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Article: Sarcomatoid hepatocellular carcinoma mimics hepatic abscess on contrast-enhanced ultrasound.

Luo, Haibo / Leng, Xiaoling / Chen, Guiwu / Liu, Wenqin / Xie, Yanhua

2024 Volume 12, Issue 2, Page(s) e8456

Abstract: Sarcomatoid hepatocellular carcinoma (SHCC) is a rare subtype of hepatocellular carcinoma characterized by abdominal pain or persistent fever with an inflammatory reaction. Here, we report a case of SHCC mimicking hepatic abscess described by not only ... ...

Abstract	Sarcomatoid hepatocellular carcinoma (SHCC) is a rare subtype of hepatocellular carcinoma characterized by abdominal pain or persistent fever with an inflammatory reaction. Here, we report a case of SHCC mimicking hepatic abscess described by not only ultrasonography but also computer tomography. SHCC is a rare subtype of hepatocellular carcinoma characterized by epithelial and mesenchymal tumor features with sarcomatoid morphology. Here, we report a case of SHCC described by ultrasonography and computer tomography as well as confirmed by pathological examination.
Language	English
Publishing date	2024-01-29
Publishing country	England
Document type	Case Reports
ZDB-ID	2740234-4
ISSN	2050-0904
ISSN	2050-0904
DOI	10.1002/ccr3.8456
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Article ; Online: Atomic Insights into the S Poisoning Effects of Single-Atom Catalysts in Li-S Batteries.

Li, Chang / Luo, Haibo / Li, Fengyu / Li, Fen

ACS omega

2023 Volume 8, Issue 48, Page(s) 45348–45357

Abstract: Here, we paved a new way to evaluate the susceptibility of M- ... ...

Abstract	Here, we paved a new way to evaluate the susceptibility of M-N
Language	English
Publishing date	2023-11-27
Publishing country	United States
Document type	Journal Article
ISSN	2470-1343
ISSN (online)	2470-1343
DOI	10.1021/acsomega.3c04166
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Article ; Online: A 16-year-old girl with familial adenomatous polyposis coli misdiagnosed as hemorrhoids.

Xiao, Taifu / Ma, Jingjing / Luo, Haibo / Liang, Daoming

Asian journal of surgery

2023 Volume 46, Issue 11, Page(s) 5303–5304

MeSH term(s)	Female ; Humans ; Adolescent ; Hemorrhoids ; Adenomatous Polyposis Coli ; Diagnostic Errors
Language	English
Publishing date	2023-09-13
Publishing country	Netherlands
Document type	Case Reports ; Letter
ZDB-ID	1068461-x
ISSN	0219-3108 ; 1015-9584
ISSN (online)	0219-3108
ISSN	1015-9584
DOI	10.1016/j.asjsur.2023.07.042
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Article ; Online: Creeping gastric cancer was found after gastrectomy: A case report.

Sun, Guowu / Chen, Jun / Luo, Haibo / Liang, Daoming

Asian journal of surgery

2023 Volume 47, Issue 1, Page(s) 806–807

MeSH term(s)	Humans ; Gastrectomy/adverse effects ; Gastric Stump ; Stomach Neoplasms/surgery ; Male ; Middle Aged
Language	English
Publishing date	2023-11-10
Publishing country	Netherlands
Document type	Case Reports ; Letter
ZDB-ID	1068461-x
ISSN	0219-3108 ; 1015-9584
ISSN (online)	0219-3108
ISSN	1015-9584
DOI	10.1016/j.asjsur.2023.10.052
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Article ; Online: Reconstructing bifurcation diagrams of chaotic circuits with reservoir computing.

Luo, Haibo / Du, Yao / Fan, Huawei / Wang, Xuan / Guo, Jianzhong / Wang, Xingang

Physical review. E

2024 Volume 109, Issue 2-1, Page(s) 24210

Abstract: Model-free reconstruction of bifurcation diagrams of Chua's circuits using the technique of parameter-aware reservoir computing is investigated. We demonstrate that (1) reservoir computer can be utilized as a noise filter to restore the system dynamics ... ...

Abstract	Model-free reconstruction of bifurcation diagrams of Chua's circuits using the technique of parameter-aware reservoir computing is investigated. We demonstrate that (1) reservoir computer can be utilized as a noise filter to restore the system dynamics from noisy signals; (2) for a single Chua circuit, a machine trained by the noisy time series measured at several sampling states is capable of reconstructing the whole bifurcation diagram of the circuit with a high precision; and (3) for two coupled chaotic Chua circuits with mismatched parameters, the machine trained by the noisy time series measured at several coupling strengths is able to anticipate the variation of the synchronization degree of the coupled circuits with respect to the coupling strength over a wide range. Our studies verify the capability of the technique of parameter-aware reservoir computing in learning the dynamics of chaotic circuits from noisy signals, signifying the potential application of this technique in reconstructing the bifurcation diagram of real-world chaotic systems.
Language	English
Publishing date	2024-03-15
Publishing country	United States
Document type	Journal Article
ZDB-ID	2844562-4
ISSN	2470-0053 ; 2470-0045
ISSN (online)	2470-0053
ISSN	2470-0045
DOI	10.1103/PhysRevE.109.024210
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Article ; Online: Functional of tongue sole (Cynoglossus semilaevis) gamma-interferon-inducible lysosomal thiol reductase with implications in innate immune reponse depend on CXXC active site

Liu, Meiyan / Tao, Mingxuan / Li, Jianfeng / Sang, Ming / Wu, Xiaolong / Luo, Haibo / Zhang, Jiaxin

Developmental and Comparative Immunology. 2023 Oct., v. 147 p.104901-

2023

Abstract: The enzyme gamma-interferon-inducible lysosomal thiol reductase (GILT) plays an important role in promoting the processing and presentation of major histocompatibility complex (MHC) class II-restricted antigens. It is also involved in MHC I-restricted ... ...

Abstract	The enzyme gamma-interferon-inducible lysosomal thiol reductase (GILT) plays an important role in promoting the processing and presentation of major histocompatibility complex (MHC) class II-restricted antigens. It is also involved in MHC I-restricted antigens catalyzing disulfide bond reduction in fishes’ adaptive immunity. The open reading frame of tongue sole (Cynoglossus semilaevis) GILT (tsGILT) gene is 771 bp long, encoding 257 amino acids, with a calculated molecular weight of 28.465 kDa and isoelectric point (pI) of 5.35. After induction with lipopolysaccharide, the expression of tsGILT mRNA was upregulated in spleen and kidney and recombinant tsGILT protein transferred to late endosomes and lysosomes in HeLa cells. The refolded tsGILT was capable of catalyzing the reduction of the interchain disulfide bonds against an IgG substrate depend on the active site CXXC motif at residues 75–78. The process of immune response to bacteria challenge needs GILT to catalyze the reduction of disulfide bond and unfolding native protein antigens, promoting their hydrolysis by proteases. Whether a single mutation or a double mutation of active site CXXC at residues75–78, the 3D structure of tsGILT protein has undergone major changes and lost its activity of catalyzing the reduction of the interchain disulfide bonds.
Keywords	Cynoglossus semilaevis ; active sites ; adaptive immunity ; disulfide bonds ; disulfides ; endosomes ; hydrolysis ; immune response ; isoelectric point ; kidneys ; lipopolysaccharides ; lysosomes ; major histocompatibility complex ; molecular weight ; mutation ; oxidoreductases ; proteinases ; spleen ; thiols ; Gamma-interferon-inducible lysosomal thiol reductase ; Lipopolysaccharide ; The subcellular localization ; Thiol reductase activity ; Tongue sole
Language	English
Dates of publication	2023-10
Publishing place	Elsevier Ltd
Document type	Article ; Online
ZDB-ID	752411-0
ISSN	1879-0089 ; 0145-305X
ISSN (online)	1879-0089
ISSN	0145-305X
DOI	10.1016/j.dci.2023.104901
Database	NAL-Catalogue (AGRICOLA)

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Zs.A 1327: Show issues

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Article ; Online: A preliminary report on the exploration of salivary bacterial diversity by the multiplex SNaPshot assay.

Wang, Shuangshuang / Song, Feng / Guo, Xiangnan / Gu, Liya / Tan, Weijia / Wu, Peiyan / Liang, Weibo / Luo, Haibo / Wang, Yanyun

Forensic science international. Genetics

2024 Volume 70, Page(s) 103032

Abstract: Salivary bacterial community composition is associated with the host's internal and environmental factors, which have potential applications in forensic practice. The 16S rRNA gene sequencing is the most commonly used strategy for detecting salivary ... ...

Abstract	Salivary bacterial community composition is associated with the host's internal and environmental factors, which have potential applications in forensic practice. The 16S rRNA gene sequencing is the most commonly used strategy for detecting salivary bacterial diversity; however, its platforms are not compatible with capillary electrophoresis (CE) platforms commonly used for forensic applications. Therefore, we attempted to detect the salivary bacterial diversity using a single nucleotide polymorphism (SNP) assay. Salivary bacterial diversity varies among diverse geographic locations, making it a potential supplementary biomarker for forensic geographic sourcing. To evaluate the performance of the multiplex SNaPshot assay, saliva samples from three geographic locations in China were analyzed using the multiplex SNaPshot assay and 16S rRNA gene sequencing. We screened SNPs from two high-relative-abundance salivary genera (Streptococcus and Veillonella) to construct a multiplex SNaPshot system that can be used on the CE platform. The stability and sensitivity of the multiplex SNaPshot system were also tested. A random forest classification model was used to classify samples from different regions to explore the ability of salivary bacteria to discriminate between geographic sources. Six bacterial SNPs were screened and a multiplex SNaPshot system was constructed. The stability results showed that the typing of salivary stains that were placed indoors for different days was not affected in this study. Two-thirds of mocked salivary stain samples showed more than 90% of typing results obtained for salivary stain samples with an input of 0.1 µl saliva. The results of principal coordinate analysis based on salivary bacterial diversity showed significant differences between samples from the three different geographic locations. The accuracy of the random forest classification was 66.67% based on the multiplex SNaPshot assay and 83.33% based on the 16S rRNA gene sequencing. In conclusion, this is the first attempt to detect salivary bacterial diversity using a multiplex SNaPshot bacterial SNP assay. The geographic difference in human salivary bacterial community composition was significant, as revealed by the multiplex SNaPshot assay; however, its performance in discriminating geographic sources was lower than that of 16S rRNA gene sequencing. This strategy based on bacterial SNP loci may favor the detection of human bacterial diversity in common forensic laboratories but requires further exploration in larger sample sizes and more bacterial SNP loci.
MeSH term(s)	Humans ; RNA, Ribosomal, 16S/genetics ; Electrophoresis, Capillary ; Bacteria/genetics ; Polymorphism, Single Nucleotide ; China
Chemical Substances	RNA, Ribosomal, 16S
Language	English
Publishing date	2024-03-08
Publishing country	Netherlands
Document type	Journal Article
ZDB-ID	2493339-9
ISSN	1878-0326 ; 1872-4973
ISSN (online)	1878-0326
ISSN	1872-4973
DOI	10.1016/j.fsigen.2024.103032
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Zs.A 6764: Show issues

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Article ; Online: Genetic structure and paternal admixture of the modern Chinese Zhuang population based on 37 Y-STRs and 233 Y-SNPs.

Wang, Fei / Song, Feng / Song, Mengyuan / Luo, Haibo / Hou, Yiping

Forensic science international. Genetics

2022 Volume 58, Page(s) 102681

Abstract: The Zhuang are the largest minority group in China and the aboriginal people of the Guangxi Zhuang Autonomous Region. Over thousands of years, the gene pool of the Zhuang has been shaped by the genetic admixture with the Han Chinese. However, little is ... ...

Abstract	The Zhuang are the largest minority group in China and the aboriginal people of the Guangxi Zhuang Autonomous Region. Over thousands of years, the gene pool of the Zhuang has been shaped by the genetic admixture with the Han Chinese. However, little is known about the paternal genetic structure of the modern Zhuang people. Here, we used a high-resolution panel comprising 233 Y-chromosomal single-nucleotide polymorphisms (Y-SNPs) and 37 Y-chromosomal short tandem repeats (Y-STRs) to illuminate the paternal genetic structure and affinities of the Zhuang population. Their Y-SNP haplogroup diversity reached 0.9580 with 44 different subhaplogroups and their Y-STR haplotype diversity reached 1.0. Several bioinformatics analyses were conducted comparing the Zhuang to various reference populations worldwide. Mismatch analysis suggested extensive intermarriages between the Zhuang and O2-dominant groups such as the Han. Genetic clustering analysis of Y-STRs revealed broad genetic affinities between the Zhuang and several geographically, linguistically, and the ethnically related groups such as the southern Han, Bouyei, Li, Miao, and Yao from China. Principal Component Analysis of Y-SNPs demonstrated long-term close genetic relationships among the Zhuang people, Hainan Han, Guangdong Han, and Southeast Asians. Combined Y-STR/Y-SNP analysis showed the Zhuang people and the Hainan Han share common ancestry, illuminating the patrilineal descent of the Zhuang and lending genetic support to commonly accepted ideas regarding the origin of the Hainan Han. Our analysis of Y-SNPs and Y-STRs not only revealed the fine-scale genetic structure of the Zhuang population, but also illuminated their paternal derivation, which is defined by the common ancestry with the Hainan Han, the introgression of southern Chinese groups such as the Han, Bouyei, Li, Miao, and Yao, the long-term phylogenetic relationships with Southeast Asians.
MeSH term(s)	Asians/genetics ; China ; Chromosomes, Human, Y ; Genetics, Population ; Haplotypes ; Humans ; Microsatellite Repeats ; Phylogeny ; Polymorphism, Single Nucleotide
Language	English
Publishing date	2022-02-23
Publishing country	Netherlands
Document type	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2493339-9
ISSN	1878-0326 ; 1872-4973
ISSN (online)	1878-0326
ISSN	1872-4973
DOI	10.1016/j.fsigen.2022.102681
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Article ; Online: Long-Term Outcomes of Iron Deficiency Before and After Bariatric Surgery: a Systematic Review and Meta-analysis.

Xia, Chuqi / Xiao, Taifu / Hu, Sheng / Luo, Haibo / Lu, Qiyu / Fu, Hongrui / Liang, Daoming

Obesity surgery

2023 Volume 33, Issue 3, Page(s) 897–910

Abstract: Purpose: This study reviews the prevalence of iron deficiency (ID) in bariatric surgery candidates and the long-term outcomes of the prevalence of ID after bariatric surgery.: Materials and methods: A systematic literature search and meta-analysis ... ...

Abstract	Purpose: This study reviews the prevalence of iron deficiency (ID) in bariatric surgery candidates and the long-term outcomes of the prevalence of ID after bariatric surgery. Materials and methods: A systematic literature search and meta-analysis were performed in PubMed for articles published by August 31, 2022, including these search terms: bariatric surgery, metabolic surgery, weight loss surgery, obesity surgery, sleeve gastrectomy, gastric banding, gastric bypass, duodenal switch, duodenojejunal bypass, iron, iron deficiency, sideropenia, and hypoferritinemia. Fifty-seven studies examining a total of 26,328 patients with morbidly obese were included in this meta-analysis finally. Results: The results showed a prevalence of 17% of ID in bariatric surgery candidates and a prevalence of 14%, 17%, 26%, 34%, 23%, 38%, and 23% of ID at 1-, 2-, 3-, 4-, 5-, 8-, and 10-year follow-up after bariatric surgery, respectively. Additionally, the results showed a prevalence of 15%, 19%, 35%, 38%, 29%, 30%, and 23% of ID at 1-, 2-, 3-, 4-, 5-, 8-, and 10-year follow-up after Roux-en-Y gastric bypass, respectively; a prevalence of 12%, 12%, 15%, 31%, and 17% of ID at 1-, 2-, 3-, 4-, and 5-year follow-up after sleeve gastrectomy, respectively; and a prevalence of 19% of ID at 1-year follow-up after anastomosis gastric bypass. Conclusion: As a result, preoperative evaluation and correction of ID may lead to better outcomes for bariatric surgery candidates. ID is also common in patients after bariatric procedures, especially RYGB. Long-term, even lifelong, medical and nutritional monitoring and tailored interventions are critical.
MeSH term(s)	Humans ; Obesity, Morbid/surgery ; Weight Loss ; Bariatric Surgery/methods ; Gastric Bypass/methods ; Iron Deficiencies ; Gastrectomy/methods ; Retrospective Studies ; Treatment Outcome
Language	English
Publishing date	2023-01-26
Publishing country	United States
Document type	Meta-Analysis ; Systematic Review ; Journal Article
ZDB-ID	1070827-3
ISSN	1708-0428 ; 0960-8923
ISSN (online)	1708-0428
ISSN	0960-8923
DOI	10.1007/s11695-023-06465-x
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Article: A bibliometric analysis of microbial forensics from 1984 to 2022: progress and research trends.

Guo, Xiangnan / Gu, Liya / Luo, Yue / Wang, Shuangshuang / Luo, Haibo / Song, Feng

Frontiers in microbiology

2023 Volume 14, Page(s) 1186372

Abstract: Microbial forensics is a rapidly evolving discipline that has gained significant momentum in recent years. The study evaluated relevant results over the last four decades from 1984 to 2022 all over the world, aiming to analyze the growing trends and ... ...

Abstract	Microbial forensics is a rapidly evolving discipline that has gained significant momentum in recent years. The study evaluated relevant results over the last four decades from 1984 to 2022 all over the world, aiming to analyze the growing trends and research orientations of microbial forensics. Using "microbial forensics" as the search topic in the Web of Science Core Collection, the systematic retrieval identified 579 documents relevant to the field and draw many statistical tables and maps to make the retrieval results visible. According to further bibliometric analysis, there are an increasing number of publications related to microbial forensics from the overall trend, with the highest number of publications recorded in 2021. In terms of the total number of articles, the USA and China were both the leading contributors to the field among 40 countries. The field has developed rapidly in recent years based on the development of next-generation sequencing. Over the course of its development, there are rich keywords in the research of scholars, which focus on diversity and identification. Moreover, despite the early hot topic being PCR (the use of PCR to probe microorganisms), in recent years, the topics, markers, and the potential application of microorganisms in forensic practice have become hot, which also indicates the future research directions of microbial forensic.
Language	English
Publishing date	2023-05-16
Publishing country	Switzerland
Document type	Journal Article ; Review
ZDB-ID	2587354-4
ISSN	1664-302X
ISSN	1664-302X
DOI	10.3389/fmicb.2023.1186372
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