis through the humanization of the orthologous entry receptor dipeptidyl peptidase 4 (DPP4). To increase the translatability of this model, we validated and established the use of an automated veterinary hematology analyzer (VetScan HM5) at biosafety level 3 for analysis of peripheral blood. MERS-CoV lung titer peaked 2 days post infection concurrent with lymphopenia and neutrophilia in peripheral blood, two phenomena also observed in MERS-CoV infection of humans. The fluctuations in leukocyte populations measured by Vetscan HM5 were corroborated by standard flow cytometry, thus confirming the utility of this approach. Comparing a sublethal and lethal dose of MERS-CoV in mice, analysis of daily blood draws demonstrates a dose dependent modulation of leukocytes. Major leukocyte populations were modulated before weight loss was observed. Importantly, neutrophil counts on 1dpi were predictive of disease severity with a lethal dose of MERS-CoV highlighting the predictive value of hematology in this model. Taken together, the inclusion of hematological measures in mouse models of emerging viral pathogenesis increases their translatability and should elevate the preclinical evaluation of MERS-CoV therapeutics and vaccines to better mirror the complexity of the human condition.
    Mesh-Begriff(e) Animals ; Biological Monitoring/methods ; Blood Chemical Analysis/veterinary ; Chlorocebus aethiops ; Coronavirus Infections/blood ; Coronavirus Infections/pathology ; Coronavirus Infections/veterinary ; Coronavirus Infections/virology ; Disease Models, Animal ; Disease Progression ; Female ; Hematologic Tests/veterinary ; Humans ; Kinetics ; Mice ; Mice, Inbred C57BL ; Middle East Respiratory Syndrome Coronavirus/isolation & purification ; Middle East Respiratory Syndrome Coronavirus/pathogenicity ; Vero Cells
    Schlagwörter covid19
    Sprache Englisch
    Erscheinungsdatum 2019-07-24
    Erscheinungsland United States
    Dokumenttyp Journal Article ; Research Support, N.I.H., Extramural
    ISSN 1932-6203
    ISSN (online) 1932-6203
    DOI 10.1371/journal.pone.0220126
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  2. Artikel ; Online: Genetic loci regulate Sarbecovirus pathogenesis: A comparison across mice and humans.

    Schäfer, Alexandra / Gralinski, Lisa E / Leist, Sarah R / Hampton, Brea K / Mooney, Michael A / Jensen, Kara L / Graham, Rachel L / Agnihothram, Sudhakar / Jeng, Sophia / Chamberlin, Steven / Bell, Timothy A / Scobey, D Trevor / Linnertz, Colton L / VanBlargan, Laura A / Thackray, Larissa B / Hock, Pablo / Miller, Darla R / Shaw, Ginger D / Diamond, Michael S /
    de Villena, Fernando Pardo Manuel / McWeeney, Shannon K / Heise, Mark T / Menachery, Vineet D / Ferris, Martin T / Baric, Ralph S

    Virus research

    2024  Band 344, Seite(n) 199357

    Abstract: Coronavirus (CoV) cause considerable morbidity and mortality in humans and other mammals, as evidenced by the emergence of Severe Acute Respiratory CoV (SARS-CoV) in 2003, Middle East Respiratory CoV (MERS-CoV) in 2012, and SARS-CoV-2 in 2019. Although ... ...

    Abstract Coronavirus (CoV) cause considerable morbidity and mortality in humans and other mammals, as evidenced by the emergence of Severe Acute Respiratory CoV (SARS-CoV) in 2003, Middle East Respiratory CoV (MERS-CoV) in 2012, and SARS-CoV-2 in 2019. Although poorly characterized, natural genetic variation in human and other mammals modulate virus pathogenesis, as reflected by the spectrum of clinical outcomes ranging from asymptomatic infections to lethal disease. Using multiple human epidemic and zoonotic Sarbecoviruses, coupled with murine Collaborative Cross genetic reference populations, we identify several dozen quantitative trait loci that regulate SARS-like group-2B CoV pathogenesis and replication. Under a Chr4 QTL, we deleted a candidate interferon stimulated gene, Trim14 which resulted in enhanced SARS-CoV titers and clinical disease, suggesting an antiviral role during infection. Importantly, about 60 % of the murine QTL encode susceptibility genes identified as priority candidates from human genome-wide association studies (GWAS) studies after SARS-CoV-2 infection, suggesting that similar selective forces have targeted analogous genes and pathways to regulate Sarbecovirus disease across diverse mammalian hosts. These studies provide an experimental platform in rodents to investigate the molecular-genetic mechanisms by which potential cross mammalian susceptibility loci and genes regulate type-specific and cross-SARS-like group 2B CoV replication, immunity, and pathogenesis in rodent models. Our study also provides a paradigm for identifying susceptibility loci for other highly heterogeneous and virulent viruses that sporadically emerge from zoonotic reservoirs to plague human and animal populations.
    Mesh-Begriff(e) Animals ; Humans ; Mice ; Quantitative Trait Loci ; SARS-CoV-2/genetics ; Virus Replication ; Genome-Wide Association Study ; COVID-19/virology ; Tripartite Motif Proteins/genetics ; Coronavirus Infections/virology ; Coronavirus Infections/genetics ; Disease Models, Animal
    Chemische Substanzen Tripartite Motif Proteins
    Sprache Englisch
    Erscheinungsdatum 2024-03-23
    Erscheinungsland Netherlands
    Dokumenttyp Journal Article ; Research Support, N.I.H., Extramural ; Research Support, Non-U.S. Gov't ; Comparative Study
    ZDB-ID 605780-9
    ISSN 1872-7492 ; 0168-1702
    ISSN (online) 1872-7492
    ISSN 0168-1702
    DOI 10.1016/j.virusres.2024.199357
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  3. Artikel ; Online: Permissivity of Dipeptidyl Peptidase 4 Orthologs to Middle East Respiratory Syndrome Coronavirus Is Governed by Glycosylation and Other Complex Determinants.

    Peck, Kayla M / Scobey, Trevor / Swanstrom, Jesica / Jensen, Kara L / Burch, Christina L / Baric, Ralph S / Heise, Mark T

    Journal of virology

    2017  Band 91, Heft 19

    Abstract: Middle East respiratory syndrome coronavirus (MERS-CoV) utilizes dipeptidyl peptidase 4 (DPP4) as an entry receptor. While bat, camel, and human DPP4 support MERS-CoV infection, several DPP4 orthologs, including mouse, ferret, hamster, and guinea pig ... ...

    Abstract Middle East respiratory syndrome coronavirus (MERS-CoV) utilizes dipeptidyl peptidase 4 (DPP4) as an entry receptor. While bat, camel, and human DPP4 support MERS-CoV infection, several DPP4 orthologs, including mouse, ferret, hamster, and guinea pig DPP4, do not. Previous work revealed that glycosylation of mouse DPP4 plays a role in blocking MERS-CoV infection. Here, we tested whether glycosylation also acts as a determinant of permissivity for ferret, hamster, and guinea pig DPP4. We found that, while glycosylation plays an important role in these orthologs, additional sequence and structural determinants impact their ability to act as functional receptors for MERS-CoV. These results provide insight into DPP4 species-specific differences impacting MERS-CoV host range and better inform our understanding of virus-receptor interactions associated with disease emergence and host susceptibility.
    Mesh-Begriff(e) Amino Acid Sequence/genetics ; Animals ; Cell Line ; Cercopithecus aethiops ; Coronavirus Infections/genetics ; Coronavirus Infections/pathology ; Coronavirus Infections/virology ; Cricetinae ; Dipeptidyl Peptidase 4/genetics ; Dipeptidyl Peptidase 4/metabolism ; Ferrets ; Glycosylation ; Guinea Pigs ; HEK293 Cells ; Host Specificity/physiology ; Humans ; Middle East Respiratory Syndrome Coronavirus/metabolism ; Receptors, Virus/genetics ; Receptors, Virus/metabolism ; Sequence Alignment ; Sequence Homology, Amino Acid ; Vero Cells ; Virus Attachment
    Chemische Substanzen Receptors, Virus ; Dipeptidyl Peptidase 4 (EC 3.4.14.5)
    Schlagwörter covid19
    Sprache Englisch
    Erscheinungsdatum 2017-09-12
    Erscheinungsland United States
    Dokumenttyp Journal Article ; Research Support, U.S. Gov't, Non-P.H.S. ; Research Support, N.I.H., Extramural
    ZDB-ID 80174-4
    ISSN 1098-5514 ; 0022-538X
    ISSN (online) 1098-5514
    ISSN 0022-538X
    DOI 10.1128/JVI.00534-17
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  4. Artikel: Common Mechanism of SARS-CoV and SARS-CoV-2 Pathogenesis across Species.

    Schäfer, Alexandra / Gralinski, Lisa E / Leist, Sarah R / Winkler, Emma S / Hampton, Brea K / Mooney, Michael A / Jensen, Kara L / Graham, Rachel L / Agnihothram, Sudhakar / Jeng, Sophia / Chamberlin, Steven / Bell, Timothy A / Scobey, D Trevor / VanBlargan, Laura A / Thackray, Larissa B / Hock, Pablo / Miller, Darla R / Shaw, Ginger D / de Villena, Fernando Pardo Manuel /
    McWeeney, Shannon K / Montgomery, Stephanie A / Diamond, Michael S / Heise, Mark T / Menachery, Vineet D / Ferris, Martin T / Baric, Ralph S

    bioRxiv : the preprint server for biology

    2021  

    Abstract: Sarbecovirus (CoV) infections, including Severe Acute Respiratory CoV (SARS-CoV) and SARS-CoV-2, are considerable human threats. Human GWAS studies have recently identified loci associated with variation in SARS-CoV-2 susceptibility. However, genetically ...

    Abstract Sarbecovirus (CoV) infections, including Severe Acute Respiratory CoV (SARS-CoV) and SARS-CoV-2, are considerable human threats. Human GWAS studies have recently identified loci associated with variation in SARS-CoV-2 susceptibility. However, genetically tractable models that reproduce human CoV disease outcomes are needed to mechanistically evaluate genetic determinants of CoV susceptibility. We used the Collaborative Cross (CC) and human GWAS datasets to elucidate host susceptibility loci that regulate CoV infections and to identify host quantitative trait loci that modulate severe CoV and pan-CoV disease outcomes including a major disease regulating loci including
    Sprache Englisch
    Erscheinungsdatum 2021-05-14
    Erscheinungsland United States
    Dokumenttyp Preprint
    DOI 10.1101/2021.05.14.444205
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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  5. Artikel ; Online: Common Mechanism of SARS-CoV and SARS-CoV-2 Pathogenesis across Species

    Schafer, Alexandra / Gralinski, Lisa E. / Leist, Sarah R. / Winkler, Emma S. / Hampton, Brea K. / Mooney, Michael A. / Jensen, Kara L. / Graham, Rachel L. / Agnihothram, Sudhakar / Jeng, Sophia / Chamberlin, Steven / Bell, Timothy A. / Scobey, D. Trevor / VanBlargan, Laura A. / Thackray, Larissa B. / Hock, Pablo / Miller, Darla R. / Shaw, Ginger D. / Pardo Manuel de Villena, Fernando /
    McWeeney, Shannon K. / Montgomery, Stephanie A. / Diamond, Michael S. / Heise, Mark T. / Menachery, Vineet D. / Ferris, Martin T. / Baric, Ralph S.

    bioRxiv

    Abstract: Sarbecovirus (CoV) infections, including Severe Acute Respiratory CoV (SARS-CoV) and SARS-CoV-2, are considerable human threats. Human GWAS studies have recently identified loci associated with variation in SARS-CoV-2 susceptibility. However, genetically ...

    Abstract Sarbecovirus (CoV) infections, including Severe Acute Respiratory CoV (SARS-CoV) and SARS-CoV-2, are considerable human threats. Human GWAS studies have recently identified loci associated with variation in SARS-CoV-2 susceptibility. However, genetically tractable models that reproduce human CoV disease outcomes are needed to mechanistically evaluate genetic determinants of CoV susceptibility. We used the Collaborative Cross (CC) and human GWAS datasets to elucidate host susceptibility loci that regulate CoV infections and to identify host quantitative trait loci that modulate severe CoV and pan-CoV disease outcomes including a major disease regulating loci including CCR9. CCR9 ablation resulted in enhanced titer, weight loss, respiratory dysfunction, mortality, and inflammation, providing mechanistic support in mitigating protection from severe SARS-CoV-2 pathogenesis across species. This study represents a comprehensive analysis of susceptibility loci for an entire genus of human pathogens conducted, identifies a large collection of susceptibility loci and candidate genes that regulate multiple aspects type-specific and cross-CoV pathogenesis, and also validates the paradigm of using the CC platform to identify common cross-species susceptibility loci and genes for newly emerging and pre-epidemic viruses.
    Schlagwörter covid19
    Sprache Englisch
    Erscheinungsdatum 2021-05-14
    Verlag Cold Spring Harbor Laboratory
    Dokumenttyp Artikel ; Online
    DOI 10.1101/2021.05.14.444205
    Datenquelle COVID19

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  6. Artikel: Functional gene analysis of individual response to challenge of SIVmac239 in M. mulatta PBMC culture.

    Thomas, Matthew J / Agy, Michael B / Proll, Sean C / Paeper, Bryan W / Li, Yu / Jensen, Kara L / Korth, Marcus J / Katze, Michael G

    Virology

    2006  Band 348, Heft 1, Seite(n) 242–252

    Abstract: It has previously been shown in macaques that individual animals exhibit varying responses to challenge with the same strain of SIV. We attempted to elucidate these differences using functional genomics and correlate them to biological response. ... ...

    Abstract It has previously been shown in macaques that individual animals exhibit varying responses to challenge with the same strain of SIV. We attempted to elucidate these differences using functional genomics and correlate them to biological response. Unfractionated PBMC from three rhesus macaques were isolated, activated, and infected with SIVmac239. Interestingly, one of the three animals used for these experiments exhibited a completely unique response to infection relative to the other two. After repeated attempts to infect the PBMC from this animal, little or no infectivity was seen across the time points considered, and corresponding to this apparent lack of infection, few genes were seen to be differentially expressed when compared to mock-infected cells. For the remaining two animals, gene expression analysis showed that while they exhibited responses for the same groups of pathways, these responses included differences specific to the individual animal at the gene level. In instances where the patterns of differential gene expression differed between these animals, the genes being differentially expressed were associated with the same categories of biological process, mainly immune response and cell signaling. At the pathway level, these animals again exhibited similar responses that could be predicted based on the experimental conditions. Even in these expected results, the degree of response and the specific genes being regulated differed greatly from animal to animal. The differences in gene expression on an individual level have the potential to be used as markers in identification of animals suitable for lentiviral infection experiments. Our results highlight the importance of individual variation in response to viral challenge.
    Mesh-Begriff(e) Animals ; Flow Cytometry ; Gene Expression ; Gene Expression Profiling ; Immunity/genetics ; Leukocytes, Mononuclear/physiology ; Leukocytes, Mononuclear/virology ; Lymphocyte Subsets ; Macaca mulatta ; Oligonucleotide Array Sequence Analysis ; RNA, Messenger/analysis ; Reverse Transcriptase Polymerase Chain Reaction ; Simian Immunodeficiency Virus/physiology ; Transcription, Genetic
    Chemische Substanzen RNA, Messenger
    Sprache Englisch
    Erscheinungsdatum 2006-04-25
    Erscheinungsland United States
    Dokumenttyp Comparative Study ; Journal Article ; Research Support, N.I.H., Extramural
    ZDB-ID 200425-2
    ISSN 1096-0341 ; 0042-6822
    ISSN (online) 1096-0341
    ISSN 0042-6822
    DOI 10.1016/j.virol.2005.12.015
    Datenquelle MEDical Literature Analysis and Retrieval System OnLINE

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