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  1. Article ; Online: Quantification of functionalised gold nanoparticle-targeted knockdown of gene expression in HeLa cells.

    Meesbah Jiwaji / Mairi E Sandison / Julien Reboud / Ross Stevenson / Rónán Daly / Gráinne Barkess / Karen Faulds / Walter Kolch / Duncan Graham / Mark A Girolami / Jonathan M Cooper / Andrew R Pitt

    PLoS ONE, Vol 9, Iss 6, p e

    2014  Volume 99458

    Abstract: Gene therapy continues to grow as an important area of research, primarily because of its potential in the treatment of disease. One significant area where there is a need for better understanding is in improving the efficiency of oligonucleotide ... ...

    Abstract Gene therapy continues to grow as an important area of research, primarily because of its potential in the treatment of disease. One significant area where there is a need for better understanding is in improving the efficiency of oligonucleotide delivery to the cell and indeed, following delivery, the characterization of the effects on the cell.In this report, we compare different transfection reagents as delivery vehicles for gold nanoparticles functionalized with DNA oligonucleotides, and quantify their relative transfection efficiencies. The inhibitory properties of small interfering RNA (siRNA), single-stranded RNA (ssRNA) and single-stranded DNA (ssDNA) sequences targeted to human metallothionein hMT-IIa are also quantified in HeLa cells. Techniques used in this study include fluorescence and confocal microscopy, qPCR and Western analysis.We show that the use of transfection reagents does significantly increase nanoparticle transfection efficiencies. Furthermore, siRNA, ssRNA and ssDNA sequences all have comparable inhibitory properties to ssDNA sequences immobilized onto gold nanoparticles. We also show that functionalized gold nanoparticles can co-localize with autophagosomes and illustrate other factors that can affect data collection and interpretation when performing studies with functionalized nanoparticles.The desired outcome for biological knockdown studies is the efficient reduction of a specific target; which we demonstrate by using ssDNA inhibitory sequences targeted to human metallothionein IIa gene transcripts that result in the knockdown of both the mRNA transcript and the target protein.
    Keywords Medicine ; R ; Science ; Q
    Subject code 612 ; 500
    Language English
    Publishing date 2014-01-01T00:00:00Z
    Publisher Public Library of Science (PLoS)
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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  2. Article ; Online: Unique reporter-based sensor platforms to monitor signalling in cells.

    Meesbah Jiwaji / Rónán Daly / Abdullah Gibriel / Gráinne Barkess / Pauline McLean / Jingli Yang / Kshama Pansare / Sarah Cumming / Alisha McLauchlan / Piotr J Kamola / Musab S Bhutta / Adam G West / Katherine L West / Walter Kolch / Mark A Girolami / Andrew R Pitt

    PLoS ONE, Vol 7, Iss 11, p e

    2012  Volume 50521

    Abstract: In recent years much progress has been made in the development of tools for systems biology to study the levels of mRNA and protein, and their interactions within cells. However, few multiplexed methodologies are available to study cell signalling ... ...

    Abstract In recent years much progress has been made in the development of tools for systems biology to study the levels of mRNA and protein, and their interactions within cells. However, few multiplexed methodologies are available to study cell signalling directly at the transcription factor level.Here we describe a sensitive, plasmid-based RNA reporter methodology to study transcription factor activation in mammalian cells, and apply this technology to profiling 60 transcription factors in parallel. The methodology uses two robust and easily accessible detection platforms; quantitative real-time PCR for quantitative analysis and DNA microarrays for parallel, higher throughput analysis.We test the specificity of the detection platforms with ten inducers and independently validate the transcription factor activation.We report a methodology for the multiplexed study of transcription factor activation in mammalian cells that is direct and not theoretically limited by the number of available reporters.
    Keywords Medicine ; R ; Science ; Q
    Subject code 306 ; 570
    Language English
    Publishing date 2012-01-01T00:00:00Z
    Publisher Public Library of Science (PLoS)
    Document type Article ; Online
    Database BASE - Bielefeld Academic Search Engine (life sciences selection)

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