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  1. Article: A unique ferrous iron binding mode is associated with large conformational changes for the transport protein FpvC of Pseudomonas aeruginosa

    Vigouroux, Armelle / Aumont‐Nicaise, Magali / Boussac, Alain / Marty, Loïc / Lo Bello, Léa / Legrand, Pierre / Brillet, Karl / Schalk, Isabelle J / Moréra, Solange

    FEBS journal. 2020 Jan., v. 287, no. 2

    2020  

    Abstract: Pseudomonas aeruginosa secretes pyoverdine, a major siderophore to get access to iron, an essential nutrient. Pyoverdine scavenges ferric iron in the bacterial environment with the resulting complex internalized by bacteria. Releasing of iron from ... ...

    Abstract Pseudomonas aeruginosa secretes pyoverdine, a major siderophore to get access to iron, an essential nutrient. Pyoverdine scavenges ferric iron in the bacterial environment with the resulting complex internalized by bacteria. Releasing of iron from pyoverdine in the periplasm involves an iron reduction by an inner membrane reductase and two solute‐binding proteins (SBPs) FpvC and FpvF in association with their ABC transporter. FpvC and FpvF belong to two different subgroups of SBPs within the structural cluster A: FpvC and FpvF were proposed to be a metal‐binding protein and a ferrisiderophore‐binding protein respectively. Here, we report the redox state and the binding mode of iron to FpvC. We first solved the crystal structure of FpvC bound to a fortuitous Ni²⁺ by single anomalous dispersion method. Using a different protein purification strategy, we determined the structure of FpvC with manganese and iron, which binds to FpvC in a ferrous state as demonstrated by electron paramagnetic resonance. FpvC is the first example of a hexahistidine metal site among SBPs in which the Fe²⁺ redox state is stabilized under aerobic conditions. Using biophysics methods, we showed that FpvC reversibly bind to a broad range of divalent ions. The structure of a mutant mimicking the apo FpvC reveals a protein in an open state with large conformational changes when compared with the metal‐bound FpvC. These results highlight that the canonical metal site in FpvC is distinct from those yet described in SBPs and they provide new insights into the mechanism of PVD‐Fe dissociation in P. aeruginosa.
    Keywords ABC transporters ; Pseudomonas aeruginosa ; biophysics ; crystal structure ; dissociation ; electron paramagnetic resonance spectroscopy ; iron ; manganese ; mutants ; oxidoreductases ; pyoverdines
    Language English
    Dates of publication 2020-01
    Size p. 295-309.
    Publishing place John Wiley & Sons, Ltd
    Document type Article
    Note NAL-AP-2-clean ; JOURNAL ARTICLE
    ZDB-ID 2173655-8
    ISSN 1742-4658 ; 1742-464X
    ISSN (online) 1742-4658
    ISSN 1742-464X
    DOI 10.1111/febs.15004
    Database NAL-Catalogue (AGRICOLA)

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  2. Article ; Online: AT-752 targets multiple sites and activities on the Dengue virus replication enzyme NS5.

    Feracci, Mikael / Eydoux, Cécilia / Fattorini, Véronique / Lo Bello, Lea / Gauffre, Pierre / Selisko, Barbara / Sutto-Ortiz, Priscila / Shannon, Ashleigh / Xia, Hongjie / Shi, Pei-Yong / Noel, Mathieu / Debart, Françoise / Vasseur, Jean-Jacques / Good, Steve / Lin, Kai / Moussa, Adel / Sommadossi, Jean-Pierre / Chazot, Aurélie / Alvarez, Karine /
    Guillemot, Jean-Claude / Decroly, Etienne / Ferron, François / Canard, Bruno

    Antiviral research

    2023  Volume 212, Page(s) 105574

    Abstract: AT-752 is a guanosine analogue prodrug active against dengue virus (DENV). In infected cells, it is metabolized into 2'-methyl-2'-fluoro guanosine 5'-triphosphate (AT-9010) which inhibits RNA synthesis in acting as a RNA chain terminator. Here we show ... ...

    Abstract AT-752 is a guanosine analogue prodrug active against dengue virus (DENV). In infected cells, it is metabolized into 2'-methyl-2'-fluoro guanosine 5'-triphosphate (AT-9010) which inhibits RNA synthesis in acting as a RNA chain terminator. Here we show that AT-9010 has several modes of action on DENV full-length NS5. AT-9010 does not inhibit the primer pppApG synthesis step significantly. However, AT-9010 targets two NS5-associated enzyme activities, the RNA 2'-O-MTase and the RNA-dependent RNA polymerase (RdRp) at its RNA elongation step. Crystal structure and RNA methyltransferase (MTase) activities of the DENV 2 MTase domain in complex with AT-9010 at 1.97 Å resolution shows the latter bound to the GTP/RNA-cap binding site, accounting for the observed inhibition of 2'-O but not N7-methylation activity. AT-9010 is discriminated ∼10 to 14-fold against GTP at the NS5 active site of all four DENV1-4 NS5 RdRps, arguing for significant inhibition through viral RNA synthesis termination. In Huh-7 cells, DENV1-4 are equally sensitive to AT-281, the free base of AT-752 (EC
    MeSH term(s) Humans ; Dengue/drug therapy ; Dengue Virus/physiology ; Guanosine/pharmacology ; Guanosine/metabolism ; Guanosine Triphosphate/metabolism ; RNA, Viral/metabolism ; Viral Nonstructural Proteins/genetics ; Virus Replication
    Chemical Substances Guanosine (12133JR80S) ; Guanosine Triphosphate (86-01-1) ; RNA, Viral ; Viral Nonstructural Proteins ; AT-752
    Language English
    Publishing date 2023-03-09
    Publishing country Netherlands
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ZDB-ID 306628-9
    ISSN 1872-9096 ; 0166-3542
    ISSN (online) 1872-9096
    ISSN 0166-3542
    DOI 10.1016/j.antiviral.2023.105574
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  3. Article ; Online: A unique ferrous iron binding mode is associated with large conformational changes for the transport protein FpvC of Pseudomonas aeruginosa.

    Vigouroux, Armelle / Aumont-Nicaise, Magali / Boussac, Alain / Marty, Loïc / Lo Bello, Léa / Legrand, Pierre / Brillet, Karl / Schalk, Isabelle J / Moréra, Solange

    The FEBS journal

    2019  Volume 287, Issue 2, Page(s) 295–309

    Abstract: Pseudomonas aeruginosa secretes pyoverdine, a major siderophore to get access to iron, an essential nutrient. Pyoverdine scavenges ferric iron in the bacterial environment with the resulting complex internalized by bacteria. Releasing of iron from ... ...

    Abstract Pseudomonas aeruginosa secretes pyoverdine, a major siderophore to get access to iron, an essential nutrient. Pyoverdine scavenges ferric iron in the bacterial environment with the resulting complex internalized by bacteria. Releasing of iron from pyoverdine in the periplasm involves an iron reduction by an inner membrane reductase and two solute-binding proteins (SBPs) FpvC and FpvF in association with their ABC transporter. FpvC and FpvF belong to two different subgroups of SBPs within the structural cluster A: FpvC and FpvF were proposed to be a metal-binding protein and a ferrisiderophore-binding protein respectively. Here, we report the redox state and the binding mode of iron to FpvC. We first solved the crystal structure of FpvC bound to a fortuitous Ni
    MeSH term(s) Bacterial Outer Membrane Proteins/chemistry ; Bacterial Outer Membrane Proteins/metabolism ; Binding Sites ; Iron/metabolism ; Molecular Dynamics Simulation ; Nickel/metabolism ; Oligopeptides/metabolism ; Protein Binding ; Pseudomonas aeruginosa/metabolism ; Solute Carrier Proteins/chemistry ; Solute Carrier Proteins/metabolism
    Chemical Substances Bacterial Outer Membrane Proteins ; Oligopeptides ; Solute Carrier Proteins ; Nickel (7OV03QG267) ; pyoverdin (8062-00-8) ; Iron (E1UOL152H7)
    Language English
    Publishing date 2019-07-26
    Publishing country England
    Document type Journal Article
    ZDB-ID 2173655-8
    ISSN 1742-4658 ; 1742-464X
    ISSN (online) 1742-4658
    ISSN 1742-464X
    DOI 10.1111/febs.15004
    Database MEDical Literature Analysis and Retrieval System OnLINE

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