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Artikel ; Online: The development of methodological approaches to the residential real estate segmentation by the affordability criterion

Muller Pavel / Chepeleva Kristina / Saenko Irina / Shmeleva Zhanna

E3S Web of Conferences, Vol 208, p

2020 Band 04004

Abstract: The article proposes to consider the issues of the residential real estate objects affordability from the position of differentiation by market segments, taking into account differences in the parameters of objects, as well as differences in the cost of ... ...

Abstract	The article proposes to consider the issues of the residential real estate objects affordability from the position of differentiation by market segments, taking into account differences in the parameters of objects, as well as differences in the cost of objects. The issues of housing affordability are considered both in terms of improving housing conditions through the acquisition and the rent. When calculating affordability coefficients, it is proposed to differentially take into account the difference in the income of the population different groups. The matrix of housing affordability in the Krasnoyarsk market was formed from the point of view of the purchasing and renting possibility. The presented methodological approaches to determining the affordability of the residential real estate objects based on segmentation allow to improve the understanding of the processes taking place in the market, and adjust the main directions of the state’s housing policy. This is an opportunity for the construction business and residential rental sector to implement their offers with a clear focus on the target audience, taking into account the specificity of the local market.
Schlagwörter	Environmental sciences ; GE1-350
Thema/Rubrik (Code)	710
Sprache	Englisch
Erscheinungsdatum	2020-01-01T00:00:00Z
Verlag	EDP Sciences
Dokumenttyp	Artikel ; Online
Datenquelle	BASE - Bielefeld Academic Search Engine (Lebenswissenschaftliche Auswahl)

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Artikel ; Online: Catalytic Mechanism of Fatty Acid Photodecarboxylase: On the Detection and Stability of the Initial Carbonyloxy Radical Intermediate.

Aleksandrov, Alexey / Bonvalet, Adeline / Müller, Pavel / Sorigué, Damien / Beisson, Fred / Antonucci, Laura / Solinas, Xavier / Joffre, Manuel / Vos, Marten H

Angewandte Chemie (International ed. in English)

2024 Band 63, Heft 19, Seite(n) e202401376

Abstract: In fatty acid photodecarboxylase (FAP), light-induced formation of the primary radical product RCOO⋅ from fatty acid ... ...

Abstract	In fatty acid photodecarboxylase (FAP), light-induced formation of the primary radical product RCOO⋅ from fatty acid RCOO
Sprache	Englisch
Erscheinungsdatum	2024-03-28
Erscheinungsland	Germany
Dokumenttyp	Journal Article
ZDB-ID	2011836-3
ISSN	1521-3773 ; 1433-7851
ISSN (online)	1521-3773
ISSN	1433-7851
DOI	10.1002/anie.202401376
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel ; Online: Multiscale Transient Absorption Study of the Fluorescent Protein Dreiklang and Two Point Variants Provides Insight into Photoswitching and Nonproductive Reaction Pathways.

Renouard, Emilie / Nowinska, Magdalena / Lacombat, Fabien / Plaza, Pascal / Müller, Pavel / Espagne, Agathe

The journal of physical chemistry letters

2023 Band 14, Heft 28, Seite(n) 6477–6485

Abstract: Dreiklang is a reversibly photoswitchable fluorescent protein used as a probe in advanced fluorescence imaging. It undergoes a unique and still poorly understood photoswitching mechanism based on the reversible addition of a water molecule to the ... ...

Abstract	Dreiklang is a reversibly photoswitchable fluorescent protein used as a probe in advanced fluorescence imaging. It undergoes a unique and still poorly understood photoswitching mechanism based on the reversible addition of a water molecule to the chromophore. We report the first comprehensive study of the dynamics of this reaction by transient absorption spectroscopy from 100 fs to seconds in the original Dreiklang protein and two point variants. The picture that emerges from our work is that of a competition between photoswitching and nonproductive reaction pathways. We found that photoswitching had a low quantum yield of 0.4%. It involves electron transfer from a tyrosine residue (Tyr203) to the chromophore and is completed in 33 ns. Nonproductive deactivation pathways comprise recombination of a charge transfer intermediate, excited-state proton transfer from the chromophore to a histidine residue (His145), and decay to the ground state via micro-/millisecond-lived intermediates.
Mesh-Begriff(e)	Luminescent Proteins/chemistry ; Spectrum Analysis ; Protons ; Green Fluorescent Proteins/chemistry
Chemische Substanzen	Luminescent Proteins ; Protons ; Green Fluorescent Proteins (147336-22-9)
Sprache	Englisch
Erscheinungsdatum	2023-07-12
Erscheinungsland	United States
Dokumenttyp	Journal Article
ISSN	1948-7185
ISSN (online)	1948-7185
DOI	10.1021/acs.jpclett.3c00431
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel ; Online: Limited solvation of an electron donating tryptophan stabilizes a photoinduced charge-separated state in plant (6-4) photolyase.

Hosokawa, Yuhei / Müller, Pavel / Kitoh-Nishioka, Hirotaka / Iwai, Shigenori / Yamamoto, Junpei

Scientific reports

2022 Band 12, Heft 1, Seite(n) 5084

Abstract: 6-4) Photolyases ((6-4) PLs) are ubiquitous photoenzymes that use the energy of sunlight to catalyze the repair of carcinogenic UV-induced DNA lesions, pyrimidine(6-4)pyrimidone photoproducts. To repair DNA, (6-4) PLs must first undergo so-called ... ...

Abstract	(6-4) Photolyases ((6-4) PLs) are ubiquitous photoenzymes that use the energy of sunlight to catalyze the repair of carcinogenic UV-induced DNA lesions, pyrimidine(6-4)pyrimidone photoproducts. To repair DNA, (6-4) PLs must first undergo so-called photoactivation, in which their excited flavin adenine dinucleotide (FAD) cofactor is reduced in one or two steps to catalytically active FADH
Mesh-Begriff(e)	Arabidopsis/metabolism ; Deoxyribodipyrimidine Photo-Lyase/genetics ; Electron Transport ; Electrons ; Flavin-Adenine Dinucleotide/metabolism ; Oxidation-Reduction ; Tryptophan/metabolism
Chemische Substanzen	Flavin-Adenine Dinucleotide (146-14-5) ; Tryptophan (8DUH1N11BX) ; Deoxyribodipyrimidine Photo-Lyase (EC 4.1.99.3)
Sprache	Englisch
Erscheinungsdatum	2022-03-24
Erscheinungsland	England
Dokumenttyp	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2615211-3
ISSN	2045-2322 ; 2045-2322
ISSN (online)	2045-2322
ISSN	2045-2322
DOI	10.1038/s41598-022-08928-0
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel ; Online: Autocatalytic effect boosts the production of medium-chain hydrocarbons by fatty acid photodecarboxylase.

Samire, Poutoum P / Zhuang, Bo / Légeret, Bertrand / Baca-Porcel, Ángel / Peltier, Gilles / Sorigué, Damien / Aleksandrov, Alexey / Beisson, Frédéric / Müller, Pavel

Science advances

2023 Band 9, Heft 13, Seite(n) eadg3881

Abstract: Ongoing climate change is driving the search for renewable and carbon-neutral alternatives to fossil fuels. Photocatalytic conversion of fatty acids to hydrocarbons by fatty acid photodecarboxylase (FAP) represents a promising route to green fuels. ... ...

Abstract	Ongoing climate change is driving the search for renewable and carbon-neutral alternatives to fossil fuels. Photocatalytic conversion of fatty acids to hydrocarbons by fatty acid photodecarboxylase (FAP) represents a promising route to green fuels. However, the alleged low activity of FAP on C2 to C12 fatty acids seemed to preclude the use for synthesis of gasoline-range hydrocarbons. Here, we reveal that
Mesh-Begriff(e)	Fatty Acids/metabolism ; Caprylates/metabolism ; Gasoline ; Chlorella/metabolism ; Hydrocarbons
Chemische Substanzen	Fatty Acids ; n-heptane (456148SDMJ) ; octanoic acid (OBL58JN025) ; Caprylates ; Gasoline ; Hydrocarbons
Sprache	Englisch
Erscheinungsdatum	2023-03-31
Erscheinungsland	United States
Dokumenttyp	Journal Article
ZDB-ID	2810933-8
ISSN	2375-2548 ; 2375-2548
ISSN (online)	2375-2548
ISSN	2375-2548
DOI	10.1126/sciadv.adg3881
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel ; Online: Searching for the mechanism of signalling by plant photoreceptor cryptochrome.

Müller, Pavel / Bouly, Jean-Pierre

FEBS letters

2015 Band 589, Heft 2, Seite(n) 189–192

Abstract: Even though the plant photoreceptors cryptochromes were discovered more than 20 years ago, the mechanism through which they transduce light signals to their partner molecules such as COP1 (Constitutive Photomorphogenic 1) or SPA1 (Suppressor of ... ...

Abstract	Even though the plant photoreceptors cryptochromes were discovered more than 20 years ago, the mechanism through which they transduce light signals to their partner molecules such as COP1 (Constitutive Photomorphogenic 1) or SPA1 (Suppressor of Phytochrome A) still remains to be established. We propose that a negative charge induced by light in the vicinity of the flavin chromophore initiates cryptochrome 1 signalling. This negative charge might expel the protein-bound ATP from the binding pocket, thereby pushing off the C-terminus that covers the ATP pocket in the dark state of the protein. This conformational change should allow for phosphorylation of previously inaccessible amino acids. A partially phosphorylated 'ESSSSGRR-VPE' fragment of the C-terminus could mimic the sequence of the transcription factor HY5 that is essential for binding to the negative regulator of photomorphogenesis COP1. HY5 release through competition for the COP1 binding site could represent the long-sought connection between light activation of cryptochrome and modulation of photomorphogenesis.
Mesh-Begriff(e)	Cryptochromes/metabolism ; Plant Proteins/chemistry ; Plant Proteins/metabolism ; Plants/chemistry ; Plants/metabolism ; Protein Binding ; Signal Transduction ; Transcription Factors/metabolism
Chemische Substanzen	Cryptochromes ; Plant Proteins ; Transcription Factors
Sprache	Englisch
Erscheinungsdatum	2015-01-16
Erscheinungsland	England
Dokumenttyp	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	212746-5
ISSN	1873-3468 ; 0014-5793
ISSN (online)	1873-3468
ISSN	0014-5793
DOI	10.1016/j.febslet.2014.12.008
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel: Searching for the mechanism of signalling by plant photoreceptor cryptochrome

Müller, Pavel / Jean-Pierre Bouly

Federation of European Biochemical Societies FEBS letters. 2014 Dec. 02,

2014

Abstract: Even though the plant photoreceptors cryptochromes were discovered more than 20years ago, the mechanism through which they transduce light signals to their partner molecules such as COP1 (Constitutive Photomorphogenic 1) or SPA1 (Suppressor of ... ...

Abstract	Even though the plant photoreceptors cryptochromes were discovered more than 20years ago, the mechanism through which they transduce light signals to their partner molecules such as COP1 (Constitutive Photomorphogenic 1) or SPA1 (Suppressor of Phytochrome A) still remains to be established. We propose that a negative charge induced by light in the vicinity of the flavin chromophore initiates cryptochrome 1 signalling. This negative charge might expel the protein-bound ATP from the binding pocket, thereby pushing off the C-terminus that covers the ATP pocket in the dark state of the protein. This conformational change should allow for phosphorylation of previously inaccessible amino acids. A partially phosphorylated ‘ESSSSGRR–VPE’ fragment of the C-terminus could mimic the sequence of the transcription factor HY5 that is essential for binding to the negative regulator of photomorphogenesis COP1. HY5 release through competition for the COP1 binding site could represent the long-sought connection between light activation of cryptochrome and modulation of photomorphogenesis.
Schlagwörter	adenosine triphosphate ; amino acids ; binding sites ; cryptochromes ; phosphorylation ; photomorphogenesis ; photoreceptors ; phytochrome ; transcription factors
Sprache	Englisch
Erscheinungsverlauf	2014-1202
Umfang	p. .
Erscheinungsort	Elsevier B.V.
Dokumenttyp	Artikel
Anmerkung	Pre-press version
ZDB-ID	212746-5
ISSN	1873-3468 ; 0014-5793
ISSN (online)	1873-3468
ISSN	0014-5793
DOI	10.1016/j.febslet.2014.12.008
Datenquelle	NAL Katalog (AGRICOLA)

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Artikel ; Online: Ultrafast photoreduction dynamics of a new class of CPD photolyases.

Lacombat, Fabien / Espagne, Agathe / Dozova, Nadia / Plaza, Pascal / Müller, Pavel / Emmerich, Hans-Joachim / Saft, Martin / Essen, Lars-Oliver

Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology

2021 Band 20, Heft 6, Seite(n) 733–746

Abstract: NewPHL is a recently discovered subgroup of ancestral DNA photolyases. Its domain architecture displays pronounced differences from that of canonical photolyases, in particular at the level of the characteristic electron transfer chain, which is limited ... ...

Abstract	NewPHL is a recently discovered subgroup of ancestral DNA photolyases. Its domain architecture displays pronounced differences from that of canonical photolyases, in particular at the level of the characteristic electron transfer chain, which is limited to merely two tryptophans, instead of the "classical" three or four. Using transient absorption spectroscopy, we show that the dynamics of photoreduction of the oxidized FAD cofactor in the NewPHL begins similarly as that in canonical photolyases, i.e., with a sub-ps primary reduction of the excited FAD cofactor by an adjacent tryptophan, followed by migration of the electron hole towards the second tryptophan in the tens of ps regime. However, the resulting tryptophanyl radical then undergoes an unprecedentedly fast deprotonation in less than 100 ps in the NewPHL. In spite of the stabilization effect of this deprotonation, almost complete charge recombination follows in two phases of ~ 950 ps and ~ 50 ns. Such a rapid recombination of the radical pair implies that the first FAD photoreduction step, i.e., conversion of the fully oxidized to the semi-quinone state, should be rather difficult in vivo. We hence suggest that the flavin chromophore likely switches only between its semi-reduced and fully reduced form in NewPHL under physiological conditions.
Mesh-Begriff(e)	Deoxyribodipyrimidine Photo-Lyase/chemistry ; Deoxyribodipyrimidine Photo-Lyase/metabolism ; Electrons ; Flavins/chemistry ; Flavins/metabolism ; Oxidation-Reduction ; Photochemical Processes ; Thermodynamics ; Tryptophan/chemistry ; Tryptophan/metabolism
Chemische Substanzen	Flavins ; Tryptophan (8DUH1N11BX) ; Deoxyribodipyrimidine Photo-Lyase (EC 4.1.99.3)
Sprache	Englisch
Erscheinungsdatum	2021-05-11
Erscheinungsland	England
Dokumenttyp	Journal Article
ZDB-ID	2072584-X
ISSN	1474-9092 ; 1474-905X
ISSN (online)	1474-9092
ISSN	1474-905X
DOI	10.1007/s43630-021-00048-4
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel ; Online: [Ru(bpy)(3)](2+) as a reference in transient absorption spectroscopy: differential absorption coefficients for formation of the long-lived (3)MLCT excited state.

Müller, Pavel / Brettel, Klaus

Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology

2012 Band 11, Heft 4, Seite(n) 632–636

Abstract: Transient absorption spectroscopy and other time-resolved methods are commonly used to study chemical reactions and biological processes induced by absorption of light. In order to scale the signal amplitude or to compare results obtained under different ...

Abstract	Transient absorption spectroscopy and other time-resolved methods are commonly used to study chemical reactions and biological processes induced by absorption of light. In order to scale the signal amplitude or to compare results obtained under different conditions, it is advisable to use a reference system, a standard of convenient and well-defined properties. Finding Tris(bipyridine)ruthenium(ii), [Ru(bpy)(3)](2+), a suitable candidate for a transient-absorption spectroscopy reference due to its favourable photochemical properties, we have determined accurate relative values of differential molar absorption coefficients (Δε) for light-induced formation of the metal-to-ligand charge transfer (MLCT) excited triplet state at several relevant wavelengths (wavelengths of commercially available lasers) in the UV and visible regions. We have also attempted to determine the absolute value of Δε close to the wavelength of maximum bleaching (∼450 nm) and we propose to narrow down the interval of conceivable values for Δε(450) from the broad range of published values (-0.88 × 10(4) M(-1)cm(-1) to -1.36 × 10(4) M(-1)cm(-1)) to -1.1 × 10(4) M(-1)cm(-1)± 15%. Having ourselves successfully applied [Ru(bpy)(3)](2+) as a standard in a recent time-resolved study of enzymatic DNA repair, we would like to encourage other scientists to use this convenient tool as a reference in their future spectroscopic studies on time scales from picoseconds to hundreds of nanoseconds.
Mesh-Begriff(e)	Absorption ; DNA/metabolism ; DNA Repair ; Ligands ; Light ; Organometallic Compounds/chemistry ; Spectrophotometry
Chemische Substanzen	Ligands ; Organometallic Compounds ; tris(2,2'-bipyridyl)ruthenium(II) ; DNA (9007-49-2)
Sprache	Englisch
Erscheinungsdatum	2012-04
Erscheinungsland	England
Dokumenttyp	Journal Article ; Research Support, Non-U.S. Gov't
ZDB-ID	2072584-X
ISSN	1474-9092 ; 1474-905X
ISSN (online)	1474-9092
ISSN	1474-905X
DOI	10.1039/c2pp05333k
Datenquelle	MEDical Literature Analysis and Retrieval System OnLINE

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Artikel: Ultrafast Oxidation of a Tyrosine by Proton-Coupled Electron Transfer Promotes Light Activation of an Animal-like Cryptochrome

Lacombat, Fabien / Espagne, Agathe / Dozova, Nadia / Plaza, Pascal / Müller, Pavel / Brettel, Klaus / Franz-Badur, Sophie / Essen, Lars-Oliver

Journal of the American Chemical Society. 2019 Aug. 01, v. 141, no. 34

2019

Abstract: The animal-like cryptochrome of Chlamydomonas reinhardtii (CraCRY) is a recently discovered photoreceptor that controls the transcriptional profile and sexual life cycle of this alga by both blue and red light. CraCRY has the uncommon feature of ... ...

Abstract	The animal-like cryptochrome of Chlamydomonas reinhardtii (CraCRY) is a recently discovered photoreceptor that controls the transcriptional profile and sexual life cycle of this alga by both blue and red light. CraCRY has the uncommon feature of efficient formation and longevity of the semireduced neutral form of its FAD cofactor upon blue light illumination. Tyrosine Y373 plays a crucial role by elongating , as fourth member, the electron transfer (ET) chain found in most other cryptochromes and DNA photolyases, which comprises a conserved tryptophan triad. Here, we report the full mechanism of light-induced FADH• formation in CraCRY using transient absorption spectroscopy from hundreds of femtoseconds to seconds. Electron transfer starts from ultrafast reduction of excited FAD to FAD•– by the proximal tryptophan (0.4 ps) and is followed by delocalized migration of the produced WH•+ radical along the tryptophan triad (∼4 and ∼50 ps). Oxidation of Y373 by coupled ET to WH•+ and deprotonation then proceeds in ∼800 ps, without any significant kinetic isotope effect, nor a pH effect between pH 6.5 and 9.0. The FAD•–/Y373• pair is formed with high quantum yield (∼60%); its intrinsic decay by recombination is slow (∼50 ms), favoring reduction of Y373• by extrinsic agents and protonation of FAD•– to form the long-lived, red-light absorbing FADH• species. Possible mechanisms of tyrosine oxidation by ultrafast proton-coupled ET in CraCRY, a process about 40 times faster than the archetypal tyrosine-Z oxidation in photosystem II, are discussed in detail.
Schlagwörter	Chlamydomonas reinhardtii ; algae ; blue light ; cryptochromes ; deoxyribodipyrimidine photo-lyase ; deprotonation ; electron transfer ; isotopes ; lighting ; longevity ; oxidation ; pH ; photoreceptors ; photosystem II ; protonation ; red light ; spectroscopy ; transcription (genetics) ; tryptophan ; tyrosine
Sprache	Englisch
Erscheinungsverlauf	2019-0801
Umfang	p. 13394-13409.
Erscheinungsort	American Chemical Society
Dokumenttyp	Artikel
ZDB-ID	3155-0
ISSN	1520-5126 ; 0002-7863
ISSN (online)	1520-5126
ISSN	0002-7863
DOI	10.1021/jacs.9b03680
Datenquelle	NAL Katalog (AGRICOLA)

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