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Book: Diversity and ecology of lichens in polar and mountain ecosystems

Hafellner, J / Kärnefelt, Ingvar / Wirth, Volkmar

(Bibliotheca lichenologica, ; v. 104)

2010

Author's details	editors: Josef Hafellner, Ingvar Kärnefelt, Volkmar Wirth
Series title	Bibliotheca lichenologica, ; v. 104
Keywords	Lichens/Ecology ; Mountain biodiversity.
Language	English
Size	389 p. :, ill., maps ;, 23 cm.
Publisher	Cramer in der Gebrüder Borntraeger Verlagsbuchhandlung
Publishing place	Stuttgart
Document type	Book
ISBN	9783443580834 ; 3443580831
Database	NAL-Catalogue (AGRICOLA)

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Book: Systematics, biodiversity and ecology of lichens

Kärnefelt, Ingvar / Seaward, M. R. D / Thell, Arne

(Bibliotheca lichenologica, ; v. 108)

2012

Author's details	editors, Ingvar Kärnefelt, Mark R. D. Seaward & Arne Thell
Series title	Bibliotheca lichenologica, ; v. 108
Keywords	Lichens. ; Lichens/Ecology.
Language	English
Size	ix, 290 p. :, ill. (some col.) ;, 23 cm.
Publisher	Cramer in der Gebr. Borntraeger Verlagsbuchhandlung
Publishing place	Stuttgart
Document type	Book
Note	Festschrift.
ISBN	9783443580872 ; 3443580874
Database	NAL-Catalogue (AGRICOLA)

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Book: Lichenological contributions in honour of David Galloway

Kärnefelt, Ingvar / Thell, Arne / Galloway, David J

(Bibliotheca lichenologica, ; Bd. 95)

2007

Author's details	editors: Ingvar Kärnefelt, Arne Thell
Series title	Bibliotheca lichenologica, ; Bd. 95
Keywords	Lichens. ; Lichenology.
Language	English
Size	xiii, 603 p. :, ill., maps ;, 23 cm.
Publisher	Cramer in der Gebrüder Borntraeger Verlagsbuchhandlung
Publishing place	Stuttgart
Document type	Book
ISBN	9783443580742 ; 3443580742
Database	NAL-Catalogue (AGRICOLA)

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Article: Phylogenetic studies in the Candelariaceae (lichenized Ascomycota) based on nuclear ITS DNA sequence data.

Westberg, Martin / Arup, Ulf / Kärnefelt, Ingvar

Mycological research

2007 Volume 111, Issue Pt 11, Page(s) 1277–1284

Abstract: The phylogeny of the lichen family Candelariaceae was investigated using nucleotide sequences from the ITS region of the nu-rDNA. Twenty-three species of Candelariella, six species of Candelaria, two species of Candelina and two species of Placomaronea ... ...

Abstract	The phylogeny of the lichen family Candelariaceae was investigated using nucleotide sequences from the ITS region of the nu-rDNA. Twenty-three species of Candelariella, six species of Candelaria, two species of Candelina and two species of Placomaronea were included in the study. Acarospora cervina and Pleopsidium chlorophanum were used as outgroup species. The phylogenetic analyses were performed using MP and Bayesian MCMC inference. The resulting trees were poorly resolved and strong support was only found for terminal clades. However, the results indicate that polyspored asci have evolved a limited number of times within the family and appear within four clades. One of these clades comprises the core group of Candelariella, including the type species C. vitellina. Placomaronea and Candelina both form strongly supported monophyletic clades, but neither genera are distinctly morphologically separated from Candelariella, and their positions in the tree are uncertain. The genus Candelaria is probably polyphyletic and should possibly be restricted to comprise only polyspored species with a lower cortex.
MeSH term(s)	Ascomycota/genetics ; DNA, Fungal/analysis ; DNA, Fungal/isolation & purification ; DNA, Ribosomal Spacer/analysis ; Lichens/microbiology ; Molecular Sequence Data ; Phylogeny ; Sequence Alignment ; Sequence Analysis, DNA ; Species Specificity
Chemical Substances	DNA, Fungal ; DNA, Ribosomal Spacer
Language	English
Publishing date	2007-11
Publishing country	England
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	1478365-4
ISSN	1469-8102 ; 0953-7562
ISSN (online)	1469-8102
ISSN	0953-7562
DOI	10.1016/j.mycres.2007.08.007
Database	MEDical Literature Analysis and Retrieval System OnLINE

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Article: A review of the lichen family Parmeliaceae – history, phylogeny and current taxonomy

Thell, Arne / Crespo, Ana / Divakar, Pradeep K / Kärnefelt, Ingvar / Leavitt, Steven D / Lumbsch, H. Thorsten / Seaward, Mark R. D

Nordic journal of botany. 2012 Dec., v. 30, no. 6

2012

Abstract: The largest family of lichen‐forming fungi, the Parmeliaceae, is reviewed. It includes 79 genera in current use and ca 2726 species, a large majority of which belong to one of five main clades: the parmelioid, cetrarioid, usneoid, alectorioid and ... ...

Abstract	The largest family of lichen‐forming fungi, the Parmeliaceae, is reviewed. It includes 79 genera in current use and ca 2726 species, a large majority of which belong to one of five main clades: the parmelioid, cetrarioid, usneoid, alectorioid and hypogymnioid. However, 21 genera are positioned outside these clades, and four genera in current use still lack DNA‐ data. The family has been shown to be monophyletic and the generic classification is relatively well‐settled compared with other lecanoralean families. Each clade and its genera are presented here with the latest results from phylogenetic analyses and current taxonomy. In addition, a historical outline of the family and its most prominent researchers is provided.
Keywords	Parmeliaceae ; fungi ; lichens ; phylogeny ; taxonomy
Language	English
Dates of publication	2012-12
Size	p. 641-664.
Publishing place	Blackwell Publishing Ltd
Document type	Article
ZDB-ID	2406507-9
ISSN	1756-1051 ; 0107-055X
ISSN (online)	1756-1051
ISSN	0107-055X
DOI	10.1111/j.1756-1051.2012.00008.x
Database	NAL-Catalogue (AGRICOLA)

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Book: The brown fruticose species of Cetraria

Kärnefelt, Ingvar

(Opera botanica ; 46.)

1979

Author's details	Ingvar Kärnefelt. --
Series title	Opera botanica ; 46.
Language	English
Size	150 p. :, ill., maps ;, 24 cm. --
Publisher	Berlings
Publishing place	Lund
Document type	Book
Note	Includes index.
ISBN	9154602548 ; 9789154602544
Database	NAL-Catalogue (AGRICOLA)

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Book ; Thesis: The brown fruticose species of Cetraria

Kärnefelt, Ingvar

(Opera botanica ; 46)

1979

Author's details	Ingvar Kärnefelt
Series title	Opera botanica ; 46
Language	Undetermined
Size	150 S, Ill., Kt
Publisher	NFR
Publishing place	Stockholm
Document type	Book ; Thesis
Thesis / German Habilitation thesis	Lund, Univ., Diss. : 1979
ISBN	9154602548 ; 9789154602544
Database	Former special subject collection: coastal and deep sea fishing

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Journal: Large-Scale Differentiation and Dynamics in Tundra Plant Populations and Vegetation

Jonsdottir, Ingibjoerg S. / Virtanen, Risto / Kaernefelt, Ingvar

Ambio : A Journal of the Human Environment

1999 Volume 28, Page(s) 230–238

Abstract: The inclusion of the botanical projects in the Swedish-Russian Tundra Ecology-94 expedition provided new information on the ecology of tundra plants. The vegetation patterns on different scales were documented, and interpreted as the result of a complex ... ...

Abstract	The inclusion of the botanical projects in the Swedish-Russian Tundra Ecology-94 expedition provided new information on the ecology of tundra plants. The vegetation patterns on different scales were documented, and interpreted as the result of a complex interaction with environmental factors. The distribution of fruticose lichens was studied, and it was shown that these lichens rely on different modes of asexual reproduction for their dispersal. Extreme old genet ages were demonstrated for species of Carex and there were similar strong indications for lichens. Populations of Carex were genetically diverse in spite of old ages and often low levels of flowering. Large differences between sites in flowering and vegetative ramet production (vegetative reproduction) in Carex reflected an asynchronous between-year population fluctuation, which was related to cyclic lemming populations and climate. Important gaps in our knowledge of the ecology of tundra plants are pointed out, some of which will hopefully be resolved during the tundra expedition, Tundra Northwest 1999.
Keywords	Populationsdynamik ; Pflanze ; Tundra ; Vegetation ; Botanik ; Oekologischer Faktor ; Flechte ; Fortpflanzung ; Klimafaktor ; Polargebiet ; Pflanzenoekologie ; Pflanzengesellschaft ; Datensammlung ; Klon ; Evolution ; Genetische Variation ; Diversitaet ; Arktisches Oekosystem ; Pflanzenart ; Weidenbaum ; Regionale Verteilung ; Regionale Differenzierung ; Temperaturmessung ; Datensammlung ; Ausbreitungsvorgang ; Biologische Anpassung
Language	English
Document type	Journal
Database	OPAC and Environmental database (ULIDAT) of The Federal Environment Agency (UBA)

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Article: Considerations and consequences of allowing DNA sequence data as types of fungal taxa.

Zamora, Juan Carlos / Svensson, Måns / Kirschner, Roland / Olariaga, Ibai / Ryman, Svengunnar / Parra, Luis Alberto / Geml, József / Rosling, Anna / Adamčík, Slavomír / Ahti, Teuvo / Aime, M Catherine / Ainsworth, A Martyn / Albert, László / Albertó, Edgardo / García, Alberto Altés / Ageev, Dmitry / Agerer, Reinhard / Aguirre-Hudson, Begoña / Ammirati, Joe /

Andersson, Harry / Angelini, Claudio / Antonín, Vladimír / Aoki, Takayuki / Aptroot, André / Argaud, Didier / Sosa, Blanca Imelda Arguello / Aronsen, Arne / Arup, Ulf / Asgari, Bita / Assyov, Boris / Atienza, Violeta / Bandini, Ditte / Baptista-Ferreira, João Luís / Baral, Hans-Otto / Baroni, Tim / Barreto, Robert Weingart / Beker, Henry / Bell, Ann / Bellanger, Jean-Michel / Bellù, Francesco / Bemmann, Martin / Bendiksby, Mika / Bendiksen, Egil / Bendiksen, Katriina / Benedek, Lajos / Bérešová-Guttová, Anna / Berger, Franz / Berndt, Reinhard / Bernicchia, Annarosa / Biketova, Alona Yu / Bizio, Enrico / Bjork, Curtis / Boekhout, Teun / Boertmann, David / Böhning, Tanja / Boittin, Florent / Boluda, Carlos G / Boomsluiter, Menno W / Borovička, Jan / Brandrud, Tor Erik / Braun, Uwe / Brodo, Irwin / Bulyonkova, Tatiana / Burdsall, Harold H / Buyck, Bart / Burgaz, Ana Rosa / Calatayud, Vicent / Callac, Philippe / Campo, Emanuele / Candusso, Massimo / Capoen, Brigitte / Carbó, Joaquim / Carbone, Matteo / Castañeda-Ruiz, Rafael F / Castellano, Michael A / Chen, Jie / Clerc, Philippe / Consiglio, Giovanni / Corriol, Gilles / Courtecuisse, Régis / Crespo, Ana / Cripps, Cathy / Crous, Pedro W / da Silva, Gladstone Alves / da Silva, Meiriele / Dam, Marjo / Dam, Nico / Dämmrich, Frank / Das, Kanad / Davies, Linda / De Crop, Eske / De Kesel, Andre / De Lange, Ruben / De Madrignac Bonzi, Bárbara / Dela Cruz, Thomas Edison E / Delgat, Lynn / Demoulin, Vincent / Desjardin, Dennis E / Diederich, Paul / Dima, Bálint / Dios, Maria Martha / Divakar, Pradeep Kumar / Douanla-Meli, Clovis / Douglas, Brian / Drechsler-Santos, Elisandro Ricardo / Dyer, Paul S / Eberhardt, Ursula / Ertz, Damien / Esteve-Raventós, Fernando / Salazar, Javier Angel Etayo / Evenson, Vera / Eyssartier, Guillaume / Farkas, Edit / Favre, Alain / Fedosova, Anna G / Filippa, Mario / Finy, Péter / Flakus, Adam / Fos, Simón / Fournier, Jacques / Fraiture, André / Franchi, Paolo / Molano, Ana Esperanza Franco / Friebes, Gernot / Frisch, Andreas / Fryday, Alan / Furci, Giuliana / Márquez, Ricardo Galán / Garbelotto, Matteo / García-Martín, Joaquina María / Otálora, Mónica A García / Sánchez, Dania García / Gardiennet, Alain / Garnica, Sigisfredo / Benavent, Isaac Garrido / Gates, Genevieve / da Cruz Lima Gerlach, Alice / Ghobad-Nejhad, Masoomeh / Gibertoni, Tatiana B / Grebenc, Tine / Greilhuber, Irmgard / Grishkan, Bella / Groenewald, Johannes Z / Grube, Martin / Gruhn, Gérald / Gueidan, Cécile / Gulden, Gro / Gusmão, Luis Fp / Hafellner, Josef / Hairaud, Michel / Halama, Marek / Hallenberg, Nils / Halling, Roy E / Hansen, Karen / Harder, Christoffer Bugge / Heilmann-Clausen, Jacob / Helleman, Stip / Henriot, Alain / Hernandez-Restrepo, Margarita / Herve, Raphaël / Hobart, Caroline / Hoffmeister, Mascha / Høiland, Klaus / Holec, Jan / Holien, Håkon / Hughes, Karen / Hubka, Vit / Huhtinen, Seppo / Ivančević, Boris / Jagers, Marian / Jaklitsch, Walter / Jansen, AnnaElise / Jayawardena, Ruvishika S / Jeppesen, Thomas Stjernegaard / Jeppson, Mikael / Johnston, Peter / Jørgensen, Per Magnus / Kärnefelt, Ingvar / Kalinina, Liudmila B / Kantvilas, Gintaras / Karadelev, Mitko / Kasuya, Taiga / Kautmanová, Ivona / Kerrigan, Richard W / Kirchmair, Martin / Kiyashko, Anna / Knapp, Dániel G / Knudsen, Henning / Knudsen, Kerry / Knutsson, Tommy / Kolařík, Miroslav / Kõljalg, Urmas / Košuthová, Alica / Koszka, Attila / Kotiranta, Heikki / Kotkova, Vera / Koukol, Ondřej / Kout, Jiří / Kovács, Gábor M / Kříž, Martin / Kruys, Åsa / Kučera, Viktor / Kudzma, Linas / Kuhar, Francisco / Kukwa, Martin / Arun Kumar, T K / Kunca, Vladimír / Kušan, Ivana / Kuyper, Thomas W / Lado, Carlos / Læssøe, Thomas / Lainé, Patrice / Langer, Ewald / Larsson, Ellen / Larsson, Karl-Henrik / Laursen, Gary / Lechat, Christian / Lee, Serena / Lendemer, James C / Levin, Laura / Lindemann, Uwe / Lindström, Håkan / Liu, Xingzhong / Hernandez, Regulo Carlos Llarena / Llop, Esteve / Locsmándi, Csaba / Lodge, Deborah Jean / Loizides, Michael / Lőkös, László / Luangsa-Ard, Jennifer / Lüderitz, Matthias / Lumbsch, Thorsten / Lutz, Matthias / Mahoney, Dan / Malysheva, Ekaterina / Malysheva, Vera / Manimohan, Patinjareveettil / Marin-Felix, Yasmina / Marques, Guilhermina / Martínez-Gil, Rubén / Marson, Guy / Mata, Gerardo / Matheny, P Brandon / Mathiassen, Geir Harald / Matočec, Neven / Mayrhofer, Helmut / Mehrabi, Mehdi / Melo, Ireneia / Mešić, Armin / Methven, Andrew S / Miettinen, Otto / Romero, Ana M Millanes / Miller, Andrew N / Mitchell, James K / Moberg, Roland / Moreau, Pierre-Arthur / Moreno, Gabriel / Morozova, Olga / Morte, Asunción / Muggia, Lucia / González, Guillermo Muñoz / Myllys, Leena / Nagy, István / Nagy, László G / Neves, Maria Alice / Niemelä, Tuomo / Nimis, Pier Luigi / Niveiro, Nicolas / Noordeloos, Machiel E / Nordin, Anders / Noumeur, Sara Raouia / Novozhilov, Yuri / Nuytinck, Jorinde / Ohenoja, Esteri / Fiuza, Patricia Oliveira / Orange, Alan / Ordynets, Alexander / Ortiz-Santana, Beatriz / Pacheco, Leticia / Pál-Fám, Ferenc / Palacio, Melissa / Palice, Zdeněk / Papp, Viktor / Pärtel, Kadri / Pawlowska, Julia / Paz, Aurelia / Peintner, Ursula / Pennycook, Shaun / Pereira, Olinto Liparini / Daniëls, Pablo Pérez / Pérez-De-Gregorio Capella, Miquel À / Del Amo, Carlos Manuel Pérez / Gorjón, Sergio Pérez / Pérez-Ortega, Sergio / Pérez-Vargas, Israel / Perry, Brian A / Petersen, Jens H / Petersen, Ronald H / Pfister, Donald H / Phukhamsakda, Chayanard / Piątek, Marcin / Piepenbring, Meike / Pino-Bodas, Raquel / Esquivel, Juan Pablo Pinzón / Pirot, Paul / Popov, Eugene S / Popoff, Orlando / Álvaro, María Prieto / Printzen, Christian / Psurtseva, Nadezhda / Purahong, Witoon / Quijada, Luis / Rambold, Gerhard / Ramírez, Natalia A / Raja, Huzefa / Raspé, Olivier / Raymundo, Tania / Réblová, Martina / Rebriev, Yury A / de Dios Reyes García, Juan / Ripoll, Miguel Ángel Ribes / Richard, Franck / Richardson, Mike J / Rico, Víctor J / Robledo, Gerardo Lucio / Barbosa, Flavia Rodrigues / Rodriguez-Caycedo, Cristina / Rodriguez-Flakus, Pamela / Ronikier, Anna / Casas, Luis Rubio / Rusevska, Katerina / Saar, Günter / Saar, Irja / Salcedo, Isabel / Martínez, Sergio M Salcedo / Montoya, Carlos A Salvador / Sánchez-Ramírez, Santiago / Sandoval-Sierra, J Vladimir / Santamaria, Sergi / Monteiro, Josiane Santana / Schroers, Hans Josef / Schulz, Barbara / Schmidt-Stohn, Geert / Schumacher, Trond / Senn-Irlet, Beatrice / Ševčíková, Hana / Shchepin, Oleg / Shirouzu, Takashi / Shiryaev, Anton / Siepe, Klaus / Sir, Esteban B / Sohrabi, Mohammad / Soop, Karl / Spirin, Viacheslav / Spribille, Toby / Stadler, Marc / Stalpers, Joost / Stenroos, Soili / Suija, Ave / Sunhede, Stellan / Svantesson, Sten / Svensson, Sigvard / Svetasheva, Tatyana Yu / Świerkosz, Krzysztof / Tamm, Heidi / Taskin, Hatira / Taudière, Adrien / Tedebrand, Jan-Olof / Lahoz, Raúl Tena / Temina, Marina / Thell, Arne / Thines, Marco / Thor, Göran / Thüs, Holger / Tibell, Leif / Tibell, Sanja / Timdal, Einar / Tkalčec, Zdenko / Tønsberg, Tor / Trichies, Gérard / Triebel, Dagmar / Tsurykau, Andrei / Tulloss, Rodham E / Tuovinen, Veera / Sosa, Miguel Ulloa / Urcelay, Carlos / Valade, François / Garza, Ricardo Valenzuela / van den Boom, Pieter / Van Vooren, Nicolas / Vasco-Palacios, Aida M / Vauras, Jukka / Velasco Santos, Juan Manuel / Vellinga, Else / Verbeken, Annemieke / Vetlesen, Per / Vizzini, Alfredo / Voglmayr, Hermann / Volobuev, Sergey / von Brackel, Wolfgang / Voronina, Elena / Walther, Grit / Watling, Roy / Weber, Evi / Wedin, Mats / Weholt, Øyvind / Westberg, Martin / Yurchenko, Eugene / Zehnálek, Petr / Zhang, Huang / Zhurbenko, Mikhail P / Ekman, Stefan

IMA fungus

2018 Volume 9, Issue 1, Page(s) 167–175

Abstract: Nomenclatural type definitions are one of the most important concepts in biological nomenclature. Being physical objects that can be re-studied by other researchers, types permanently link taxonomy (an artificial agreement to classify biological ... ...

Abstract	Nomenclatural type definitions are one of the most important concepts in biological nomenclature. Being physical objects that can be re-studied by other researchers, types permanently link taxonomy (an artificial agreement to classify biological diversity) with nomenclature (an artificial agreement to name biological diversity). Two proposals to amend the International Code of Nomenclature for algae, fungi, and plants (ICN), allowing DNA sequences alone (of any region and extent) to serve as types of taxon names for voucherless fungi (mainly putative taxa from environmental DNA sequences), have been submitted to be voted on at the 11
Language	English
Publishing date	2018-05-24
Publishing country	England
Document type	Journal Article
ZDB-ID	2666116-0
ISSN	2210-6359 ; 2210-6340
ISSN (online)	2210-6359
ISSN	2210-6340
DOI	10.5598/imafungus.2018.09.01.10
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Article ; Online: Considerations and consequences of allowing DNA sequence data as types of fungal taxa.

IMA fungus

2018

Abstract	Nomenclatural type definitions are one of the most important concepts in biological nomenclature. Being physical objects that can be re-studied by other researchers, types permanently link taxonomy (an artificial agreement to classify biological diversity) with nomenclature (an artificial agreement to name biological diversity). Two proposals to amend the International Code of Nomenclature for algae, fungi, and plants (ICN), allowing DNA sequences alone (of any region and extent) to serve as types of taxon names for voucherless fungi (mainly putative taxa from environmental DNA sequences), have been submitted to be voted on at the 11th International Mycological Congress (Puerto Rico, July 2018). We consider various genetic processes affecting the distribution of alleles among taxa and find that alleles may not consistently and uniquely represent the species within which they are contained. Should the proposals be accepted, the meaning of nomenclatural types would change in a fundamental way from physical objects as sources of data to the data themselves. Such changes are conducive to irreproducible science, the potential typification on artefactual data, and massive creation of names with low information content, ultimately causing nomenclatural instability and unnecessary work for future researchers that would stall future explorations of fungal diversity. We conclude that the acceptance of DNA sequences alone as types of names of taxa, under the terms used in the current proposals, is unnecessary and would not solve the problem of naming putative taxa known only from DNA sequences in a scientifically defensible way. As an alternative, we highlight the use of formulas for naming putative taxa (candidate taxa) that do not require any modification of the ICN.
Keywords	IMC11 ; nomenclature ; speciation ; taxonomy ; typification ; voucherless fungi
Subject code	612
Publishing date	2018-06-01
Publishing country	de
Document type	Article ; Online
Database	BASE - Bielefeld Academic Search Engine (life sciences selection)

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