LIVIVO - The Search Portal for Life Sciences

zur deutschen Oberfläche wechseln
Advanced search

Search results

Result 1 - 5 of total 5

Search options

  1. Article ; Online: Genetic dissection of the tissue-specific roles of type III effectors and phytotoxins in the pathogenicity of Pseudomonas syringae pv. syringae to cherry.

    Vadillo-Dieguez, Andrea / Zeng, Ziyue / Mansfield, John W / Grinberg, Nastasiya F / Lynn, Samantha C / Gregg, Adam / Connell, John / Harrison, Richard J / Jackson, Robert W / Hulin, Michelle T

    Molecular plant pathology

    2024  Volume 25, Issue 4, Page(s) e13451

    Abstract: When compared with other phylogroups (PGs) of the Pseudomonas syringae species complex, P. syringae pv. syringae (Pss) strains within PG2 have a reduced repertoire of type III effectors (T3Es) but produce several phytotoxins. Effectors within the cherry ... ...

    Abstract When compared with other phylogroups (PGs) of the Pseudomonas syringae species complex, P. syringae pv. syringae (Pss) strains within PG2 have a reduced repertoire of type III effectors (T3Es) but produce several phytotoxins. Effectors within the cherry pathogen Pss 9644 were grouped based on their frequency in strains from Prunus as the conserved effector locus (CEL) common to most P. syringae pathogens; a core of effectors common to PG2; a set of PRUNUS effectors common to cherry pathogens; and a FLEXIBLE set of T3Es. Pss 9644 also contains gene clusters for biosynthesis of toxins syringomycin, syringopeptin and syringolin A. After confirmation of virulence gene expression, mutants with a sequential series of T3E and toxin deletions were pathogenicity tested on wood, leaves and fruits of sweet cherry (Prunus avium) and leaves of ornamental cherry (Prunus incisa). The toxins had a key role in disease development in fruits but were less important in leaves and wood. An effectorless mutant retained some pathogenicity to fruit but not wood or leaves. Striking redundancy was observed amongst effector groups. The CEL effectors have important roles during the early stages of leaf infection and possibly acted synergistically with toxins in all tissues. Deletion of separate groups of T3Es had more effect in P. incisa than in P. avium. Mixed inocula were used to complement the toxin mutations in trans and indicated that strain mixtures may be important in the field. Our results highlight the niche-specific role of toxins in P. avium tissues and the complexity of effector redundancy in the pathogen Pss 9644.
    MeSH term(s) Virulence/genetics ; Pseudomonas syringae ; Prunus avium/metabolism ; Fruit/metabolism ; Mutation/genetics ; Prunus/metabolism ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism
    Chemical Substances Bacterial Proteins
    Language English
    Publishing date 2024-04-08
    Publishing country England
    Document type Journal Article
    ZDB-ID 2020755-4
    ISSN 1364-3703 ; 1364-3703
    ISSN (online) 1364-3703
    ISSN 1364-3703
    DOI 10.1111/mpp.13451
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  2. Article ; Online: Chromosome-scale genome sequence assemblies of the 'Autumn Bliss' and 'Malling Jewel' cultivars of the highly heterozygous red raspberry (Rubus idaeus L.) derived from long-read Oxford Nanopore sequence data.

    Price, R Jordan / Davik, Jahn / Fernandéz Fernandéz, Felicidad / Bates, Helen J / Lynn, Samantha / Nellist, Charlotte F / Buti, Matteo / Røen, Dag / Šurbanovski, Nada / Alsheikh, Muath / Harrison, Richard J / Sargent, Daniel James

    PloS one

    2023  Volume 18, Issue 5, Page(s) e0285756

    Abstract: Red raspberry (Rubus idaeus L.) is an economically valuable soft-fruit species with a relatively small (~300 Mb) but highly heterozygous diploid (2n = 2x = 14) genome. Chromosome-scale genome sequences are a vital tool in unravelling the genetic ... ...

    Abstract Red raspberry (Rubus idaeus L.) is an economically valuable soft-fruit species with a relatively small (~300 Mb) but highly heterozygous diploid (2n = 2x = 14) genome. Chromosome-scale genome sequences are a vital tool in unravelling the genetic complexity controlling traits of interest in crop plants such as red raspberry, as well as for functional genomics, evolutionary studies, and pan-genomics diversity studies. In this study, we developed genome sequences of a primocane fruiting variety ('Autumn Bliss') and a floricane variety ('Malling Jewel'). The use of long-read Oxford Nanopore Technologies sequencing data yielded long read lengths that permitted well resolved genome sequences for the two cultivars to be assembled. The de novo assemblies of 'Malling Jewel' and 'Autumn Bliss' contained 79 and 136 contigs respectively, and 263.0 Mb of the 'Autumn Bliss' and 265.5 Mb of the 'Malling Jewel' assembly could be anchored unambiguously to a previously published red raspberry genome sequence of the cultivar 'Anitra'. Single copy ortholog analysis (BUSCO) revealed high levels of completeness in both genomes sequenced, with 97.4% of sequences identified in 'Autumn Bliss' and 97.7% in 'Malling Jewel'. The density of repetitive sequence contained in the 'Autumn Bliss' and 'Malling Jewel' assemblies was significantly higher than in the previously published assembly and centromeric and telomeric regions were identified in both assemblies. A total of 42,823 protein coding regions were identified in the 'Autumn Bliss' assembly, whilst 43,027 were identified in the 'Malling Jewel' assembly. These chromosome-scale genome sequences represent an excellent genomics resource for red raspberry, particularly around the highly repetitive centromeric and telomeric regions of the genome that are less complete in the previously published 'Anitra' genome sequence.
    MeSH term(s) Rubus/genetics ; Nanopores ; Genome ; Genomics ; Sequence Analysis, DNA ; Centromere
    Language English
    Publishing date 2023-05-16
    Publishing country United States
    Document type Journal Article
    ZDB-ID 2267670-3
    ISSN 1932-6203 ; 1932-6203
    ISSN (online) 1932-6203
    ISSN 1932-6203
    DOI 10.1371/journal.pone.0285756
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  3. Article: Identifying resistance in wild and ornamental cherry towards bacterial canker caused by Pseudomonas syringae

    Hulin, Michelle T. / Vadillo Dieguez, Andrea / Cossu, Francesca / Lynn, Samantha / Russell, Karen / Neale, Helen C. / Jackson, Robert W. / Arnold, Dawn L. / Mansfield, John W. / Harrison, Richard J.

    Plant pathology. 2022 May, v. 71, no. 4

    2022  

    Abstract: Bacterial canker is a major disease of stone fruits and is a critical limiting factor to sweet cherry (Prunus avium) production worldwide. One important strategy for disease control is the development of resistant varieties. Partial varietal resistance ... ...

    Abstract Bacterial canker is a major disease of stone fruits and is a critical limiting factor to sweet cherry (Prunus avium) production worldwide. One important strategy for disease control is the development of resistant varieties. Partial varietal resistance in sweet cherry is discernible using shoot or whole tree inoculations; however, these quantitative differences in resistance are not evident in detached leaf assays. To identify novel sources of resistance to canker, we used a rapid leaf pathogenicity test to screen a range of wild cherry, ornamental Prunus species and sweet cherry × ornamental cherry hybrids with the canker pathogens, Pseudomonas syringae pvs syringae, morsprunorum races 1 and 2, and avii. Several Prunus accessions exhibited limited symptom development following inoculation with each of the pathogens, and this resistance extended to 16 P. syringae strains pathogenic on sweet cherry and plum. Resistance was associated with reduced bacterial multiplication after inoculation, a phenotype similar to that of commercial sweet cherry towards nonhost strains of P. syringae. Progeny resulting from a cross of a resistant ornamental species Prunus incisa with susceptible sweet cherry (P. avium) exhibited resistance indicating it is an inherited trait. Identification of accessions with resistance to the major bacterial canker pathogens is the first step towards characterizing the underlying genetic mechanisms of resistance and introducing these traits into commercial germplasm.
    Keywords Prunus avium ; Prunus incisa ; Pseudomonas syringae ; bacterial canker ; cherries ; disease control ; germplasm ; leaves ; pathogenicity ; phenotype ; plant pathology ; plums ; progeny ; trees ; varietal resistance
    Language English
    Dates of publication 2022-05
    Size p. 949-965.
    Publishing place John Wiley & Sons, Ltd
    Document type Article
    Note JOURNAL ARTICLE
    ZDB-ID 415941-x
    ISSN 1365-3059 ; 0032-0862
    ISSN (online) 1365-3059
    ISSN 0032-0862
    DOI 10.1111/ppa.13513
    Database NAL-Catalogue (AGRICOLA)

    More links

    Kategorien

  4. Article: Identifying resistance in wild and ornamental cherry towards bacterial canker caused by

    Hulin, Michelle T / Vadillo Dieguez, Andrea / Cossu, Francesca / Lynn, Samantha / Russell, Karen / Neale, Helen C / Jackson, Robert W / Arnold, Dawn L / Mansfield, John W / Harrison, Richard J

    Plant pathology

    2021  Volume 71, Issue 4, Page(s) 949–965

    Abstract: Bacterial canker is a major disease of stone fruits and is a critical limiting factor to sweet cherry ( ...

    Abstract Bacterial canker is a major disease of stone fruits and is a critical limiting factor to sweet cherry (
    Language English
    Publishing date 2021-12-21
    Publishing country England
    Document type Journal Article
    ZDB-ID 415941-x
    ISSN 1365-3059 ; 0032-0862
    ISSN (online) 1365-3059
    ISSN 0032-0862
    DOI 10.1111/ppa.13513
    Database MEDical Literature Analysis and Retrieval System OnLINE

    More links

    Kategorien

  5. Article ; Online: Identifying resistance in wild and ornamental cherry towards bacterial canker caused by Pseudomonas syringae

    Hulin, Michelle T. / Vadillo Dieguez, Andrea / Cossu, Francesca / Lynn, Samantha / Russell, Karen / Neale, Helen C. / Jackson, Robert W. / Arnold, Dawn L. / Mansfield, John W. / Harrison, Richard J.

    Plant Pathology

    2022  Volume 71, Issue 4

    Abstract: Bacterial canker is a major disease of stone fruits and is a critical limiting factor to sweet cherry (Prunus avium) production worldwide. One important strategy for disease control is the development of resistant varieties. Partial varietal resistance ... ...

    Abstract Bacterial canker is a major disease of stone fruits and is a critical limiting factor to sweet cherry (Prunus avium) production worldwide. One important strategy for disease control is the development of resistant varieties. Partial varietal resistance in sweet cherry is discernible using shoot or whole tree inoculations; however, these quantitative differences in resistance are not evident in detached leaf assays. To identify novel sources of resistance to canker, we used a rapid leaf pathogenicity test to screen a range of wild cherry, ornamental Prunus species and sweet cherry × ornamental cherry hybrids with the canker pathogens, Pseudomonas syringae pvs syringae, morsprunorum races 1 and 2, and avii. Several Prunus accessions exhibited limited symptom development following inoculation with each of the pathogens, and this resistance extended to 16 P. syringae strains pathogenic on sweet cherry and plum. Resistance was associated with reduced bacterial multiplication after inoculation, a phenotype similar to that of commercial sweet cherry towards nonhost strains of P. syringae. Progeny resulting from a cross of a resistant ornamental species Prunus incisa with susceptible sweet cherry (P. avium) exhibited resistance indicating it is an inherited trait. Identification of accessions with resistance to the major bacterial canker pathogens is the first step towards characterizing the underlying genetic mechanisms of resistance and introducing these traits into commercial germplasm.
    Keywords Pseudomonas syringae ; disease resistance ; tree disease
    Subject code 571
    Language English
    Publishing country nl
    Document type Article ; Online
    ZDB-ID 415941-x
    ISSN 1365-3059 ; 0032-0862
    ISSN (online) 1365-3059
    ISSN 0032-0862
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

    More links

    Kategorien

To top