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  1. AU="Moor, Julia"
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  1. Article: Dynamics of extended-spectrum cephalosporin-resistant Escherichia coli in pig farms: A longitudinal study

    Moor, Julia / Aebi, Suzanne / Rickli, Susanne / Mostacci, Nadezda / Overesch, Gudrun / Oppliger, Anne / Hilty, Markus

    International journal of antimicrobial agents. 2021 Sept., v. 58, no. 3

    2021  

    Abstract: Point prevalence estimates of extended-spectrum cephalosporin-resistant Escherichia coli (ESC-R-Ec) are important surveillance measures but may not uncover the ESC-R-Ec dynamics within pig farms. A longitudinal study was therefore performed by sampling ... ...

    Abstract Point prevalence estimates of extended-spectrum cephalosporin-resistant Escherichia coli (ESC-R-Ec) are important surveillance measures but may not uncover the ESC-R-Ec dynamics within pig farms. A longitudinal study was therefore performed by sampling individual pigs, pig farmers and the environment.On average, 30 (range 10–46) piglets of 31 Swiss farms were sampled during the suckling, weaning and fattening stages (n= 2437 samples). In addition, stool from pig farmers and environmental samples were obtained and metadata collected by questionnaires. ESC-R-Ec was identified by routine culture, and clonal relationships and resistance genes were derived from whole genome sequencing data.Working on pig farms was not associated with an increased prevalence of ESC-R-Ec in humans. ESC-R-Ec prevalence significantly decreased from 6.2% to 3.9% and 1.8% for the suckling, weaned and fattening pigs, respectively (P < 0.001). Within the 57 ESC-R-positive suckling piglets, persisting carriage was detected in 25 animals at two consecutive time points and one animal at three consecutive time points. Clonal spread (n=7 farms, 22.6%) and horizontal gene transfer (n=1 farm, 3%) within pigs but not between humans and animals was detected. Liquid manure (n=10 samples, 16.7%) was identified as the major environmental reservoir of ESC-R-Ec in the pig farm environment.Pig farming practices like all-in-all-out systems, but not antimicrobial usage, were associated with reduced risk of ESC-R-Ec at the farm level. As carriage duration is normally short within the individual pigs, the risk of recolonisation and clonal spread of ESC-R-Ec might be reduced by applying appropriate decontamination strategies.
    Keywords Escherichia coli ; decontamination ; farms ; horizontal gene transfer ; liquid manure ; longitudinal studies ; metadata ; monitoring ; risk ; risk reduction
    Language English
    Dates of publication 2021-09
    Publishing place Elsevier Ltd
    Document type Article
    ZDB-ID 1093977-5
    ISSN 1872-7913 ; 0924-8579
    ISSN (online) 1872-7913
    ISSN 0924-8579
    DOI 10.1016/j.ijantimicag.2021.106382
    Database NAL-Catalogue (AGRICOLA)

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  2. Article: Kongressbericht. Zehn Thesen für 10 000 Leben. Reanimationsgespräche in Bad Boll

    Moor, Julia Anna

    KU-Gesundheitsmanagement

    2014  Volume 83, Issue 4, Page(s) 73

    Language German
    Document type Article
    ZDB-ID 2420760-3
    ISSN 1867-9269 ; 0023-4508
    Database Current Contents Medicine

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  3. Article ; Online: Influence of pig farming on human Gut Microbiota: role of airborne microbial communities.

    Moor, Julia / Wüthrich, Tsering / Aebi, Suzanne / Mostacci, Nadezda / Overesch, Gudrun / Oppliger, Anne / Hilty, Markus

    Gut microbes

    2021  Volume 13, Issue 1, Page(s) 1–13

    Abstract: It has been hypothesized that both genetics and diet influence the composition of the human cecal microbiota. However, it remains unclear whether and how occupational exposure to microbes impacts the microbial communities in human guts. Using a One ... ...

    Abstract It has been hypothesized that both genetics and diet influence the composition of the human cecal microbiota. However, it remains unclear whether and how occupational exposure to microbes impacts the microbial communities in human guts. Using a One Health approach, we visited pig farms (n = 26) and collected stool specimens from pig workers (n = 59), pig barn air samples (n = 19), and rectal swabs from pigs at three different growth stages (n = 144). Stool samples from cattle workers were included as a control group (n = 22). Each sample's microbiota was characterized using 16S rRNA gene sequencing and the DADA2 pipeline.We obtained a significantly different clustering of the microbial compositions of pig and cattle workers by permutational multivariate analysis of variance (PERMANOVA;
    MeSH term(s) Air/analysis ; Air Microbiology ; Animals ; Bacteria/classification ; Bacteria/genetics ; Bacteria/isolation & purification ; Cattle/growth & development ; Cattle/microbiology ; Farmers ; Farms ; Feces/microbiology ; Gastrointestinal Microbiome ; Gastrointestinal Tract/microbiology ; Humans ; Occupational Exposure/analysis ; Prospective Studies ; Rectum/microbiology ; Swine/growth & development ; Swine/microbiology
    Language English
    Publishing date 2021-06-01
    Publishing country United States
    Document type Journal Article ; Research Support, Non-U.S. Gov't
    ISSN 1949-0984
    ISSN (online) 1949-0984
    DOI 10.1080/19490976.2021.1927634
    Database MEDical Literature Analysis and Retrieval System OnLINE

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  4. Article ; Online: Dynamics of extended-spectrum cephalosporin-resistant Escherichia coli in pig farms: A longitudinal study.

    Moor, Julia / Aebi, Suzanne / Rickli, Susanne / Mostacci, Nadezda / Overesch, Gudrun / Oppliger, Anne / Hilty, Markus

    International journal of antimicrobial agents

    2021  Volume 58, Issue 3, Page(s) 106382

    Abstract: Objectives: Point prevalence estimates of extended-spectrum cephalosporin-resistant Escherichia coli (ESC-R-Ec) are important surveillance measures but may not uncover the ESC-R-Ec dynamics within pig farms. A longitudinal study was therefore performed ... ...

    Abstract Objectives: Point prevalence estimates of extended-spectrum cephalosporin-resistant Escherichia coli (ESC-R-Ec) are important surveillance measures but may not uncover the ESC-R-Ec dynamics within pig farms. A longitudinal study was therefore performed by sampling individual pigs, pig farmers and the environment.
    Methods: On average, 30 (range 10-46) piglets of 31 Swiss farms were sampled during the suckling, weaning and fattening stages (n= 2437 samples). In addition, stool from pig farmers and environmental samples were obtained and metadata collected by questionnaires. ESC-R-Ec was identified by routine culture, and clonal relationships and resistance genes were derived from whole genome sequencing data.
    Results: Working on pig farms was not associated with an increased prevalence of ESC-R-Ec in humans. ESC-R-Ec prevalence significantly decreased from 6.2% to 3.9% and 1.8% for the suckling, weaned and fattening pigs, respectively (P < 0.001). Within the 57 ESC-R-positive suckling piglets, persisting carriage was detected in 25 animals at two consecutive time points and one animal at three consecutive time points. Clonal spread (n=7 farms, 22.6%) and horizontal gene transfer (n=1 farm, 3%) within pigs but not between humans and animals was detected. Liquid manure (n=10 samples, 16.7%) was identified as the major environmental reservoir of ESC-R-Ec in the pig farm environment.
    Conclusions: Pig farming practices like all-in-all-out systems, but not antimicrobial usage, were associated with reduced risk of ESC-R-Ec at the farm level. As carriage duration is normally short within the individual pigs, the risk of recolonisation and clonal spread of ESC-R-Ec might be reduced by applying appropriate decontamination strategies.
    MeSH term(s) Adult ; Aged ; Aged, 80 and over ; Animals ; Anti-Bacterial Agents/therapeutic use ; Cephalosporin Resistance/drug effects ; Cephalosporins/therapeutic use ; Escherichia coli/drug effects ; Escherichia coli/genetics ; Escherichia coli Infections/drug therapy ; Escherichia coli Infections/epidemiology ; Escherichia coli Infections/veterinary ; Farmers/statistics & numerical data ; Farms/statistics & numerical data ; Feces/microbiology ; Female ; Genome-Wide Association Study ; Humans ; Longitudinal Studies ; Male ; Middle Aged ; Occupational Exposure/statistics & numerical data ; Prevalence ; Swine ; Switzerland/epidemiology
    Chemical Substances Anti-Bacterial Agents ; Cephalosporins
    Language English
    Publishing date 2021-06-21
    Publishing country Netherlands
    Document type Journal Article
    ZDB-ID 1093977-5
    ISSN 1872-7913 ; 0924-8579
    ISSN (online) 1872-7913
    ISSN 0924-8579
    DOI 10.1016/j.ijantimicag.2021.106382
    Database MEDical Literature Analysis and Retrieval System OnLINE

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