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  1. Article ; Online: Kidney organoids: current knowledge and future directions.

    Khoshdel-Rad, Niloofar / Ahmadi, Amin / Moghadasali, Reza

    Cell and tissue research

    2022  Volume 387, Issue 2, Page(s) 207–224

    Abstract: The kidney is a highly complex organ in the human body. Although creating an in vitro model of the human kidney is challenging, tremendous advances have been made in recent years. Kidney organoids are in vitro kidney models that are generated from stem ... ...

    Abstract The kidney is a highly complex organ in the human body. Although creating an in vitro model of the human kidney is challenging, tremendous advances have been made in recent years. Kidney organoids are in vitro kidney models that are generated from stem cells in three-dimensional (3D) cultures. They exhibit remarkable degree of similarities with the native tissue in terms of cell type, morphology, and function. The establishment of 3D kidney organoids facilitates a mechanistic study of cell communications, and these organoids can be used for drug screening, disease modeling, and regenerative medicine applications. This review discusses the cellular complexity during in vitro kidney generation. We intend to highlight recent progress in kidney organoids and the applications of these relatively new technologies.
    MeSH term(s) Humans ; Kidney ; Organoids ; Regenerative Medicine/methods
    Language English
    Publishing date 2022-01-28
    Publishing country Germany
    Document type Journal Article ; Review
    ZDB-ID 125067-x
    ISSN 1432-0878 ; 0302-766X
    ISSN (online) 1432-0878
    ISSN 0302-766X
    DOI 10.1007/s00441-021-03565-x
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article: Human ovarian tissue in-vitro culture: primordial follicle activation as a new strategy for female fertility preservation.

    Ghezelayagh, Zeinab / Khoshdel-Rad, Niloofar / Ebrahimi, Bita

    Cytotechnology

    2022  Volume 74, Issue 1, Page(s) 1–15

    Abstract: Cryopreservation and transplantation of ovarian tissue is the only fertility preservation option used for prepubertal girls and women who don't have a chance for embryo or oocyte vitrification. For women with aggressive cancer, hormone-responsive ... ...

    Abstract Cryopreservation and transplantation of ovarian tissue is the only fertility preservation option used for prepubertal girls and women who don't have a chance for embryo or oocyte vitrification. For women with aggressive cancer, hormone-responsive malignancies, autoimmune diseases, etc. ovary transplantation cannot be performed so an alternative technology called in-vitro follicle activation is thinkable. In this method, dormant primordial follicles are activated from the resting primordial pool by in-vitro culture and enter their growth phase. Different in-vitro culture media and supplements in addition to various culturing methods have been conducted for activating these dormant follicles. Furthermore, several signaling pathways such as Hippo, phosphatidylinositol-3-kinase, and mTOR influence follicle activation. Therefore, the addition of different activators of these signaling pathways can beneficially regulate this culture system. This review summarizes the findings on different aspects of human ovarian tissue culture strategies for in-vitro follicular activation, their medium, and different factors involved in this activation. Afterward, signaling pathways important for follicle activation and their clinical applications towards improving activation in culture are also reviewed.
    Language English
    Publishing date 2022-01-04
    Publishing country United States
    Document type Journal Article ; Review
    ZDB-ID 1035772-5
    ISSN 0920-9069
    ISSN 0920-9069
    DOI 10.1007/s10616-021-00510-2
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: Kidney development and function: ECM cannot be ignored.

    Abdollahzadeh, Fatemeh / Khoshdel-Rad, Niloofar / Moghadasali, Reza

    Differentiation; research in biological diversity

    2022  Volume 124, Page(s) 28–42

    Abstract: The extracellular matrix (ECM) is an essential network entity surrounding and supporting cells to guarantee their physiological function and homeostasis. It is important to choose the most appropriate ECM for in vitro experiments of mammalian cells for ... ...

    Abstract The extracellular matrix (ECM) is an essential network entity surrounding and supporting cells to guarantee their physiological function and homeostasis. It is important to choose the most appropriate ECM for in vitro experiments of mammalian cells for tissue engineering and functional analyses. Although most studies have examined optimization of the correct ECM that can be used to assess mammalian cells, a comprehensive study has not been conducted. In this review, we present the factors to be taken into consideration when designing or optimizing an appropriate ECM for development and maintenance of kidney tissues and compare the previously reported ECMs.
    MeSH term(s) Animals ; Extracellular Matrix ; Homeostasis ; Kidney ; Mammals ; Tissue Engineering
    Language English
    Publishing date 2022-02-09
    Publishing country England
    Document type Journal Article ; Review
    ZDB-ID 184540-8
    ISSN 1432-0436 ; 0301-4681
    ISSN (online) 1432-0436
    ISSN 0301-4681
    DOI 10.1016/j.diff.2022.02.001
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article: Kidney organoids: current knowledge and future directions

    Khoshdel-Rad, Niloofar / Ahmadi, Amin / Moghadasali, Reza

    Cell and tissue research. 2022 Feb., v. 387, no. 2

    2022  

    Abstract: The kidney is a highly complex organ in the human body. Although creating an in vitro model of the human kidney is challenging, tremendous advances have been made in recent years. Kidney organoids are in vitro kidney models that are generated from stem ... ...

    Abstract The kidney is a highly complex organ in the human body. Although creating an in vitro model of the human kidney is challenging, tremendous advances have been made in recent years. Kidney organoids are in vitro kidney models that are generated from stem cells in three-dimensional (3D) cultures. They exhibit remarkable degree of similarities with the native tissue in terms of cell type, morphology, and function. The establishment of 3D kidney organoids facilitates a mechanistic study of cell communications, and these organoids can be used for drug screening, disease modeling, and regenerative medicine applications. This review discusses the cellular complexity during in vitro kidney generation. We intend to highlight recent progress in kidney organoids and the applications of these relatively new technologies.
    Keywords drugs ; humans ; kidneys ; medicine ; models ; organoids ; research
    Language English
    Dates of publication 2022-02
    Size p. 207-224.
    Publishing place Springer Berlin Heidelberg
    Document type Article
    Note Review
    ZDB-ID 125067-x
    ISSN 1432-0878 ; 0302-766X
    ISSN (online) 1432-0878
    ISSN 0302-766X
    DOI 10.1007/s00441-021-03565-x
    Database NAL-Catalogue (AGRICOLA)

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  5. Article: Functional Enrichment Analysis of Tumor Microenvironment-Driven Molecular Alterations That Facilitate Epithelial-to-Mesenchymal Transition and Distant Metastasis.

    Abdolahi, Mahnaz / Ghaedi Talkhounche, Parnian / Derakhshan Nazari, Mohammad Hossein / Hosseininia, Haniyeh Sadat / Khoshdel-Rad, Niloofar / Ebrahimi Sadrabadi, Amin

    Bioinformatics and biology insights

    2024  Volume 18, Page(s) 11779322241227722

    Abstract: Nowadays, hepatocellular carcinoma (HCC) is the second leading cause of cancer deaths, and identifying the effective factors in causing this disease can play an important role in its prevention and treatment. Tumors provide effective agents for invasion ... ...

    Abstract Nowadays, hepatocellular carcinoma (HCC) is the second leading cause of cancer deaths, and identifying the effective factors in causing this disease can play an important role in its prevention and treatment. Tumors provide effective agents for invasion and metastasis to other organs by establishing appropriate communication between cancer cells and the microenvironment. Epithelial-to-mesenchymal transition (EMT) can be mentioned as one of the effective phenomena in tumor invasion and metastasis. Several factors are involved in inducing this phenomenon in the tumor microenvironment, which helps the tumor survive and migrate to other places. It can be effective to identify these factors in the use of appropriate treatment strategies and greater patient survival. This study investigated the molecular differences between tumor border cells and tumor core cells or internal tumor cells in HCC for specific EMT genes. Expression of NOTCH1, ID1, and LST1 genes showed a significant increase at the HCC tumor border. Targeting these genes can be considered as a useful therapeutic strategy to prevent distant metastasis in HCC patients.
    Language English
    Publishing date 2024-02-04
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2423808-9
    ISSN 1177-9322
    ISSN 1177-9322
    DOI 10.1177/11779322241227722
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  6. Article: Cellular and Molecular Mechanisms of Kidney Development: From the Embryo to the Kidney Organoid.

    Khoshdel Rad, Niloofar / Aghdami, Nasser / Moghadasali, Reza

    Frontiers in cell and developmental biology

    2020  Volume 8, Page(s) 183

    Abstract: Development of the metanephric kidney is strongly dependent on complex signaling pathways and cell-cell communication between at least four major progenitor cell populations (ureteric bud, nephron, stromal, and endothelial progenitors) in the nephrogenic ...

    Abstract Development of the metanephric kidney is strongly dependent on complex signaling pathways and cell-cell communication between at least four major progenitor cell populations (ureteric bud, nephron, stromal, and endothelial progenitors) in the nephrogenic zone. In recent years, the improvement of human-PSC-derived kidney organoids has opened new avenues of research on kidney development, physiology, and diseases. Moreover, the kidney organoids provide a three-dimensional (3D)
    Language English
    Publishing date 2020-03-24
    Publishing country Switzerland
    Document type Journal Article ; Review
    ZDB-ID 2737824-X
    ISSN 2296-634X
    ISSN 2296-634X
    DOI 10.3389/fcell.2020.00183
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  7. Article ; Online: Cell and cell-derivative-based therapy for liver diseases: current approaches and future promises.

    Zahmatkesh, Ensieh / Khoshdel Rad, Niloofar / Hossein-Khannazer, Nikoo / Mohamadnejad, Mehdi / Gramignoli, Roberto / Najimi, Mustapha / Malekzadeh, Reza / Hassan, Moustapha / Vosough, Massoud

    Expert review of gastroenterology & hepatology

    2023  Volume 17, Issue 3, Page(s) 237–249

    Abstract: Introduction: According to the recent updates from World Health Organization, liver diseases are the 12th most common cause of mortality. Currently, orthotopic liver transplantation (OLT) is the most effective and the only treatment for end-stage liver ... ...

    Abstract Introduction: According to the recent updates from World Health Organization, liver diseases are the 12th most common cause of mortality. Currently, orthotopic liver transplantation (OLT) is the most effective and the only treatment for end-stage liver diseases. Owing to several shortcomings like finite numbers of healthy organ donors, lifelong immunosuppression, and complexity of the procedure, cell and cell-derivatives therapies have emerged as a potential therapeutic alternative for liver diseases. Various cell types and therapies have been proposed and their therapeutic effects evaluated in preclinical or clinical studies, including hepatocytes, hepatocyte-like cells (HLCs) derived from stem cells, human liver stem cells (HLSCs), combination therapies with various types of cells, organoids, and implantable cell-biomaterial constructs with synthetic and natural polymers or even decellularized extracellular matrix (ECM).
    Areas covered: In this review, we highlighted the current status of cell and cell-derivative-based therapies for liver diseases. Furthermore, we discussed future prospects of using HLCs, liver organoids, and their combination therapies.
    Expert opinion: Promising application of stem cell-based techniques including iPSC technology has been integrated into novel techniques such as gene editing, directed differentiation, and organoid technology. iPSCs offer promising prospects to represent novel therapeutic strategies and modeling liver diseases.
    MeSH term(s) Humans ; Liver Diseases/therapy ; Liver Diseases/metabolism ; Liver/metabolism ; Hepatocytes/metabolism ; Induced Pluripotent Stem Cells/metabolism ; End Stage Liver Disease/therapy ; Cell Differentiation
    Language English
    Publishing date 2023-02-02
    Publishing country England
    Document type Review ; Journal Article
    ZDB-ID 2481021-6
    ISSN 1747-4132 ; 1747-4124
    ISSN (online) 1747-4132
    ISSN 1747-4124
    DOI 10.1080/17474124.2023.2172398
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  8. Article ; Online: Autosomal dominant polycystic kidney disease: Disrupted pathways and potential therapeutic interventions.

    Malekshahabi, Talieh / Khoshdel Rad, Niloofar / Serra, Andreas L / Moghadasali, Reza

    Journal of cellular physiology

    2019  Volume 234, Issue 8, Page(s) 12451–12470

    Abstract: Autosomal dominant polycystic kidney disease (ADPKD) is a monogenic inherited renal cystic disease that occurs in different races worldwide. It is characterized by the development of a multitude of renal cysts, which leads to massive enlargement of the ... ...

    Abstract Autosomal dominant polycystic kidney disease (ADPKD) is a monogenic inherited renal cystic disease that occurs in different races worldwide. It is characterized by the development of a multitude of renal cysts, which leads to massive enlargement of the kidney and often to renal failure in adulthood. ADPKD is caused by a mutation in PKD1 or PKD2 genes encoding the proteins polycystin-1 and polycystin-2, respectively. Recent studies showed that cyst formation and growth result from deregulation of multiple cellular pathways like proliferation, apoptosis, metabolic processes, cell polarity, and immune defense. In ADPKD, intracellular cyclic adenosine monophosphate (cAMP) promotes cyst enlargement by stimulating cell proliferation and transepithelial fluid secretion. Several interventions affecting many of these defective signaling pathways have been effective in animal models and some are currently being tested in clinical trials. Moreover, the stem cell therapy can improve nephropathies and according to studies were done in this field, can be considered as a hopeful therapeutic approach in future for PKD. This study provides an in-depth review of the relevant molecular pathways associated with the pathogenesis of ADPKD and their implications in development of potential therapeutic strategies.
    MeSH term(s) Gene Expression Regulation ; Genetic Predisposition to Disease ; Humans ; Polycystic Kidney, Autosomal Dominant/genetics ; Polycystic Kidney, Autosomal Dominant/metabolism ; TRPP Cation Channels
    Chemical Substances TRPP Cation Channels ; polycystic kidney disease 1 protein ; polycystic kidney disease 2 protein
    Language English
    Publishing date 2019-01-15
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't ; Review
    ZDB-ID 3116-1
    ISSN 1097-4652 ; 0021-9541
    ISSN (online) 1097-4652
    ISSN 0021-9541
    DOI 10.1002/jcp.28094
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  9. Article ; Online: Outbreak of chronic renal failure: will this be a delayed heritage of COVID-19?

    Khoshdel-Rad, Niloofar / Zahmatkesh, Ensieh / Shpichka, Anastasia / Timashev, Peter / Vosough, Massoud

    Journal of nephrology

    2020  Volume 34, Issue 1, Page(s) 3–5

    MeSH term(s) Angiotensin-Converting Enzyme 2/physiology ; COVID-19/complications ; COVID-19/epidemiology ; COVID-19/therapy ; Humans ; Kidney Failure, Chronic/epidemiology ; Kidney Failure, Chronic/therapy ; Kidney Failure, Chronic/virology ; SARS-CoV-2/pathogenicity
    Chemical Substances Angiotensin-Converting Enzyme 2 (EC 3.4.17.23)
    Keywords covid19
    Language English
    Publishing date 2020-09-02
    Publishing country Italy
    Document type Editorial
    ZDB-ID 1093991-x
    ISSN 1724-6059 ; 1120-3625 ; 1121-8428
    ISSN (online) 1724-6059
    ISSN 1120-3625 ; 1121-8428
    DOI 10.1007/s40620-020-00851-9
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  10. Article ; Online: Promoting Maturation of Human Pluripotent Stem Cell-Derived Renal Microtissue by Incorporation of Endothelial and Mesenchymal Cells.

    Khoshdel-Rad, Niloofar / Zahmatkesh, Ensieh / Moeinvaziri, Farideh / Haghparast, Newsha / Baharvand, Hossein / Aghdami, Nasser / Moghadasali, Reza

    Stem cells and development

    2021  Volume 30, Issue 8, Page(s) 428–440

    Abstract: Directed differentiation of human pluripotent stem cells (hPSCs) uses a growing number of small molecules and growth factors required for in vitro generation of renal lineage cells. Although current protocols are relatively inefficient or expensive. The ... ...

    Abstract Directed differentiation of human pluripotent stem cells (hPSCs) uses a growing number of small molecules and growth factors required for in vitro generation of renal lineage cells. Although current protocols are relatively inefficient or expensive. The first objective of the present work was to establish a new differentiation protocol for generating renal precursors. We sought to determine if inducer of definitive endoderm 1 (IDE1), a cost-effective small molecule, can be used to replace activin A. Gene expression data showed significantly increased expressions of nephrogenic markers in cells differentiated with 20 nM IDE1 compared with cells differentiated with activin A. Thus, renal lineage cells could be generated by this alternative approach. Afterward, we determined whether coculture of endothelial and mesenchymal cells could increase the maturation of three-dimensional (3D) renal structures. For this purpose, we employed a 3D coculture system in which hPSC-derived kidney precursors were cocultured with endothelial cells (ECs) and mesenchymal stem cells (MSCs), hereafter named RMEM (renal microtissue derived from coculture of renal precursors with endothelial and mesenchymal stem cells). hPSC-derived kidney precursors were cultured either alone [renal microtissue (RM)] or in coculture with human umbilical vein endothelial cells and human bone marrow-derived mesenchymal stem cells at an approximate ratio of 10:7:2, respectively. Immunofluorescent staining showed expressions of kidney-specific markers synaptopodin, LTL, and E-cadherin, as well as CD31
    MeSH term(s) Cell Differentiation/genetics ; Cell Line ; Cells, Cultured ; Coculture Techniques/methods ; Gene Expression ; Human Umbilical Vein Endothelial Cells/cytology ; Human Umbilical Vein Endothelial Cells/metabolism ; Humans ; Immunohistochemistry ; Kidney/cytology ; Kidney/metabolism ; Mesenchymal Stem Cells/cytology ; Mesenchymal Stem Cells/metabolism ; Nanog Homeobox Protein/genetics ; Nanog Homeobox Protein/metabolism ; Octamer Transcription Factor-3/genetics ; Octamer Transcription Factor-3/metabolism ; Pluripotent Stem Cells/cytology ; Pluripotent Stem Cells/metabolism ; Reverse Transcriptase Polymerase Chain Reaction
    Chemical Substances Nanog Homeobox Protein ; Octamer Transcription Factor-3
    Language English
    Publishing date 2021-04-07
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2142214-X
    ISSN 1557-8534 ; 1547-3287
    ISSN (online) 1557-8534
    ISSN 1547-3287
    DOI 10.1089/scd.2020.0189
    Database MEDical Literature Analysis and Retrieval System OnLINE

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