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  1. Article ; Online: Altered expression of anti-apoptotic protein Api5 affects breast tumorigenesis.

    Kuttanamkuzhi, Abhijith / Panda, Debiprasad / Malaviya, Radhika / Gaidhani, Gautami / Lahiri, Mayurika

    BMC cancer

    2023  Volume 23, Issue 1, Page(s) 374

    Abstract: Background: Apoptosis or programmed cell death plays a vital role in maintaining homeostasis and, therefore, is a tightly regulated process. Deregulation of apoptosis signalling can favour carcinogenesis. Apoptosis inhibitor 5 (Api5), an inhibitor of ... ...

    Abstract Background: Apoptosis or programmed cell death plays a vital role in maintaining homeostasis and, therefore, is a tightly regulated process. Deregulation of apoptosis signalling can favour carcinogenesis. Apoptosis inhibitor 5 (Api5), an inhibitor of apoptosis, is upregulated in cancers. Interestingly, Api5 is shown to regulate both apoptosis and cell proliferation. To address the precise functional significance of Api5 in carcinogenesis here we investigate the role of Api5 in breast carcinogenesis.
    Methods: Initially, we carried out in silico analyses using TCGA and GENT2 datasets to understand expression pattern of API5 in breast cancer patients followed by investigating the protein expression in Indian breast cancer patient samples. To investigate the functional importance of Api5 in breast carcinogenesis, we utilised MCF10A 3D breast acinar cultures and spheroid cultures of malignant breast cells with altered Api5 expression. Various phenotypic and molecular changes induced by altered Api5 expression were studied using these 3D culture models. Furthermore, in vivo tumorigenicity studies were used to confirm the importance of Api5 in breast carcinogenesis.
    Results: In-silico analysis revealed elevated levels of Api5 transcript in breast cancer patients which correlated with poor prognosis. Overexpression of Api5 in non-tumorigenic breast acinar cultures resulted in increased proliferation and cells exhibited a partial EMT-like phenotype with higher migratory potential and disruption in cell polarity. Furthermore, during acini development, the influence of Api5 is mediated via the combined action of FGF2 activated PDK1-Akt/cMYC signalling and Ras-ERK pathways. Conversely, Api5 knock-down downregulated FGF2 signalling leading to reduced proliferation and diminished in vivo tumorigenic potential of the breast cancer cells.
    Conclusion: Taken together, our study identifies Api5 as a central player involved in regulating multiple events during breast carcinogenesis including proliferation, and apoptosis through deregulation of FGF2 signalling pathway.
    MeSH term(s) Humans ; Apoptosis Regulatory Proteins/metabolism ; Fibroblast Growth Factor 2 ; Apoptosis ; Cell Transformation, Neoplastic ; Neoplasms ; Carcinogenesis ; Cell Proliferation ; Cell Line, Tumor ; Nuclear Proteins/genetics
    Chemical Substances Apoptosis Regulatory Proteins ; Fibroblast Growth Factor 2 (103107-01-3) ; API5 protein, human ; Nuclear Proteins
    Language English
    Publishing date 2023-04-25
    Publishing country England
    Document type Journal Article
    ZDB-ID 2041352-X
    ISSN 1471-2407 ; 1471-2407
    ISSN (online) 1471-2407
    ISSN 1471-2407
    DOI 10.1186/s12885-023-10866-7
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  2. Article ; Online: Phospholipid Mediator Induced Transformation in Three-Dimensional Cultures.

    Kuttanamkuzhi, Abhijith / Anandi, Libi / Chakravarty, Vaishali / Lahiri, Mayurika

    Journal of visualized experiments : JoVE

    2022  , Issue 185

    Abstract: Several models have been developed to study cancer, such as rodent models and established cell lines. Valuable insights into carcinogenesis have been provided by studies using these models. Cell lines have provided an understanding of the deregulation of ...

    Abstract Several models have been developed to study cancer, such as rodent models and established cell lines. Valuable insights into carcinogenesis have been provided by studies using these models. Cell lines have provided an understanding of the deregulation of molecular signaling associated with breast tumorigenesis, while rodent models are widely used to study cellular and molecular characteristics of breast cancer in vivo. The establishment of 3D cultures of breast epithelial and cancerous cells aids in bridging the gap between in vivo and in vitro models by mimicking the in vivo conditions in vitro. This model can be used to understand the deregulation of complex molecular signaling events and the cellular characteristics during breast carcinogenesis. Here, a 3D culture system is modified to study a phospholipid mediator-induced (Platelet Activating Factor, PAF) transformation. Immunomodulators and other secreted molecules play a major role in tumor initiation and progression in the breast. In the present study, 3D acinar cultures of breast epithelial cells are exposed to PAF exhibited transformation characteristics such as loss of polarity and altered cellular characteristics. This 3D culture system will assist in shedding light on genetic and/or epigenetic perturbations induced by various small molecule entities in the tumor microenvironment. Additionally, this system will also provide a platform for the identification of novel as well as known genes that may be involved in the process of transformation.
    MeSH term(s) Cell Line ; Cell Transformation, Neoplastic/genetics ; Cell Transformation, Neoplastic/metabolism ; Epithelial Cells ; Humans ; Neoplasms/metabolism ; Phospholipids/metabolism ; Tumor Microenvironment
    Chemical Substances Phospholipids
    Language English
    Publishing date 2022-07-27
    Publishing country United States
    Document type Journal Article ; Video-Audio Media ; Research Support, Non-U.S. Gov't
    ZDB-ID 2259946-0
    ISSN 1940-087X ; 1940-087X
    ISSN (online) 1940-087X
    ISSN 1940-087X
    DOI 10.3791/64146
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: NAD(P)H:Quinone Acceptor Oxidoreductase 1 (NQO1) Activatable Salicylamide H

    Roy, Naveen J / Save, Shreyada N / Sharma, Virender Kumar / Abraham, Benchamin / Kuttanamkuzhi, Abhijith / Sharma, Shilpy / Lahiri, Mayurika / Talukdar, Pinaki

    Chemistry (Weinheim an der Bergstrasse, Germany)

    2023  Volume 29, Issue 51, Page(s) e202301412

    Abstract: NAD(P)H:quinone acceptor oxidoreductase 1 (NQO1), a detoxifying enzyme overexpressed in tumors, plays a key role in protecting cancer cells against oxidative stress and thus has been considered an attractive candidate for activating prodrug(s). Herein, ... ...

    Abstract NAD(P)H:quinone acceptor oxidoreductase 1 (NQO1), a detoxifying enzyme overexpressed in tumors, plays a key role in protecting cancer cells against oxidative stress and thus has been considered an attractive candidate for activating prodrug(s). Herein, we report the first use of NQO1 for the selective activation of 'protransporter' systems in cancer cells leading to the induction of apoptosis. Salicylamides, easily synthesizable small molecules, have been effectively used for efficient H
    MeSH term(s) Humans ; Female ; NAD ; NAD(P)H Dehydrogenase (Quinone)/metabolism ; Benzoquinones ; Quinones/metabolism ; Breast Neoplasms
    Chemical Substances quinone (3T006GV98U) ; NAD (0U46U6E8UK) ; NAD(P)H Dehydrogenase (Quinone) (EC 1.6.5.2) ; Benzoquinones ; Quinones ; NQO1 protein, human (EC 1.6.5.2)
    Language English
    Publishing date 2023-08-09
    Publishing country Germany
    Document type Journal Article
    ZDB-ID 1478547-X
    ISSN 1521-3765 ; 0947-6539
    ISSN (online) 1521-3765
    ISSN 0947-6539
    DOI 10.1002/chem.202301412
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Differential DNA damage repair and PARP inhibitor vulnerability of the mammary epithelial lineages.

    Kim, Hyeyeon / Aliar, Kazeera / Tharmapalan, Pirashaanthy / McCloskey, Curtis W / Kuttanamkuzhi, Abhijith / Grünwald, Barbara T / Palomero, Luis / Mahendralingam, Mathepan J / Waas, Matthew / Mer, Arvind S / Elliott, Mitchell J / Zhang, Bowen / Al-Zahrani, Khalid N / Langille, Ellen R / Parsons, Michael / Narala, Swami / Hofer, Stefan / Waterhouse, Paul D / Hakem, Razqallah /
    Haibe-Kains, Benjamin / Kislinger, Thomas / Schramek, Daniel / Cescon, David W / Pujana, Miquel A / Berman, Hal K / Khokha, Rama

    Cell reports

    2023  Volume 42, Issue 10, Page(s) 113256

    Abstract: It is widely assumed that all normal somatic cells can equally perform homologous recombination (HR) and non-homologous end joining in the DNA damage response (DDR). Here, we show that the DDR in normal mammary gland inherently depends on the epithelial ... ...

    Abstract It is widely assumed that all normal somatic cells can equally perform homologous recombination (HR) and non-homologous end joining in the DNA damage response (DDR). Here, we show that the DDR in normal mammary gland inherently depends on the epithelial cell lineage identity. Bioinformatics, post-irradiation DNA damage repair kinetics, and clonogenic assays demonstrated luminal lineage exhibiting a more pronounced DDR and HR repair compared to the basal lineage. Consequently, basal progenitors were far more sensitive to poly(ADP-ribose) polymerase inhibitors (PARPis) in both mouse and human mammary epithelium. Furthermore, PARPi sensitivity of murine and human breast cancer cell lines as well as patient-derived xenografts correlated with their molecular resemblance to the mammary progenitor lineages. Thus, mammary epithelial cells are intrinsically divergent in their DNA damage repair capacity and PARPi vulnerability, potentially influencing the clinical utility of this targeted therapy.
    MeSH term(s) Humans ; Animals ; Mice ; Poly(ADP-ribose) Polymerase Inhibitors/pharmacology ; Antineoplastic Agents/pharmacology ; DNA Repair ; Homologous Recombination ; DNA Damage
    Chemical Substances Poly(ADP-ribose) Polymerase Inhibitors ; Antineoplastic Agents
    Language English
    Publishing date 2023-10-16
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 2649101-1
    ISSN 2211-1247 ; 2211-1247
    ISSN (online) 2211-1247
    ISSN 2211-1247
    DOI 10.1016/j.celrep.2023.113256
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  5. Article ; Online: Differential DNA damage repair and PARP inhibitor vulnerability of the mammary epithelial lineages.

    Kim, Hyeyeon / Aliar, Kazeera / Tharmapalan, Pirashaanthy / McCloskey, Curtis W / Kuttanamkuzhi, Abhijith / Grünwald, Barbara T / Palomero, Luis / Mahendralingam, Mathepan J / Waas, Matthew / Mer, Arvind S / Elliott, Mitchell J / Zhang, Bowen / Al-Zahrani, Khalid N / Langille, Ellen R / Parsons, Michael / Narala, Swami / Hofer, Stefan / Waterhouse, Paul D / Hakem, Razqallah /
    Haibe-Kains, Benjamin / Kislinger, Thomas / Schramek, Daniel / Cescon, David W / Pujana, Miquel A / Berman, Hal K / Khokha, Rama

    Cell reports

    2023  Volume 42, Issue 11, Page(s) 113382

    Language English
    Publishing date 2023-10-25
    Publishing country United States
    Document type Published Erratum
    ZDB-ID 2649101-1
    ISSN 2211-1247 ; 2211-1247
    ISSN (online) 2211-1247
    ISSN 2211-1247
    DOI 10.1016/j.celrep.2023.113382
    Database MEDical Literature Analysis and Retrieval System OnLINE

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